Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 67.48 | 68.61 |
| GSMUA_Achr11P... | Banana | nucleus | 58.9 | 64.29 |
| GSMUA_Achr2P18140_001 | Banana | nucleus | 59.71 | 62.93 |
| GSMUA_Achr8P14720_001 | Banana | nucleus | 69.53 | 58.12 |
| GSMUA_Achr4P16980_001 | Banana | nucleus | 52.97 | 51.08 |
| GSMUA_Achr7P04720_001 | Banana | nucleus | 48.47 | 50.53 |
| GSMUA_Achr3P00370_001 | Banana | plastid | 41.72 | 46.36 |
| GSMUA_Achr9P20820_001 | Banana | nucleus | 26.79 | 35.6 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.79 | 33.85 |
| GSMUA_Achr10P... | Banana | nucleus | 26.79 | 32.83 |
| GSMUA_Achr1P18910_001 | Banana | nucleus | 24.54 | 30.46 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 26.99 | 29.27 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 26.99 | 26.56 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 24.74 | 25.47 |
| GSMUA_Achr10P... | Banana | nucleus | 23.72 | 25.27 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 23.31 | 24.62 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 23.93 | 23.83 |
| GSMUA_Achr1P08130_001 | Banana | mitochondrion | 25.77 | 22.58 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 25.97 | 22.09 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 20.86 | 21.07 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 7.16 | 17.41 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 9.2 | 16.92 |
| GSMUA_Achr3P17620_001 | Banana | nucleus | 17.79 | 15.43 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 16.77 | 15.02 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 8.79 | 14.58 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 6.95 | 14.53 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 9.61 | 14.51 |
| GSMUA_Achr11P... | Banana | nucleus | 13.91 | 14.44 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 9.61 | 14.37 |
| GSMUA_Achr11P... | Banana | nucleus | 15.75 | 13.95 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 9.41 | 13.86 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 9.41 | 13.77 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 8.59 | 13.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 8.79 | 13.35 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 15.75 | 13.1 |
| GSMUA_Achr11P... | Banana | nucleus | 15.75 | 12.98 |
| GSMUA_Achr6P21490_001 | Banana | nucleus | 17.18 | 12.9 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 7.36 | 10.84 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 6.13 | 8.8 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P18100_001 | EnsemblPlants:GSMUA_Achr5T18100_001 | EnsemblPlantsGene:GSMUA_Achr5G18100_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF43 | PFAM:PF14215 | PFscan:PS50888 | SEG:seg |
| SUPFAM:SSF47459 | UniParc:UPI0002951AE6 | UniProt:M0SZI9 | MapMan:15.5.32 | : | : |
Description
Putative Transcription factor bHLH28 [Source:GMGC_GENE;Acc:GSMUA_Achr5G18100_001]
Coordinates
chr5:+:19394314..19396679
Molecular Weight (calculated)
53744.5 Da
IEP (calculated)
7.581
GRAVY (calculated)
-0.533
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLWADDNAS MMEAFTDLQG FPWAATPTPS TPPLPTALDP GRALIGPPTP APPPTAYFNQ ETLQQRLQTL IDGAGENWTY GIFWQSSVDA ASGASFLGWG
101: DGYYKGCEED KRKQRAASAA SAAEQEHRKR WFFLVSMTQS FVNGDGLPGQ ALYAGAPSWV AGCDRLAAAP CERARQAQLF GIQTMVCYPV GSGVLELGST
201: DVILHSPEIM GKISDSIQKA LYGHQQQIHH PQHQSSGSKP QSQPFFSKEL NFSGFASNGS GMLSFSSAPT RPPSNSQLKS SCGGGVLDGA DSDQSDLEAS
301: VREVESIRVV EPEKRPRKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVLRSKLQ ASEADKEELQ SQMEIIKKER ESAPARPAPP PRYDVKMMKG
401: CHGVEIDVKL LGSEAMIRLQ SQKRNHPAAR LMAALQDLDL EVHYASVSVV KDLMIQQATV QMSSRVYTQE QLNAALYSRL VAETPPFSR
101: DGYYKGCEED KRKQRAASAA SAAEQEHRKR WFFLVSMTQS FVNGDGLPGQ ALYAGAPSWV AGCDRLAAAP CERARQAQLF GIQTMVCYPV GSGVLELGST
201: DVILHSPEIM GKISDSIQKA LYGHQQQIHH PQHQSSGSKP QSQPFFSKEL NFSGFASNGS GMLSFSSAPT RPPSNSQLKS SCGGGVLDGA DSDQSDLEAS
301: VREVESIRVV EPEKRPRKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVLRSKLQ ASEADKEELQ SQMEIIKKER ESAPARPAPP PRYDVKMMKG
401: CHGVEIDVKL LGSEAMIRLQ SQKRNHPAAR LMAALQDLDL EVHYASVSVV KDLMIQQATV QMSSRVYTQE QLNAALYSRL VAETPPFSR
001: MTDYRLQPTM NLWTTDDNAS MMEAFMSSSD ISTLWPPAST TTTTATTETT PTPAMEIPAQ AGFNQETLQQ RLQALIEGTH EGWTYAIFWQ PSYDFSGASV
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
Arabidopsis Description
MYC2ZBF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7C3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.