Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37671 | Sorghum | nucleus | 88.74 | 90.73 |
| Os03t0725800-01 | Rice | nucleus | 78.3 | 79.39 |
| Zm00001d013370_P001 | Maize | plastid | 75.55 | 73.73 |
| HORVU4Hr1G009440.2 | Barley | nucleus | 68.96 | 73.61 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 74.18 | 72.19 |
| TraesCS4A01G257900.2 | Wheat | nucleus | 73.9 | 71.35 |
| TraesCS4D01G056900.2 | Wheat | nucleus | 72.8 | 70.67 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 33.24 | 60.2 |
| VIT_07s0205g00160.t01 | Wine grape | nucleus | 29.67 | 58.06 |
| VIT_00s0824g00020.t01 | Wine grape | nucleus | 26.37 | 56.14 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.7 | 52.8 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 46.98 | 51.2 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 40.93 | 50.51 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 44.78 | 50.31 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 45.6 | 50.0 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 43.41 | 48.32 |
| Solyc01g106460.2.1 | Tomato | nucleus | 31.32 | 46.91 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 34.07 | 46.62 |
| VIT_03s0088g01240.t01 | Wine grape | nucleus | 40.11 | 42.44 |
| CDX89627 | Canola | nucleus | 30.49 | 41.57 |
| Bra013128.1-P | Field mustard | nucleus | 29.95 | 40.82 |
| CDX93135 | Canola | nucleus | 29.67 | 40.45 |
| KRH42021 | Soybean | nucleus | 21.43 | 40.0 |
| Zm00001d038966_P001 | Maize | plastid | 21.7 | 38.73 |
| Zm00001d026009_P001 | Maize | plastid | 21.7 | 38.73 |
| KRH49880 | Soybean | nucleus | 34.07 | 37.69 |
| CDX89511 | Canola | nucleus | 32.42 | 36.76 |
| VIT_07s0205g00190.t01 | Wine grape | nucleus | 34.07 | 36.69 |
| CDY13737 | Canola | nucleus | 29.67 | 36.61 |
| VIT_07s0205g00180.t01 | Wine grape | nucleus | 35.16 | 36.57 |
| VIT_00s1314g00010.t01 | Wine grape | nucleus | 33.52 | 36.53 |
| Zm00001d028315_P001 | Maize | cytosol | 13.46 | 36.3 |
| CDY25628 | Canola | nucleus | 31.87 | 36.02 |
| Bra030210.1-P | Field mustard | nucleus | 31.87 | 36.02 |
| PGSC0003DMT400013074 | Potato | nucleus | 34.89 | 35.98 |
| AT2G22750.3 | Thale cress | nucleus | 32.69 | 35.74 |
| CDX76899 | Canola | nucleus | 31.59 | 35.6 |
| Bra039924.1-P | Field mustard | nucleus | 30.49 | 35.46 |
| AT4G37850.1 | Thale cress | nucleus | 31.87 | 35.37 |
| KRH10664 | Soybean | nucleus | 35.44 | 34.96 |
| KRH21680 | Soybean | nucleus, vacuole | 35.99 | 34.84 |
| Bra011790.1-P | Field mustard | nucleus | 31.87 | 34.52 |
| CDX75679 | Canola | nucleus | 31.87 | 34.52 |
| CDX69336 | Canola | nucleus | 31.87 | 34.32 |
| Bra010617.1-P | Field mustard | nucleus | 31.04 | 33.83 |
| CDY72199 | Canola | nucleus | 31.04 | 33.83 |
| CDY49678 | Canola | nucleus | 31.04 | 33.83 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 20.88 | 33.33 |
| Zm00001d033407_P001 | Maize | nucleus | 31.87 | 32.58 |
| Zm00001d033413_P001 | Maize | nucleus | 28.02 | 32.08 |
| PGSC0003DMT400033757 | Potato | nucleus | 18.41 | 31.9 |
| Solyc06g064590.1.1 | Tomato | nucleus | 22.8 | 29.54 |
| Zm00001d003604_P001 | Maize | nucleus | 27.2 | 29.46 |
| Zm00001d033412_P001 | Maize | nucleus | 29.67 | 29.27 |
| Solyc02g091820.1.1 | Tomato | nucleus | 26.1 | 29.14 |
| Solyc02g091810.1.1 | Tomato | nucleus | 25.27 | 28.93 |
| PGSC0003DMT400078698 | Potato | nucleus | 16.48 | 28.71 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 18.41 | 28.63 |
| Zm00001d025462_P001 | Maize | nucleus | 25.27 | 27.88 |
| PGSC0003DMT400078699 | Potato | nucleus | 24.73 | 27.86 |
| Zm00001d028312_P001 | Maize | nucleus | 24.45 | 27.81 |
| Solyc06g064580.1.1 | Tomato | nucleus | 23.08 | 27.63 |
| Zm00001d024781_P001 | Maize | nucleus | 26.1 | 26.91 |
| Zm00001d031167_P002 | Maize | nucleus | 28.85 | 26.72 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 14.29 | 26.4 |
| Zm00001d030232_P001 | Maize | nucleus | 21.98 | 25.0 |
| Zm00001d028314_P001 | Maize | nucleus | 10.99 | 21.39 |
| Zm00001d052728_P001 | Maize | nucleus | 14.29 | 18.91 |
| Zm00001d031717_P001 | Maize | nucleus | 12.09 | 17.32 |
| Zm00001d006150_P001 | Maize | nucleus | 13.46 | 16.84 |
| Zm00001d021164_P001 | Maize | nucleus | 13.19 | 16.55 |
| Zm00001d043706_P001 | Maize | nucleus | 15.11 | 11.78 |
| Zm00001d000236_P001 | Maize | nucleus, plastid | 15.66 | 10.23 |
| Zm00001d009013_P001 | Maize | nucleus | 17.03 | 10.15 |
| Zm00001d039271_P001 | Maize | nucleus | 17.03 | 10.06 |
| Zm00001d047017_P001 | Maize | nucleus | 18.41 | 9.53 |
| Zm00001d026147_P002 | Maize | nucleus | 15.93 | 9.42 |
| Zm00001d030028_P001 | Maize | nucleus | 17.31 | 8.94 |
| Zm00001d019170_P001 | Maize | nucleus | 15.11 | 8.16 |
| Zm00001d007536_P001 | Maize | plastid | 8.79 | 5.27 |
Protein Annotations
| EntrezGene:100194106 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | UniProt:B4FHG4 | EMBL:BT036552 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | EMBL:KJ726863 | ProteinID:ONM08772.1 | ProteinID:ONM08775.1 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF48 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0001A595D0 |
| EnsemblPlantsGene:Zm00001d033848 | EnsemblPlants:Zm00001d033848_P004 | EnsemblPlants:Zm00001d033848_T004 | InterPro:bHLH_dom | SEG:seg | : |
Description
bHLH-transcription factor 137Transcription factor bHLH18
Coordinates
chr1:-:275704805..275707378
Molecular Weight (calculated)
39507.8 Da
IEP (calculated)
6.318
GRAVY (calculated)
-0.350
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MATQWFSNMV MDEPSFFHQW QSDTLLEQYT EQQIAVAFGQ GEPVDHAVAA ALATAMPMQL QQPAAAEQPH HRPRKAAKVN TSWDSCITEQ GSPAADSSSP
101: TILSFGGHTA FAKAEPTTHQ PPSCAGYYGA AAAAAKAPKQ EMMDAAAMPP FQQARPAKRS YDDMAAVAEA ANAPSANTRP ASQNQDHILA ERKRREKLSQ
201: RFIALSKIVP GLKKMDKASV LGDAIKYVKQ LQDQVKGLED DARRRPVEAA VLVKKSQLSA DDDEGSSCDE NFVATEASGT LPEIEARVSD RTVLVRIHCE
301: NRKGVLIAAL SEVERLGLSI MNTNVLPFTA SSLDITIMAM AGDDFCWSVK DIVKKLNQAF KSSF
101: TILSFGGHTA FAKAEPTTHQ PPSCAGYYGA AAAAAKAPKQ EMMDAAAMPP FQQARPAKRS YDDMAAVAEA ANAPSANTRP ASQNQDHILA ERKRREKLSQ
201: RFIALSKIVP GLKKMDKASV LGDAIKYVKQ LQDQVKGLED DARRRPVEAA VLVKKSQLSA DDDEGSSCDE NFVATEASGT LPEIEARVSD RTVLVRIHCE
301: NRKGVLIAAL SEVERLGLSI MNTNVLPFTA SSLDITIMAM AGDDFCWSVK DIVKKLNQAF KSSF
001: MATAMNVFST KWSSELDIEE YSIIHQFHMN SLVGDVPQSL SSLDDTTTCY NLDASCNKSL VEERPSKILK TTHISPNLHP FSSSNPPPPK HQPSSRILSF
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQK NNNFDMKIED VVKNLSFGLS KLT
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQK NNNFDMKIED VVKNLSFGLS KLT
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G22750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.