Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0824g00020.t01 | Wine grape | nucleus | 42.31 | 57.89 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 76.07 | 56.87 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 47.44 | 55.22 |
| VIT_07s0205g00160.t01 | Wine grape | nucleus | 42.73 | 53.76 |
| Solyc01g106460.2.1 | Tomato | nucleus | 48.29 | 46.5 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 44.44 | 39.1 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 53.85 | 37.72 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 47.44 | 37.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 51.28 | 37.27 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 51.28 | 36.14 |
| VIT_03s0088g01240.t01 | Wine grape | nucleus | 52.99 | 36.05 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 49.15 | 35.49 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 49.15 | 35.17 |
| CDX89627 | Canola | nucleus | 39.74 | 34.83 |
| Bra013128.1-P | Field mustard | nucleus | 39.74 | 34.83 |
| CDX93135 | Canola | nucleus | 39.32 | 34.46 |
| PGSC0003DMT400013074 | Potato | nucleus | 48.72 | 32.29 |
| VIT_00s1314g00010.t01 | Wine grape | nucleus | 45.3 | 31.74 |
| KRH49880 | Soybean | nucleus | 44.02 | 31.31 |
| CDY13737 | Canola | nucleus | 39.32 | 31.19 |
| VIT_07s0205g00190.t01 | Wine grape | nucleus | 44.87 | 31.07 |
| PGSC0003DMT400033757 | Potato | nucleus | 26.92 | 30.0 |
| KRH10664 | Soybean | nucleus | 46.58 | 29.54 |
| KRH21680 | Soybean | nucleus, vacuole | 47.44 | 29.52 |
| Bra039924.1-P | Field mustard | nucleus | 39.32 | 29.39 |
| VIT_07s0205g00180.t01 | Wine grape | nucleus | 43.59 | 29.14 |
| AT2G22750.3 | Thale cress | nucleus | 41.03 | 28.83 |
| CDX76899 | Canola | nucleus | 39.74 | 28.79 |
| CDX89511 | Canola | nucleus | 39.32 | 28.66 |
| AT4G37850.1 | Thale cress | nucleus | 40.17 | 28.66 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 28.63 | 28.63 |
| Bra011790.1-P | Field mustard | nucleus | 40.6 | 28.27 |
| CDX75679 | Canola | nucleus | 40.6 | 28.27 |
| CDY25628 | Canola | nucleus | 38.46 | 27.95 |
| KRH42021 | Soybean | nucleus | 23.08 | 27.69 |
| Bra030210.1-P | Field mustard | nucleus | 38.03 | 27.64 |
| Bra010617.1-P | Field mustard | nucleus | 38.89 | 27.25 |
| CDY49678 | Canola | nucleus | 38.89 | 27.25 |
| CDY72199 | Canola | nucleus | 38.89 | 27.25 |
| CDX69336 | Canola | nucleus | 38.89 | 26.92 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 37.18 | 26.2 |
| Solyc02g091810.1.1 | Tomato | nucleus | 32.48 | 23.9 |
| PGSC0003DMT400078699 | Potato | nucleus | 32.91 | 23.84 |
| Solyc02g091820.1.1 | Tomato | nucleus | 32.05 | 23.01 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 22.22 | 22.81 |
| PGSC0003DMT400078698 | Potato | nucleus | 20.09 | 22.49 |
| Solyc06g064580.1.1 | Tomato | nucleus | 29.06 | 22.37 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 32.05 | 21.99 |
| Solyc06g064590.1.1 | Tomato | nucleus | 26.07 | 21.71 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 12.82 | 15.23 |
| GSMUA_Achr10P... | Banana | nucleus | 20.51 | 12.03 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 21.79 | 11.02 |
| GSMUA_Achr1P18910_001 | Banana | nucleus | 18.38 | 10.91 |
| GSMUA_Achr2P18140_001 | Banana | nucleus | 21.37 | 10.78 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 20.51 | 10.64 |
| GSMUA_Achr11P... | Banana | nucleus | 19.66 | 10.27 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 20.51 | 10.11 |
| GSMUA_Achr7P04720_001 | Banana | nucleus | 19.66 | 9.81 |
| GSMUA_Achr11P... | Banana | nucleus | 19.23 | 9.55 |
| GSMUA_Achr3P00370_001 | Banana | plastid | 17.95 | 9.55 |
| GSMUA_Achr9P20820_001 | Banana | nucleus | 14.96 | 9.51 |
| GSMUA_Achr10P... | Banana | nucleus | 18.38 | 9.37 |
| GSMUA_Achr4P16980_001 | Banana | nucleus | 19.66 | 9.07 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 18.38 | 8.88 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 18.8 | 8.85 |
| GSMUA_Achr11P... | Banana | nucleus | 22.22 | 8.77 |
| GSMUA_AchrUn_... | Banana | cytosol | 17.95 | 8.12 |
| GSMUA_Achr8P14720_001 | Banana | nucleus | 20.09 | 8.03 |
| GSMUA_Achr11P... | Banana | nucleus | 18.8 | 7.97 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 19.23 | 7.83 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 19.23 | 7.65 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 15.81 | 7.54 |
| GSMUA_Achr11P... | Banana | nucleus | 15.38 | 7.48 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 17.09 | 7.33 |
| GSMUA_Achr3P17620_001 | Banana | nucleus | 17.52 | 7.27 |
| GSMUA_Achr1P08130_001 | Banana | mitochondrion | 16.67 | 6.99 |
| GSMUA_Achr5P18100_001 | Banana | nucleus | 14.53 | 6.95 |
| GSMUA_Achr6P21490_001 | Banana | nucleus | 15.81 | 5.68 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSMUA_Achr7G00800_001 | EnsemblPlants:GSMUA_Achr7P00800_001 | EnsemblPlants:GSMUA_Achr7T00800_001 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | UniProt:M0TDM0 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11514 |
| PANTHER:PTHR11514:SF48 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002952C1A | InterPro:bHLH_dom | SEG:seg |
Description
Putative Transcription factor bHLH25 [Source:GMGC_GENE;Acc:GSMUA_Achr7G00800_001]
Coordinates
chr7:-:651558..652837
Molecular Weight (calculated)
25462.6 Da
IEP (calculated)
8.474
GRAVY (calculated)
-0.300
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPDASFPAP LLHVPGVSTK PKEEMRVPAA GGKHEAVLHR GATTVNAQAQ EHIIAERNRR EKLNQKFIAL SAIIPGLKKA DKASVLGDAV RYVKELEARV
101: KALEDQNVKR TVESVVLVKK SQPSAADADA DDDGSSSDEN FDAQPSQKPF PEIEAKVSGK TVLMRIHCEN RKGVIVKILS EIESINLTII NTNVMPFLGS
201: SINVTVTAQA RPYFPEEFSM TVKDLVRKLG SALS
101: KALEDQNVKR TVESVVLVKK SQPSAADADA DDDGSSSDEN FDAQPSQKPF PEIEAKVSGK TVLMRIHCEN RKGVIVKILS EIESINLTII NTNVMPFLGS
201: SINVTVTAQA RPYFPEEFSM TVKDLVRKLG SALS
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.