Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P05170_001 | Banana | nucleus | 47.74 | 63.18 |
| VIT_00s0824g00020.t01 | Wine grape | nucleus | 37.22 | 57.89 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 59.4 | 53.56 |
| GSMUA_AchrUn_... | Banana | nucleus | 64.66 | 53.42 |
| VIT_07s0205g00160.t01 | Wine grape | nucleus | 36.47 | 52.15 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 64.29 | 51.51 |
| Solyc01g106460.2.1 | Tomato | nucleus | 42.11 | 46.09 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 55.64 | 45.68 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 57.14 | 45.51 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 39.1 | 44.44 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 53.38 | 43.43 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 46.62 | 39.62 |
| CDY13737 | Canola | nucleus | 39.47 | 35.59 |
| PGSC0003DMT400013074 | Potato | nucleus | 46.62 | 35.13 |
| VIT_00s1314g00010.t01 | Wine grape | nucleus | 43.98 | 35.03 |
| VIT_03s0088g01240.t01 | Wine grape | nucleus | 45.11 | 34.88 |
| KXG37671 | Sorghum | nucleus | 46.62 | 34.83 |
| VIT_07s0205g00190.t01 | Wine grape | nucleus | 43.61 | 34.32 |
| Zm00001d033848_P004 | Maize | nucleus | 46.62 | 34.07 |
| Os03t0725800-01 | Rice | nucleus | 45.49 | 33.7 |
| Bra039924.1-P | Field mustard | nucleus | 39.47 | 33.55 |
| Bra013128.1-P | Field mustard | nucleus | 33.46 | 33.33 |
| CDX93135 | Canola | nucleus | 33.08 | 32.96 |
| CDX89627 | Canola | nucleus | 33.08 | 32.96 |
| Zm00001d013370_P001 | Maize | plastid | 45.86 | 32.71 |
| KRH49880 | Soybean | nucleus | 39.85 | 32.22 |
| KRH10664 | Soybean | nucleus | 44.36 | 31.98 |
| CDX76899 | Canola | nucleus | 38.72 | 31.89 |
| KRH42021 | Soybean | nucleus | 23.31 | 31.79 |
| VIT_07s0205g00180.t01 | Wine grape | nucleus | 41.73 | 31.71 |
| AT4G37850.1 | Thale cress | nucleus | 39.1 | 31.71 |
| CDY25628 | Canola | nucleus | 38.35 | 31.68 |
| AT2G22750.3 | Thale cress | nucleus | 39.1 | 31.23 |
| CDX89511 | Canola | nucleus | 37.59 | 31.15 |
| KRH21680 | Soybean | nucleus, vacuole | 43.98 | 31.12 |
| Bra030210.1-P | Field mustard | nucleus | 37.59 | 31.06 |
| HORVU4Hr1G009440.2 | Barley | nucleus | 39.47 | 30.79 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 42.86 | 30.48 |
| TraesCS4D01G056900.2 | Wheat | nucleus | 42.86 | 30.4 |
| Bra010617.1-P | Field mustard | nucleus | 37.97 | 30.24 |
| CDY72199 | Canola | nucleus | 37.97 | 30.24 |
| CDX69336 | Canola | nucleus | 38.35 | 30.18 |
| Bra011790.1-P | Field mustard | nucleus | 37.97 | 30.06 |
| CDX75679 | Canola | nucleus | 37.97 | 30.06 |
| TraesCS4A01G257900.2 | Wheat | nucleus | 42.11 | 29.71 |
| CDY49678 | Canola | nucleus | 37.22 | 29.64 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 24.44 | 28.51 |
| PGSC0003DMT400033757 | Potato | nucleus | 22.18 | 28.1 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 24.06 | 27.35 |
| Solyc06g064590.1.1 | Tomato | nucleus | 27.07 | 25.62 |
| Solyc02g091810.1.1 | Tomato | nucleus | 30.45 | 25.47 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 31.2 | 25.0 |
| PGSC0003DMT400078698 | Potato | nucleus | 18.8 | 23.92 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 30.45 | 23.75 |
| Solyc06g064580.1.1 | Tomato | nucleus | 26.32 | 23.03 |
| PGSC0003DMT400078699 | Potato | nucleus | 26.69 | 21.98 |
| Solyc02g091820.1.1 | Tomato | nucleus | 25.94 | 21.17 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 15.04 | 20.3 |
| GSMUA_Achr10P... | Banana | nucleus | 21.43 | 14.29 |
| GSMUA_Achr1P18910_001 | Banana | nucleus | 20.3 | 13.71 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 22.56 | 13.3 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 23.68 | 13.26 |
| GSMUA_Achr9P20820_001 | Banana | nucleus | 17.67 | 12.77 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 22.18 | 12.74 |
| GSMUA_Achr2P18140_001 | Banana | nucleus | 21.43 | 12.28 |
| GSMUA_Achr11P... | Banana | nucleus | 20.68 | 12.28 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 22.93 | 12.27 |
| GSMUA_Achr10P... | Banana | nucleus | 21.05 | 12.2 |
| GSMUA_Achr4P16980_001 | Banana | nucleus | 22.56 | 11.83 |
| GSMUA_Achr3P00370_001 | Banana | plastid | 19.55 | 11.82 |
| GSMUA_Achr7P04720_001 | Banana | nucleus | 20.3 | 11.51 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 24.81 | 11.48 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 20.3 | 11.16 |
| GSMUA_Achr11P... | Banana | nucleus | 19.55 | 11.04 |
| GSMUA_Achr3P17620_001 | Banana | nucleus | 22.93 | 10.82 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 19.92 | 10.79 |
| GSMUA_Achr11P... | Banana | nucleus | 22.93 | 10.29 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 21.05 | 10.26 |
| GSMUA_Achr11P... | Banana | nucleus | 20.68 | 9.96 |
| GSMUA_Achr8P14720_001 | Banana | nucleus | 21.8 | 9.91 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 21.05 | 9.52 |
| GSMUA_AchrUn_... | Banana | cytosol | 18.42 | 9.48 |
| GSMUA_Achr1P08130_001 | Banana | mitochondrion | 19.55 | 9.32 |
| GSMUA_Achr5P18100_001 | Banana | nucleus | 16.92 | 9.2 |
| GSMUA_Achr11P... | Banana | nucleus | 16.54 | 9.15 |
| GSMUA_Achr6P21490_001 | Banana | nucleus | 21.8 | 8.91 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSMUA_Achr2G08590_001 | EnsemblPlants:GSMUA_Achr2P08590_001 | EnsemblPlants:GSMUA_Achr2T08590_001 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | UniProt:M0S6A0 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 |
| PANTHER:PTHR23042:SF100 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000296F272 | InterPro:bHLH_dom | SEG:seg |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G08590_001]
Coordinates
chr2:+:12532662..12533667
Molecular Weight (calculated)
29649.0 Da
IEP (calculated)
9.632
GRAVY (calculated)
-0.290
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQSSFKRWE LSALDQFSAQ QLEVALGSPS SESYTSLPSC HPPNEIVTAA WHSDLHDGAA ATAKMKAEMK DVLVLDGSKR KWDIMIRHGT KRPSMGNSSA
101: SHNQEHVMAE RKRREKLTQR FIALSAVVPG LKKMDKASVL GDAIKYLKQL QEKVKSLEDQ VAKRNTESTV LAKRSYDERQ RCGSLLVEIE ARVFQKSILI
201: KIHCENQKGV LVKALSEIEK LHLSVICTSA MSFAISSLDI TVMTQASLEF CMTAKDLVKK LNSALM
101: SHNQEHVMAE RKRREKLTQR FIALSAVVPG LKKMDKASVL GDAIKYLKQL QEKVKSLEDQ VAKRNTESTV LAKRSYDERQ RCGSLLVEIE ARVFQKSILI
201: KIHCENQKGV LVKALSEIEK LHLSVICTSA MSFAISSLDI TVMTQASLEF CMTAKDLVKK LNSALM
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.