Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU81560 | Sorghum | nucleus | 81.53 | 81.66 |
| OQU82120 | Sorghum | nucleus | 79.32 | 79.59 |
| Zm00001d026147_P002 | Maize | nucleus | 76.78 | 73.54 |
| OQU82119 | Sorghum | nucleus | 58.81 | 63.55 |
| TraesCS2D01G406900.1 | Wheat | nucleus | 58.14 | 60.49 |
| TraesCS2A01G409600.2 | Wheat | nucleus, plastid | 55.25 | 58.42 |
| HORVU2Hr1G096810.5 | Barley | nucleus | 55.42 | 58.29 |
| TraesCS2B01G428000.1 | Wheat | nucleus | 56.44 | 58.12 |
| TraesCS2A01G409400.1 | Wheat | nucleus | 54.92 | 57.04 |
| Os04t0557200-01 | Rice | cytosol, nucleus, peroxisome | 53.22 | 56.17 |
| TraesCS2D01G406800.1 | Wheat | plastid | 44.07 | 55.91 |
| Os04t0557800-00 | Rice | mitochondrion | 53.73 | 55.23 |
| TraesCSU01G116000.1 | Wheat | nucleus | 42.03 | 54.39 |
| TraesCS4B01G397400.1 | Wheat | nucleus | 51.19 | 53.55 |
| TraesCS5A01G489500.1 | Wheat | nucleus | 51.69 | 53.51 |
| TraesCSU01G029400.1 | Wheat | nucleus | 51.53 | 53.15 |
| TraesCSU01G228400.1 | Wheat | nucleus | 33.05 | 53.13 |
| TraesCSU01G237100.1 | Wheat | nucleus | 33.05 | 53.13 |
| TraesCS4D01G224600.1 | Wheat | nucleus | 50.0 | 52.96 |
| TraesCS5A01G558500.1 | Wheat | nucleus | 51.53 | 51.97 |
| Os01t0577300-00 | Rice | cytosol | 10.68 | 51.64 |
| TraesCS2D01G575600.3 | Wheat | nucleus, plastid | 50.68 | 50.76 |
| TraesCS4B01G397800.1 | Wheat | nucleus | 40.34 | 46.67 |
| TraesCS4B01G397300.1 | Wheat | nucleus | 31.53 | 45.7 |
| GSMUA_Achr11P... | Banana | nucleus | 35.42 | 44.37 |
| Os01t0576100-00 | Rice | nucleus | 22.71 | 42.68 |
| Os11t0258700-00 | Rice | mitochondrion | 32.2 | 39.34 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 35.93 | 38.83 |
| GSMUA_Achr11P... | Banana | nucleus | 34.58 | 36.96 |
| GSMUA_Achr11P... | Banana | nucleus | 35.08 | 34.91 |
| VIT_02s0025g03450.t01 | Wine grape | nucleus | 36.27 | 34.08 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 33.9 | 34.01 |
| AT1G63650.1 | Thale cress | nucleus | 32.03 | 31.71 |
| Bra027796.1-P | Field mustard | nucleus | 32.37 | 31.52 |
| Solyc08g081140.2.1 | Tomato | nucleus | 33.39 | 31.47 |
| Bra027653.1-P | Field mustard | nucleus | 31.36 | 31.04 |
| VIT_15s0046g02560.t01 | Wine grape | nucleus | 34.41 | 30.8 |
| KRH41187 | Soybean | nucleus | 32.88 | 30.79 |
| Bra025508.1-P | Field mustard | nucleus | 32.54 | 30.52 |
| KRH59908 | Soybean | nucleus | 32.37 | 30.27 |
| AT5G41315.2 | Thale cress | nucleus | 31.53 | 28.84 |
| KRH48144 | Soybean | nucleus | 31.53 | 28.62 |
| KRH65046 | Soybean | nucleus | 31.36 | 28.59 |
| AT4G00480.2 | Thale cress | nucleus | 26.27 | 26.72 |
| CDX77694 | Canola | nucleus | 10.34 | 24.11 |
| OQU88697 | Sorghum | nucleus | 27.63 | 24.08 |
| PGSC0003DMT400032140 | Potato | nucleus | 14.41 | 23.61 |
| Bra000970.1-P | Field mustard | nucleus | 25.76 | 23.24 |
| EES01345 | Sorghum | nucleus | 18.47 | 22.52 |
| KXG25462 | Sorghum | nucleus | 9.83 | 20.86 |
| Bra037343.1-P | Field mustard | cytosol | 24.75 | 20.53 |
| OQU80776 | Sorghum | nucleus | 8.98 | 20.15 |
| OQU75588 | Sorghum | nucleus | 8.98 | 20.15 |
| OQU86344 | Sorghum | nucleus | 8.64 | 19.92 |
| OQU80778 | Sorghum | nucleus | 8.81 | 19.26 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 8.64 | 18.48 |
| KXG39824 | Sorghum | nucleus | 10.0 | 18.1 |
| EER99993 | Sorghum | nucleus | 18.98 | 18.01 |
| EER99201 | Sorghum | nucleus | 8.98 | 17.91 |
| OQU80777 | Sorghum | nucleus | 8.47 | 17.86 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 8.31 | 17.56 |
| EES19274 | Sorghum | nucleus | 17.46 | 17.55 |
| EES10849 | Sorghum | nucleus | 10.17 | 17.39 |
| EER93685 | Sorghum | mitochondrion | 10.85 | 17.2 |
| KXG37671 | Sorghum | nucleus | 10.17 | 16.85 |
| KXG39194 | Sorghum | nucleus | 19.83 | 16.55 |
| OQU92034 | Sorghum | nucleus | 8.81 | 16.4 |
| KXG37866 | Sorghum | nucleus | 9.66 | 15.36 |
| OQU92032 | Sorghum | nucleus | 8.64 | 15.0 |
| EER93684 | Sorghum | nucleus | 9.15 | 14.03 |
| KXG24110 | Sorghum | nucleus | 8.98 | 13.32 |
| OQU77369 | Sorghum | nucleus | 9.32 | 13.1 |
| OQU75589 | Sorghum | nucleus | 8.47 | 12.99 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1Z5REJ0 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N |
| EnsemblPlants:OQU82117 | ProteinID:OQU82117 | ProteinID:OQU82117.1 | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF94 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3006G175200 | SUPFAM:SSF47459 | UniParc:UPI000B8BB0EC |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:53044461..53049377
Molecular Weight (calculated)
64273.9 Da
IEP (calculated)
4.853
GRAVY (calculated)
-0.300
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSASQVQE ELQQAAERQL MRNQLAAAAR SINWTYALFW SISSTRPGVL TWTDGFYNGE VKTRKISNSV ELTADQLVMQ RSEQLRELYE ALLSGECDRR
101: AARPVGSLSP EDLGDTEWYY VVCMTYAFQP GQGLPGRSFG GNEHVWLRNA HLADSKAFPR AVLAKSASIQ SIICIPLMGG VLELGTTDTV PEDPDLISRA
201: TAAFWEPQCP TYSEEPTSNP SANEAGEAAD IVVFEDQLGH SAMKTTTAAG NEPVSLFNAS LDHITDEIDD FYSLLEEMVV RPLPLEDSLI MVDGSNNFEV
301: PSSPEPPSPG ATTNNNGADT SSSPADGSRA TSFMAWTRSS QSCSDEAVAA VPVIEEPQKL LKKVVAGGEA WANCGGGGTA GTAQESGIKN HVMSERKRRE
401: KINEMFLILK SLVPSIHKAM KIHVDKASIL TETIAYLKEL QRRVQELESS RELTTPSETT TRTTRPRGIS NESARKKLCA GSKRESPALE VDGDVVNKEH
501: PWVLPKDGTS NVTVTVANTD VLLEVQCRWE ELLMTRVFDA IKSLHLDVLS VQASTPDGFM GLKIRAQFAG SGAVVPWMIS EALHKAIGKR
101: AARPVGSLSP EDLGDTEWYY VVCMTYAFQP GQGLPGRSFG GNEHVWLRNA HLADSKAFPR AVLAKSASIQ SIICIPLMGG VLELGTTDTV PEDPDLISRA
201: TAAFWEPQCP TYSEEPTSNP SANEAGEAAD IVVFEDQLGH SAMKTTTAAG NEPVSLFNAS LDHITDEIDD FYSLLEEMVV RPLPLEDSLI MVDGSNNFEV
301: PSSPEPPSPG ATTNNNGADT SSSPADGSRA TSFMAWTRSS QSCSDEAVAA VPVIEEPQKL LKKVVAGGEA WANCGGGGTA GTAQESGIKN HVMSERKRRE
401: KINEMFLILK SLVPSIHKAM KIHVDKASIL TETIAYLKEL QRRVQELESS RELTTPSETT TRTTRPRGIS NESARKKLCA GSKRESPALE VDGDVVNKEH
501: PWVLPKDGTS NVTVTVANTD VLLEVQCRWE ELLMTRVFDA IKSLHLDVLS VQASTPDGFM GLKIRAQFAG SGAVVPWMIS EALHKAIGKR
001: MATGENRTVP DNLKKQLAVS VRNIQWSYGI FWSVSASQPG VLEWGDGYYN GDIKTRKTIQ AAEVKIDQLG LERSEQLREL YESLSLAESS ASGSSQVTRR
101: ASAAALSPED LTDTEWYYLV CMSFVFNIGE GIPGGALSNG EPIWLCNAET ADSKVFTRSL LAKSASLQTV VCFPFLGGVL EIGTTEHIKE DMNVIQSVKT
201: LFLEAPPYTT ISTRSDYQEI FDPLSDDKYT PVFITEAFPT TSTSGFEQEP EDHDSFINDG GASQVQSWQF VGEEISNCIH QSLNSSDCVS QTFVGTTGRL
301: ACDPRKSRIQ RLGQIQEQSN HVNMDDDVHY QGVISTIFKT THQLILGPQF QNFDKRSSFT RWKRSSSVKT LGEKSQKMIK KILFEVPLMN KKEELLPDTP
401: EETGNHALSE KKRREKLNER FMTLRSIIPS ISKIDKVSIL DDTIEYLQDL QKRVQELESC RESADTETRI TMMKRKKPDD EEERASANCM NSKRKGSDVN
501: VGEDEPADIG YAGLTDNLRI SSLGNEVVIE LRCAWREGIL LEIMDVISDL NLDSHSVQSS TGDGLLCLTV NCKHKGTKIA TTGMIQEALQ RVAWIC
101: ASAAALSPED LTDTEWYYLV CMSFVFNIGE GIPGGALSNG EPIWLCNAET ADSKVFTRSL LAKSASLQTV VCFPFLGGVL EIGTTEHIKE DMNVIQSVKT
201: LFLEAPPYTT ISTRSDYQEI FDPLSDDKYT PVFITEAFPT TSTSGFEQEP EDHDSFINDG GASQVQSWQF VGEEISNCIH QSLNSSDCVS QTFVGTTGRL
301: ACDPRKSRIQ RLGQIQEQSN HVNMDDDVHY QGVISTIFKT THQLILGPQF QNFDKRSSFT RWKRSSSVKT LGEKSQKMIK KILFEVPLMN KKEELLPDTP
401: EETGNHALSE KKRREKLNER FMTLRSIIPS ISKIDKVSIL DDTIEYLQDL QKRVQELESC RESADTETRI TMMKRKKPDD EEERASANCM NSKRKGSDVN
501: VGEDEPADIG YAGLTDNLRI SSLGNEVVIE LRCAWREGIL LEIMDVISDL NLDSHSVQSS TGDGLLCLTV NCKHKGTKIA TTGMIQEALQ RVAWIC
Arabidopsis Description
BHLH2EGL3 [Source:UniProtKB/TrEMBL;Acc:A0A178W1W8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.