Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400078699 | Potato | nucleus | 81.6 | 82.35 |
| Solyc02g091810.1.1 | Tomato | nucleus | 53.68 | 55.03 |
| Solyc01g106460.2.1 | Tomato | nucleus | 25.46 | 34.16 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 20.25 | 32.84 |
| CDX89511 | Canola | nucleus | 31.6 | 32.09 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 23.01 | 32.05 |
| AT4G37850.1 | Thale cress | nucleus | 31.9 | 31.71 |
| AT2G22750.3 | Thale cress | nucleus | 32.21 | 31.53 |
| Bra030210.1-P | Field mustard | nucleus | 30.98 | 31.37 |
| CDY25628 | Canola | nucleus | 30.98 | 31.37 |
| CDY13737 | Canola | nucleus | 27.3 | 30.17 |
| Bra039924.1-P | Field mustard | nucleus | 28.83 | 30.03 |
| Solyc06g064590.1.1 | Tomato | nucleus | 25.77 | 29.89 |
| CDX76899 | Canola | nucleus | 29.45 | 29.72 |
| KRH42021 | Soybean | nucleus | 17.48 | 29.23 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 20.25 | 28.95 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 26.07 | 28.81 |
| CDX69336 | Canola | nucleus | 29.75 | 28.7 |
| CDX75679 | Canola | nucleus | 29.45 | 28.57 |
| Bra011790.1-P | Field mustard | nucleus | 29.45 | 28.57 |
| CDY72199 | Canola | nucleus | 29.14 | 28.44 |
| CDY49678 | Canola | nucleus | 29.14 | 28.44 |
| Bra010617.1-P | Field mustard | nucleus | 29.14 | 28.44 |
| Solyc06g064580.1.1 | Tomato | nucleus | 26.38 | 28.29 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 20.25 | 28.21 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 27.91 | 28.09 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 28.22 | 27.54 |
| KXG37671 | Sorghum | nucleus | 29.75 | 27.25 |
| Os03t0725800-01 | Rice | nucleus | 29.45 | 26.74 |
| HORVU4Hr1G009440.2 | Barley | nucleus | 27.91 | 26.69 |
| Solyc02g091800.2.1 | Tomato | nucleus | 28.22 | 26.51 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 26.38 | 26.3 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 26.69 | 26.2 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 25.15 | 26.2 |
| Zm00001d033848_P004 | Maize | nucleus | 29.14 | 26.1 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.77 | 26.09 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 21.17 | 25.94 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 28.53 | 24.87 |
| TraesCS4D01G056900.2 | Wheat | nucleus | 27.91 | 24.27 |
| TraesCS4A01G257900.2 | Wheat | nucleus | 27.91 | 24.14 |
| Zm00001d013370_P001 | Maize | plastid | 27.3 | 23.86 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 23.93 | 23.49 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 13.8 | 22.84 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 23.31 | 22.29 |
| Solyc10g009270.2.1 | Tomato | nucleus | 16.56 | 13.74 |
| Solyc10g009290.1.1 | Tomato | nucleus | 17.48 | 12.64 |
| Solyc08g083170.1.1 | Tomato | extracellular | 14.11 | 11.89 |
| Solyc01g096370.2.1 | Tomato | nucleus | 16.26 | 11.78 |
| Solyc08g008600.2.1 | Tomato | nucleus | 15.95 | 11.5 |
| Solyc06g083980.1.1 | Tomato | nucleus | 16.56 | 11.32 |
| Solyc09g065100.1.1 | Tomato | nucleus | 21.78 | 10.44 |
| Solyc08g076930.1.1 | Tomato | nucleus | 19.33 | 9.14 |
| Solyc05g050560.1.1 | Tomato | nucleus | 15.03 | 8.46 |
| Solyc01g096050.2.1 | Tomato | nucleus | 15.64 | 8.43 |
| Solyc08g005050.2.1 | Tomato | nucleus | 11.96 | 8.41 |
| Solyc08g081140.2.1 | Tomato | nucleus | 14.11 | 7.35 |
Protein Annotations
| EnsemblPlants:Solyc02g091820.1.1 | EnsemblPlantsGene:Solyc02g091820.1 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF48 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0002767B72 | UniProt:K4BCY0 | MapMan:15.5.32 | MapMan:25.4.1.7 | : |
Description
No Description!
Coordinates
chr2:+:53042174..53043816
Molecular Weight (calculated)
36543.9 Da
IEP (calculated)
5.709
GRAVY (calculated)
-0.476
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MDISSATWWS EMDVMNMNEL QYIDQTFDDF AFSDNIQVSQ IGEIFEEKPA LCSSITQNTS TSPPCSSPSV ISFSNSNSPS ATPTTTNAQN YFKNLNTSSL
101: KTEVPSGTTI NFSSSNTSSD SDYDDSKQLF QAMGFGAGQS KKMNYSRTPL QAQDHVLAER KRRERLTQYF VTLSTLIPNL KKLDKASILG DAITYIKQLE
201: EQVKRLDEEA NKQPVKRSRL HSNYDNFSTC NENSNKSVVP EIDVRVSDGN VLIRVCCKKQ AGIIKEIFSQ VEMFQLTITS SSVIPFGYDT THITIVAQMD
301: HQLNMATEQV ANNIRLSIMK LINSHK
101: KTEVPSGTTI NFSSSNTSSD SDYDDSKQLF QAMGFGAGQS KKMNYSRTPL QAQDHVLAER KRRERLTQYF VTLSTLIPNL KKLDKASILG DAITYIKQLE
201: EQVKRLDEEA NKQPVKRSRL HSNYDNFSTC NENSNKSVVP EIDVRVSDGN VLIRVCCKKQ AGIIKEIFSQ VEMFQLTITS SSVIPFGYDT THITIVAQMD
301: HQLNMATEQV ANNIRLSIMK LINSHK
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.