Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 57.88 | 67.09 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 21.98 | 63.16 |
| GSMUA_Achr11P... | Banana | nucleus | 67.03 | 61.72 |
| GSMUA_Achr11P... | Banana | nucleus | 59.52 | 58.88 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 54.03 | 50.17 |
| Os04t0557500-00 | Rice | mitochondrion, plasma membrane | 16.12 | 48.89 |
| VIT_02s0025g03450.t01 | Wine grape | nucleus | 50.92 | 44.27 |
| VIT_15s0046g02560.t01 | Wine grape | nucleus | 50.55 | 41.88 |
| CDY39747 | Canola | nucleus | 42.86 | 41.86 |
| TraesCSU01G116000.1 | Wheat | nucleus | 34.8 | 41.67 |
| TraesCS2D01G406900.1 | Wheat | nucleus | 42.12 | 40.56 |
| TraesCS2A01G409600.2 | Wheat | nucleus, plastid | 41.21 | 40.32 |
| CDY58950 | Canola | nucleus | 42.31 | 40.03 |
| HORVU2Hr1G096810.5 | Barley | nucleus | 41.03 | 39.93 |
| CDY25513 | Canola | nucleus | 41.94 | 39.69 |
| TraesCS2B01G428000.1 | Wheat | nucleus | 41.58 | 39.62 |
| TraesCS2A01G409400.1 | Wheat | nucleus | 40.66 | 39.08 |
| TraesCS4B01G397400.1 | Wheat | nucleus | 40.29 | 39.01 |
| CDY34367 | Canola | nucleus | 42.31 | 38.76 |
| Bra027653.1-P | Field mustard | nucleus | 42.31 | 38.76 |
| TraesCSU01G029400.1 | Wheat | nucleus | 40.48 | 38.64 |
| AT1G63650.1 | Thale cress | nucleus | 42.12 | 38.59 |
| Os01t0577300-00 | Rice | cytosol | 8.61 | 38.52 |
| Bra027796.1-P | Field mustard | nucleus | 42.49 | 38.28 |
| Os04t0557200-01 | Rice | cytosol, nucleus, peroxisome | 39.19 | 38.28 |
| TraesCS5A01G489500.1 | Wheat | nucleus | 39.74 | 38.07 |
| Solyc08g081140.2.1 | Tomato | nucleus | 43.59 | 38.02 |
| CDY08314 | Canola | nucleus | 42.12 | 38.02 |
| KRH41187 | Soybean | nucleus | 43.77 | 37.94 |
| TraesCS2D01G406800.1 | Wheat | plastid | 32.23 | 37.85 |
| Bra025508.1-P | Field mustard | nucleus | 43.22 | 37.52 |
| KRH59908 | Soybean | nucleus | 43.22 | 37.4 |
| TraesCS5A01G558500.1 | Wheat | nucleus | 39.56 | 36.92 |
| TraesCS4B01G397800.1 | Wheat | nucleus | 34.43 | 36.86 |
| Os04t0557800-00 | Rice | mitochondrion | 38.64 | 36.76 |
| TraesCS2D01G575600.3 | Wheat | nucleus, plastid | 39.19 | 36.33 |
| AT5G41315.2 | Thale cress | nucleus | 42.67 | 36.12 |
| OQU82120 | Sorghum | nucleus | 38.83 | 36.05 |
| OQU82117 | Sorghum | nucleus | 38.83 | 35.93 |
| Zm00001d000236_P001 | Maize | nucleus, plastid | 36.63 | 35.91 |
| OQU81560 | Sorghum | nucleus | 38.64 | 35.82 |
| TraesCS4D01G224600.1 | Wheat | nucleus | 36.08 | 35.37 |
| CDX91907 | Canola | nucleus | 34.98 | 35.11 |
| CDY70506 | Canola | nucleus | 34.25 | 35.02 |
| CDY51155 | Canola | mitochondrion, nucleus | 34.62 | 34.87 |
| Zm00001d026147_P002 | Maize | nucleus | 39.19 | 34.74 |
| CDY07214 | Canola | mitochondrion, nucleus | 34.25 | 34.5 |
| CDY72121 | Canola | nucleus | 19.05 | 33.77 |
| KRH65046 | Soybean | nucleus | 39.74 | 33.54 |
| KRH48144 | Soybean | nucleus | 39.93 | 33.54 |
| GSMUA_Achr3P17620_001 | Banana | nucleus | 34.43 | 33.33 |
| AT4G00480.2 | Thale cress | nucleus | 35.16 | 33.1 |
| TraesCS4B01G397300.1 | Wheat | nucleus | 23.26 | 31.2 |
| GSMUA_Achr6P21490_001 | Banana | nucleus | 36.26 | 30.41 |
| TraesCSU01G237100.1 | Wheat | nucleus | 20.15 | 29.97 |
| TraesCSU01G228400.1 | Wheat | nucleus | 20.15 | 29.97 |
| PGSC0003DMT400032140 | Potato | nucleus | 19.23 | 29.17 |
| Bra000970.1-P | Field mustard | nucleus | 34.25 | 28.59 |
| OQU82119 | Sorghum | nucleus | 28.21 | 28.21 |
| CDX77694 | Canola | nucleus | 12.82 | 27.67 |
| Bra037343.1-P | Field mustard | cytosol | 32.78 | 25.18 |
| Os01t0576100-00 | Rice | nucleus | 14.47 | 25.16 |
| GSMUA_Achr10P... | Banana | nucleus | 20.7 | 24.62 |
| Os11t0258700-00 | Rice | mitochondrion | 20.7 | 23.4 |
| GSMUA_Achr1P18910_001 | Banana | nucleus | 16.85 | 23.35 |
| GSMUA_Achr10P... | Banana | nucleus | 16.85 | 23.06 |
| GSMUA_Achr9P20820_001 | Banana | nucleus | 15.38 | 22.83 |
| GSMUA_Achr3P00370_001 | Banana | plastid | 18.32 | 22.73 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 18.32 | 22.17 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 19.05 | 21.89 |
| GSMUA_Achr11P... | Banana | nucleus | 17.95 | 21.88 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 19.6 | 21.79 |
| GSMUA_Achr7P04720_001 | Banana | nucleus | 18.68 | 21.75 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 19.05 | 21.49 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 18.13 | 21.38 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 19.41 | 21.33 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 12.64 | 21.3 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 10.26 | 21.05 |
| GSMUA_Achr4P16980_001 | Banana | nucleus | 19.23 | 20.71 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 12.27 | 20.06 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 11.9 | 19.88 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 20.88 | 19.83 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 10.62 | 19.66 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 7.14 | 19.4 |
| GSMUA_AchrUn_... | Banana | cytosol | 18.32 | 19.34 |
| GSMUA_Achr2P18140_001 | Banana | nucleus | 16.3 | 19.18 |
| GSMUA_Achr11P... | Banana | nucleus | 16.85 | 19.13 |
| GSMUA_Achr8P14720_001 | Banana | nucleus | 19.23 | 17.95 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 10.81 | 17.77 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 9.89 | 17.25 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 7.33 | 17.09 |
| GSMUA_Achr5P18100_001 | Banana | nucleus | 15.02 | 16.77 |
| GSMUA_AchrUn_... | Banana | nucleus | 9.71 | 16.46 |
| GSMUA_Achr1P08130_001 | Banana | mitochondrion | 16.3 | 15.95 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 8.24 | 13.55 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 8.06 | 12.9 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | EnsemblPlantsGene:GSMUA_Achr8G11430_001 | EnsemblPlants:GSMUA_Achr8P11430_001 | EnsemblPlants:GSMUA_Achr8T11430_001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:M0TPJ6 | InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF38 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00029597F3 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
Putative Transcription factor GLABRA 3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G11430_001]
Coordinates
chr8:-:8229914..8234005
Molecular Weight (calculated)
61735.0 Da
IEP (calculated)
7.010
GRAVY (calculated)
-0.324
Length
546 amino acids
Sequence
(BLAST)
(BLAST)
001: MEADLEIHEE LPEKHHLRKQ IAATVRKIQW SYAIFWSIST RQPGVLAWSD GYYNGDIKTR KMTQPIELKA DQMGLQRSEQ LRELYETLSA GDSIQQTRRP
101: SASLSPEDLT DAEWYYLVCM TFKFTLGQGL PGKALANNQH IWLNNAQFAD SKIFSRSLLA KSASIQTVVC IPFMGGVLEL GTTELILEDV DLVKQITSFF
201: WELPNPICYE QSISSPQLAE RGEGIICPDI DNGIDNSIPL GDHNLITDRQ TPLESDPTHF PFPFHSYVSI EHTESVKLED LLGADGLNGT SRTHSMQLHS
301: SLDLDGDDSH YAETVATILR TSKQVNPVLC FLKVSFRSSF VVWRRGFNTP KSFMSTPQKL LKKILMDRAW WRGNHVLSER RRREKLNEKF LALRSLVPTG
401: GKIDKASILD DTTQYLKHLE RRVQELESGT AITNEWKPLG NKRKACDIDE GVAEHHFVLS KHGPVHVTVT VKEKEVLVEL RCPWRECLLL EVVESMSNLH
501: LDPISVQSSS VDGMLALSVK SKLRSSNVAS PGMIKRSLQR VISKCL
101: SASLSPEDLT DAEWYYLVCM TFKFTLGQGL PGKALANNQH IWLNNAQFAD SKIFSRSLLA KSASIQTVVC IPFMGGVLEL GTTELILEDV DLVKQITSFF
201: WELPNPICYE QSISSPQLAE RGEGIICPDI DNGIDNSIPL GDHNLITDRQ TPLESDPTHF PFPFHSYVSI EHTESVKLED LLGADGLNGT SRTHSMQLHS
301: SLDLDGDDSH YAETVATILR TSKQVNPVLC FLKVSFRSSF VVWRRGFNTP KSFMSTPQKL LKKILMDRAW WRGNHVLSER RRREKLNEKF LALRSLVPTG
401: GKIDKASILD DTTQYLKHLE RRVQELESGT AITNEWKPLG NKRKACDIDE GVAEHHFVLS KHGPVHVTVT VKEKEVLVEL RCPWRECLLL EVVESMSNLH
501: LDPISVQSSS VDGMLALSVK SKLRSSNVAS PGMIKRSLQR VISKCL
001: MDEETMATGQ NRTTVPENLK KHLAVSVRNI QWSYGIFWSV SASQSGVLEW GDGYYNGDIK TRKTIQASEI KADQLGLRRS EQLSELYESL SVAESSSSGV
101: AAGSQVTRRA SAAALSPEDL ADTEWYYLVC MSFVFNIGEG MPGRTFANGE PIWLCNAHTA DSKVFSRSLL AKSAAVKTVV CFPFLGGVVE IGTTEHITED
201: MNVIQCVKTS FLEAPDPYAT ILPARSDYHI DNVLDPQQIL GDEIYAPMFS TEPFPTASPS RTTNGFDQEH EQVADDHDSF MTERITGGAS QVQSWQLMDD
301: ELSNCVHQSL NSSDCVSQTF VEGAAGRVAY GARKSRVQRL GQIQEQQRNV KTLSFDPRND DVHYQSVIST IFKTNHQLIL GPQFRNCDKQ SSFTRWKKSS
401: SSSSGTATVT APSQGMLKKI IFDVPRVHQK EKLMLDSPEA RDETGNHAVL EKKRREKLNE RFMTLRKIIP SINKIDKVSI LDDTIEYLQE LERRVQELES
501: CRESTDTETR GTMTMKRKKP CDAGERTSAN CANNETGNGK KVSVNNVGEA EPADTGFTGL TDNLRIGSFG NEVVIELRCA WREGVLLEIM DVISDLHLDS
601: HSVQSSTGDG LLCLTVNCKH KGSKIATPGM IKEALQRVAW IC
101: AAGSQVTRRA SAAALSPEDL ADTEWYYLVC MSFVFNIGEG MPGRTFANGE PIWLCNAHTA DSKVFSRSLL AKSAAVKTVV CFPFLGGVVE IGTTEHITED
201: MNVIQCVKTS FLEAPDPYAT ILPARSDYHI DNVLDPQQIL GDEIYAPMFS TEPFPTASPS RTTNGFDQEH EQVADDHDSF MTERITGGAS QVQSWQLMDD
301: ELSNCVHQSL NSSDCVSQTF VEGAAGRVAY GARKSRVQRL GQIQEQQRNV KTLSFDPRND DVHYQSVIST IFKTNHQLIL GPQFRNCDKQ SSFTRWKKSS
401: SSSSGTATVT APSQGMLKKI IFDVPRVHQK EKLMLDSPEA RDETGNHAVL EKKRREKLNE RFMTLRKIIP SINKIDKVSI LDDTIEYLQE LERRVQELES
501: CRESTDTETR GTMTMKRKKP CDAGERTSAN CANNETGNGK KVSVNNVGEA EPADTGFTGL TDNLRIGSFG NEVVIELRCA WREGVLLEIM DVISDLHLDS
601: HSVQSSTGDG LLCLTVNCKH KGSKIATPGM IKEALQRVAW IC
Arabidopsis Description
GL3Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1R7T3F7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.