Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033848_P004 | Maize | nucleus | 73.73 | 75.55 |
| Os03t0725800-01 | Rice | nucleus | 68.9 | 71.59 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 66.22 | 66.04 |
| HORVU4Hr1G009440.2 | Barley | nucleus | 59.79 | 65.4 |
| TraesCS4D01G056900.2 | Wheat | nucleus | 65.68 | 65.33 |
| TraesCS4A01G257900.2 | Wheat | nucleus | 64.08 | 63.4 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 31.9 | 59.2 |
| VIT_00s0824g00020.t01 | Wine grape | nucleus | 25.74 | 56.14 |
| VIT_07s0205g00160.t01 | Wine grape | nucleus | 27.61 | 55.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.43 | 50.31 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 38.07 | 48.14 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 42.63 | 47.6 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 41.29 | 47.53 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 41.82 | 46.99 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 40.21 | 45.87 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 32.71 | 45.86 |
| Solyc01g106460.2.1 | Tomato | nucleus | 29.49 | 45.27 |
| CDX89627 | Canola | nucleus | 28.95 | 40.45 |
| VIT_03s0088g01240.t01 | Wine grape | nucleus | 36.73 | 39.83 |
| CDX93135 | Canola | nucleus | 28.42 | 39.7 |
| Bra013128.1-P | Field mustard | nucleus | 28.42 | 39.7 |
| KRH42021 | Soybean | nucleus | 20.11 | 38.46 |
| KRH49880 | Soybean | nucleus | 33.24 | 37.69 |
| Zm00001d038966_P001 | Maize | plastid | 20.38 | 37.25 |
| Zm00001d026009_P001 | Maize | plastid | 20.38 | 37.25 |
| VIT_07s0205g00190.t01 | Wine grape | nucleus | 32.44 | 35.8 |
| Zm00001d028315_P001 | Maize | cytosol | 12.87 | 35.56 |
| CDY13737 | Canola | nucleus | 27.61 | 34.92 |
| CDX89511 | Canola | nucleus | 30.03 | 34.89 |
| PGSC0003DMT400013074 | Potato | nucleus | 32.71 | 34.56 |
| AT2G22750.3 | Thale cress | nucleus | 30.83 | 34.53 |
| KRH10664 | Soybean | nucleus | 34.05 | 34.42 |
| KRH21680 | Soybean | nucleus, vacuole | 34.58 | 34.31 |
| CDY25628 | Canola | nucleus | 29.49 | 34.16 |
| Bra030210.1-P | Field mustard | nucleus | 29.49 | 34.16 |
| VIT_07s0205g00180.t01 | Wine grape | nucleus | 31.9 | 34.0 |
| Bra039924.1-P | Field mustard | nucleus | 28.42 | 33.87 |
| VIT_00s1314g00010.t01 | Wine grape | nucleus | 30.29 | 33.83 |
| AT4G37850.1 | Thale cress | nucleus | 29.49 | 33.54 |
| CDX75679 | Canola | nucleus | 30.03 | 33.33 |
| Bra011790.1-P | Field mustard | nucleus | 30.03 | 33.33 |
| CDX76899 | Canola | nucleus | 28.69 | 33.13 |
| Bra010617.1-P | Field mustard | nucleus | 29.49 | 32.93 |
| CDY72199 | Canola | nucleus | 29.49 | 32.93 |
| CDY49678 | Canola | nucleus | 29.49 | 32.93 |
| CDX69336 | Canola | nucleus | 29.76 | 32.84 |
| Zm00001d033413_P001 | Maize | nucleus | 27.61 | 32.39 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 19.03 | 31.14 |
| PGSC0003DMT400033757 | Potato | nucleus | 17.43 | 30.95 |
| Zm00001d033407_P001 | Maize | nucleus | 28.69 | 30.06 |
| Zm00001d033412_P001 | Maize | nucleus | 28.95 | 29.27 |
| PGSC0003DMT400078698 | Potato | nucleus | 16.09 | 28.71 |
| Zm00001d003604_P001 | Maize | nucleus | 25.74 | 28.57 |
| Solyc06g064590.1.1 | Tomato | nucleus | 21.45 | 28.47 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 17.43 | 27.78 |
| Solyc02g091810.1.1 | Tomato | nucleus | 23.59 | 27.67 |
| Zm00001d028312_P001 | Maize | nucleus | 23.59 | 27.5 |
| Solyc02g091820.1.1 | Tomato | nucleus | 23.86 | 27.3 |
| Zm00001d025462_P001 | Maize | nucleus | 24.13 | 27.27 |
| PGSC0003DMT400078699 | Potato | nucleus | 23.06 | 26.63 |
| Zm00001d024781_P001 | Maize | nucleus | 24.93 | 26.35 |
| Zm00001d031167_P002 | Maize | nucleus | 27.08 | 25.7 |
| Solyc06g064580.1.1 | Tomato | nucleus | 20.91 | 25.66 |
| Zm00001d030232_P001 | Maize | nucleus | 20.91 | 24.38 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 12.87 | 24.37 |
| Zm00001d028314_P001 | Maize | nucleus | 10.72 | 21.39 |
| Zm00001d052728_P001 | Maize | nucleus | 15.01 | 20.36 |
| Zm00001d031717_P001 | Maize | nucleus | 12.6 | 18.5 |
| Zm00001d006150_P001 | Maize | nucleus | 14.21 | 18.21 |
| Zm00001d021164_P001 | Maize | nucleus | 12.87 | 16.55 |
| Zm00001d043706_P001 | Maize | nucleus | 15.82 | 12.63 |
| Zm00001d009013_P001 | Maize | nucleus | 17.16 | 10.47 |
| Zm00001d039271_P001 | Maize | nucleus | 16.89 | 10.23 |
| Zm00001d047017_P001 | Maize | nucleus | 18.5 | 9.82 |
| Zm00001d000236_P001 | Maize | nucleus, plastid | 14.21 | 9.52 |
| Zm00001d030028_P001 | Maize | nucleus | 17.96 | 9.5 |
| Zm00001d026147_P002 | Maize | nucleus | 15.28 | 9.25 |
| Zm00001d019170_P001 | Maize | nucleus | 14.21 | 7.86 |
| Zm00001d007536_P001 | Maize | plastid | 9.12 | 5.6 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | UniProt:A0A1D6GIG8 | ProteinID:AQK63230.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF48 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0008457832 | EnsemblPlantsGene:Zm00001d013370 | EnsemblPlants:Zm00001d013370_P001 | EnsemblPlants:Zm00001d013370_T001 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
bHLH-transcription factor 18Symbiotic ammonium transporter
Coordinates
chr5:+:9971912..9974426
Molecular Weight (calculated)
40229.7 Da
IEP (calculated)
6.425
GRAVY (calculated)
-0.268
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MATQWFSNMV SPSVTALSPA VPFHGPPAAE CALFLACRRA QVVDEPSFFH QWQSDALLEQ YTEQQIAVAF GGHGGLDLDL DLDLDHGVAT PPPLQRVPAP
101: AADHRPRKAA RGNASWDSCV TEQGSPDDYS SPTILSFAGH HAKAPKQELL DAAAAALPSF QQARPAPKRS YDDMMAEAAR SPAAAARPAS QNQDHILAER
201: KRREKLSQRF IALSKIVPGL KKMDKASVLG DAIKYVKQLQ DQVKGLEDDA RRRPVEAAVL VKKSQLSADD DEGSSCDDNS VGAEASATLL PEIEARLSGR
301: TVLVRVHCDN RKGVLIAALS EVERLGLSVM NTNVLPFTAS SLDITIMAMA GDDFCLSAKD IVKKLNQAFK SPF
101: AADHRPRKAA RGNASWDSCV TEQGSPDDYS SPTILSFAGH HAKAPKQELL DAAAAALPSF QQARPAPKRS YDDMMAEAAR SPAAAARPAS QNQDHILAER
201: KRREKLSQRF IALSKIVPGL KKMDKASVLG DAIKYVKQLQ DQVKGLEDDA RRRPVEAAVL VKKSQLSADD DEGSSCDDNS VGAEASATLL PEIEARLSGR
301: TVLVRVHCDN RKGVLIAALS EVERLGLSVM NTNVLPFTAS SLDITIMAMA GDDFCLSAKD IVKKLNQAFK SPF
001: MNVFSTKWSS ELDIEEYSII HQFHMNSLVG DVPQSLSSLD DTTTCYNLDA SCNKSLVEER PSKILKTTHI SPNLHPFSSS NPPPPKHQPS SRILSFEKTG
101: LHVMNHNSPN LIFSPKDEEI GLPEHKKAEL IIRGTKRAQS LTRSQSNAQD HILAERKRRE KLTQRFVALS ALIPGLKKMD KASVLGDAIK HIKYLQESVK
201: EYEEQKKEKT MESVVLVKKS SLVLDENHQP SSSSSSDGNR NSSSSNLPEI EVRVSGKDVL IKILCEKQKG NVIKIMGEIE KLGLSITNSN VLPFGPTFDI
301: SIIAQKNNNF DMKIEDVVKN LSFGLSKLT
101: LHVMNHNSPN LIFSPKDEEI GLPEHKKAEL IIRGTKRAQS LTRSQSNAQD HILAERKRRE KLTQRFVALS ALIPGLKKMD KASVLGDAIK HIKYLQESVK
201: EYEEQKKEKT MESVVLVKKS SLVLDENHQP SSSSSSDGNR NSSSSNLPEI EVRVSGKDVL IKILCEKQKG NVIKIMGEIE KLGLSITNSN VLPFGPTFDI
301: SIIAQKNNNF DMKIEDVVKN LSFGLSKLT
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G22750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.