Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010617.1-P | Field mustard | nucleus | 99.4 | 99.4 |
| CDY49678 | Canola | nucleus | 97.6 | 97.6 |
| CDX75679 | Canola | nucleus | 84.43 | 83.93 |
| CDX69336 | Canola | nucleus | 82.04 | 81.07 |
| AT4G37850.1 | Thale cress | nucleus | 76.95 | 78.35 |
| CDX89511 | Canola | nucleus | 59.28 | 61.68 |
| CDY25628 | Canola | nucleus | 58.08 | 60.25 |
| CDY13737 | Canola | nucleus | 52.1 | 58.98 |
| CDX76899 | Canola | nucleus | 55.69 | 57.59 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 28.14 | 46.77 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 27.25 | 38.89 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 30.24 | 37.97 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 33.23 | 37.63 |
| CDX89627 | Canola | nucleus | 29.94 | 37.45 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 37.13 | 37.35 |
| CDX93135 | Canola | nucleus | 29.64 | 37.08 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 36.23 | 36.23 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 35.03 | 36.11 |
| PGSC0003DMT400033757 | Potato | nucleus | 22.46 | 35.71 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 34.43 | 35.17 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.83 | 35.09 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 23.95 | 35.09 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 23.95 | 34.19 |
| CDY13735 | Canola | nucleus | 29.34 | 33.91 |
| CDY52593 | Canola | nucleus | 28.14 | 32.98 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 30.84 | 32.91 |
| KRH42021 | Soybean | nucleus | 18.86 | 32.31 |
| CDX89512 | Canola | nucleus | 28.44 | 32.09 |
| CDY25629 | Canola | nucleus | 28.74 | 32.0 |
| KXG37671 | Sorghum | nucleus | 33.23 | 31.18 |
| Zm00001d033848_P004 | Maize | nucleus | 33.83 | 31.04 |
| CDY52591 | Canola | nucleus | 29.04 | 30.79 |
| Os03t0725800-01 | Rice | nucleus | 32.93 | 30.64 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 17.96 | 30.46 |
| Solyc02g091810.1.1 | Tomato | nucleus | 28.74 | 30.19 |
| HORVU4Hr1G009440.2 | Barley | nucleus | 30.24 | 29.62 |
| CDY25630 | Canola | nucleus | 28.74 | 29.54 |
| Zm00001d013370_P001 | Maize | plastid | 32.93 | 29.49 |
| CDX89513 | Canola | nucleus | 28.44 | 29.23 |
| Solyc02g091820.1.1 | Tomato | nucleus | 28.44 | 29.14 |
| PGSC0003DMT400078699 | Potato | nucleus | 28.14 | 29.1 |
| PGSC0003DMT400078698 | Potato | nucleus | 17.96 | 28.71 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 32.04 | 28.61 |
| TraesCS4D01G056900.2 | Wheat | nucleus | 32.04 | 28.53 |
| TraesCS4A01G257900.2 | Wheat | nucleus | 31.74 | 28.12 |
| Solyc06g064580.1.1 | Tomato | nucleus | 25.45 | 27.96 |
| Solyc06g064590.1.1 | Tomato | nucleus | 22.75 | 27.05 |
| CDX77696 | Canola | nucleus | 8.68 | 24.17 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 23.05 | 23.19 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 23.05 | 22.58 |
| CDY70013 | Canola | nucleus | 15.27 | 20.24 |
| CDX77699 | Canola | nucleus | 13.77 | 16.97 |
| CDY33482 | Canola | nucleus | 13.77 | 16.97 |
| CDX73261 | Canola | nucleus | 20.66 | 15.58 |
| CDY26910 | Canola | nucleus | 20.66 | 15.58 |
| CDX77688 | Canola | nucleus | 19.76 | 14.6 |
| CDY58502 | Canola | nucleus | 18.86 | 14.03 |
| CDX84081 | Canola | nucleus | 22.16 | 13.99 |
| CDY72121 | Canola | nucleus | 12.87 | 13.96 |
| CDY27319 | Canola | nucleus | 17.07 | 12.87 |
| CDY66312 | Canola | nucleus | 17.37 | 12.66 |
| CDY03195 | Canola | nucleus | 19.76 | 12.11 |
| CDY03185 | Canola | nucleus | 17.07 | 12.05 |
| CDY34468 | Canola | nucleus | 16.17 | 11.97 |
| CDY35179 | Canola | nucleus | 20.06 | 11.92 |
| CDY35183 | Canola | nucleus | 17.96 | 11.83 |
| CDY56874 | Canola | nucleus | 17.37 | 11.81 |
| CDY59973 | Canola | nucleus | 17.96 | 11.79 |
| CDX78808 | Canola | nucleus | 20.36 | 11.74 |
| CDX90021 | Canola | nucleus | 18.86 | 11.67 |
| CDY44507 | Canola | nucleus | 20.36 | 11.6 |
| CDY32242 | Canola | nucleus | 15.57 | 11.53 |
| CDX80023 | Canola | nucleus | 16.77 | 11.5 |
| CDY03183 | Canola | nucleus | 17.37 | 11.39 |
| CDX90525 | Canola | nucleus | 14.97 | 10.96 |
| CDY70506 | Canola | nucleus | 15.87 | 9.93 |
| CDY09695 | Canola | nucleus | 14.37 | 9.86 |
| CDX91907 | Canola | nucleus | 15.87 | 9.74 |
| CDX86891 | Canola | nucleus | 14.97 | 9.6 |
| CDX99505 | Canola | nucleus | 14.97 | 9.6 |
| CDY07214 | Canola | mitochondrion, nucleus | 15.27 | 9.41 |
| CDY58950 | Canola | nucleus | 16.17 | 9.36 |
| CDY25513 | Canola | nucleus | 15.87 | 9.19 |
| CDY51155 | Canola | mitochondrion, nucleus | 14.67 | 9.04 |
| CDY39747 | Canola | nucleus | 14.97 | 8.94 |
| CDY34367 | Canola | nucleus | 15.87 | 8.89 |
| CDY08314 | Canola | nucleus | 15.87 | 8.76 |
| CDY70012 | Canola | nucleus | 3.89 | 4.87 |
| CDX77694 | Canola | nucleus | 3.29 | 4.35 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 2.4 | 4.21 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | GO:A0A078JZS5 | UniProt:A0A078JZS5 | EnsemblPlants:CDY72199 |
| ProteinID:CDY72199 | ProteinID:CDY72199.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00025662001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR23042 | PANTHER:PTHR23042:SF100 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE74A9 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g31080DBnaA08g31080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZS5]
Coordinates
chrLK049542:+:146..1406
Molecular Weight (calculated)
38075.7 Da
IEP (calculated)
7.120
GRAVY (calculated)
-0.553
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMFSTRLFS DQELEENGII QQYGMNTIMG EIHEAHHTLP HSFPTRMLTT NDPSYDDLID MKPSKILETT YISPKLQPPP SFPLPPYSKP HFHHQPSSRI
101: LSFENATQNV MDNELSPTYQ NSIFSPKVEA EVPPNWMNGK GTKRAQPLYK SQSNAQDHII AERKRREKLT QRFVALSALV PGLKKMDKAS VLGDAQKHIK
201: YLQEKVGEFE EQKRERRLES MVLVKKSKLI LDDNNQSTSS SCCEDDSSTL DLPEIEVKFS DKDVLIKILC EKQKGHVAKI MAEVEKFHFS ITNSSVLPFG
301: PTLDITIIAK KESDFDMTLM DVVKSLRSAL SKFM
101: LSFENATQNV MDNELSPTYQ NSIFSPKVEA EVPPNWMNGK GTKRAQPLYK SQSNAQDHII AERKRREKLT QRFVALSALV PGLKKMDKAS VLGDAQKHIK
201: YLQEKVGEFE EQKRERRLES MVLVKKSKLI LDDNNQSTSS SCCEDDSSTL DLPEIEVKFS DKDVLIKILC EKQKGHVAKI MAEVEKFHFS ITNSSVLPFG
301: PTLDITIIAK KESDFDMTLM DVVKSLRSAL SKFM
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.