Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU75589 | Sorghum | nucleus | 87.62 | 95.58 |
| Zm00001d024781_P001 | Maize | nucleus | 66.43 | 79.04 |
| TraesCS4D01G306400.1 | Wheat | nucleus | 20.71 | 52.73 |
| EES10849 | Sorghum | nucleus | 39.29 | 47.83 |
| KXG37866 | Sorghum | nucleus | 41.43 | 46.9 |
| TraesCS4D01G019200.1 | Wheat | nucleus | 38.81 | 45.28 |
| HORVU4Hr1G003210.1 | Barley | nucleus | 39.05 | 44.93 |
| EER93685 | Sorghum | mitochondrion | 39.76 | 44.89 |
| TraesCS4B01G021500.1 | Wheat | nucleus | 38.1 | 44.82 |
| TraesCS4B01G308200.1 | Wheat | nucleus | 38.1 | 44.44 |
| TraesCS4B01G021100.1 | Wheat | nucleus | 38.33 | 44.35 |
| TraesCS4B01G020900.1 | Wheat | nucleus | 39.05 | 44.32 |
| TraesCS4D01G018700.1 | Wheat | nucleus | 38.1 | 44.32 |
| TraesCS4A01G292800.1 | Wheat | nucleus | 38.57 | 44.02 |
| TraesCS4A01G408700.1 | Wheat | nucleus | 28.1 | 43.7 |
| HORVU3Hr1G002620.1 | Barley | plastid | 23.81 | 43.48 |
| TraesCS4B01G308300.1 | Wheat | nucleus | 37.62 | 43.41 |
| TraesCS4D01G306300.1 | Wheat | nucleus | 35.0 | 43.11 |
| TraesCS4B01G308100.1 | Wheat | nucleus | 35.48 | 42.94 |
| TraesCS4B01G021200.1 | Wheat | nucleus | 37.38 | 42.55 |
| TraesCS3A01G019000.1 | Wheat | nucleus | 31.9 | 42.01 |
| TraesCS3B01G029800.1 | Wheat | nucleus | 32.62 | 41.77 |
| TraesCS3D01G014900.1 | Wheat | nucleus | 33.33 | 41.67 |
| HORVU4Hr1G078880.2 | Barley | nucleus | 36.19 | 41.64 |
| TraesCS4A01G408800.1 | Wheat | nucleus | 37.38 | 40.89 |
| TraesCS3A01G019100.1 | Wheat | nucleus | 30.95 | 40.88 |
| EER93684 | Sorghum | nucleus | 35.71 | 38.96 |
| HORVU4Hr1G078910.2 | Barley | nucleus | 33.57 | 38.01 |
| KXG24110 | Sorghum | nucleus | 32.62 | 34.42 |
| KXG37671 | Sorghum | nucleus | 26.67 | 31.46 |
| OQU92034 | Sorghum | nucleus | 15.95 | 21.14 |
| KXG39824 | Sorghum | nucleus | 16.19 | 20.86 |
| KXG25462 | Sorghum | nucleus | 12.62 | 19.06 |
| OQU80777 | Sorghum | nucleus | 12.62 | 18.93 |
| OQU92032 | Sorghum | nucleus | 15.24 | 18.82 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 11.67 | 17.75 |
| OQU86344 | Sorghum | nucleus | 10.71 | 17.58 |
| EER99201 | Sorghum | nucleus | 12.38 | 17.57 |
| OQU80776 | Sorghum | nucleus | 10.95 | 17.49 |
| OQU75588 | Sorghum | nucleus | 10.95 | 17.49 |
| OQU80778 | Sorghum | nucleus | 11.19 | 17.41 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 11.19 | 16.85 |
| EES01345 | Sorghum | nucleus | 13.1 | 11.36 |
| EES19274 | Sorghum | nucleus | 13.57 | 9.71 |
| OQU82120 | Sorghum | nucleus | 13.1 | 9.35 |
| KXG39194 | Sorghum | nucleus | 15.71 | 9.34 |
| OQU82117 | Sorghum | nucleus | 13.1 | 9.32 |
| OQU81560 | Sorghum | nucleus | 12.62 | 9.0 |
| OQU82119 | Sorghum | nucleus | 11.19 | 8.61 |
| EER99993 | Sorghum | nucleus | 12.62 | 8.52 |
| OQU88697 | Sorghum | nucleus | 12.38 | 7.68 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | UniProt:A0A1Z5R1G1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| EnsemblPlants:OQU77369 | ProteinID:OQU77369 | ProteinID:OQU77369.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 |
| PANTHER:PTHR23042:SF74 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3009G036333 | SUPFAM:SSF47459 | UniParc:UPI000B423AED | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:3328870..3332826
Molecular Weight (calculated)
43579.9 Da
IEP (calculated)
4.795
GRAVY (calculated)
-0.330
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEAASNME DSSLFMQWAM DTLLQEEEPA VDDVHWAMDT LLQEEEEEHA AVDGGDAVVF PSLQALRDAS HAAEMVRELM AVAAAAETHD AAAANSSPSG
101: GSGDGGGEVT DGGSSGATGT DPAAPATTAA TDYYGGSWPP QSPTSSSFAR APPPAPPSSN SNTILPTVSW NFVTGSAQPG SEGVLEEAAV PARSLPPPEL
201: AQRRRSPPPP RRAAHHPVRS MGAPSSASCT PDHIVAERKR REKINKRLIE LSTVIPGLKK MDKATILSDA AKYVKELQQR LKALEDAAAA DAGSIRRKAP
301: PAADENGGSG SPTSASSSSG APALPEIEAR LSERSVMVRI HSCGGKGVAA AALAVVEGLG LTVVHANVMP FSACTISITI TAEMEGRRLT LTTEQIVGKL
401: KSALSHQRSI SCKDAEETEN
101: GSGDGGGEVT DGGSSGATGT DPAAPATTAA TDYYGGSWPP QSPTSSSFAR APPPAPPSSN SNTILPTVSW NFVTGSAQPG SEGVLEEAAV PARSLPPPEL
201: AQRRRSPPPP RRAAHHPVRS MGAPSSASCT PDHIVAERKR REKINKRLIE LSTVIPGLKK MDKATILSDA AKYVKELQQR LKALEDAAAA DAGSIRRKAP
301: PAADENGGSG SPTSASSSSG APALPEIEAR LSERSVMVRI HSCGGKGVAA AALAVVEGLG LTVVHANVMP FSACTISITI TAEMEGRRLT LTTEQIVGKL
401: KSALSHQRSI SCKDAEETEN
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.