Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G020900.1 | Wheat | nucleus | 88.98 | 87.3 |
| HORVU4Hr1G003210.1 | Barley | nucleus | 86.78 | 86.3 |
| TraesCS4B01G021500.1 | Wheat | nucleus | 83.75 | 85.15 |
| TraesCS4B01G021200.1 | Wheat | nucleus | 85.67 | 84.28 |
| TraesCS4D01G018700.1 | Wheat | nucleus | 83.75 | 84.21 |
| Zm00001d038966_P001 | Maize | plastid | 31.13 | 55.39 |
| Zm00001d026009_P001 | Maize | plastid | 30.58 | 54.41 |
| KXG37866 | Sorghum | nucleus | 53.44 | 52.29 |
| EES10849 | Sorghum | nucleus | 49.04 | 51.59 |
| TraesCS3B01G029800.1 | Wheat | nucleus | 44.35 | 49.09 |
| TraesCS4B01G308200.1 | Wheat | nucleus | 48.21 | 48.61 |
| Zm00001d003604_P001 | Maize | nucleus | 44.35 | 47.92 |
| Zm00001d033413_P001 | Maize | nucleus | 41.87 | 47.8 |
| TraesCS4B01G308100.1 | Wheat | nucleus | 45.45 | 47.55 |
| TraesCS5B01G518400.1 | Wheat | nucleus | 42.42 | 47.38 |
| EER93685 | Sorghum | mitochondrion | 48.48 | 47.31 |
| TraesCS4B01G308300.1 | Wheat | nucleus | 47.11 | 46.98 |
| Zm00001d033412_P001 | Maize | nucleus | 46.56 | 45.8 |
| Zm00001d025462_P001 | Maize | nucleus | 41.6 | 45.76 |
| TraesCS4B01G020700.1 | Wheat | nucleus | 44.9 | 44.66 |
| TraesCS5B01G518500.1 | Wheat | nucleus | 39.67 | 44.31 |
| TraesCS5B01G518800.1 | Wheat | nucleus | 36.36 | 41.9 |
| Zm00001d024781_P001 | Maize | nucleus | 40.5 | 41.64 |
| OQU77369 | Sorghum | nucleus | 44.35 | 38.33 |
| OQU75589 | Sorghum | nucleus | 40.5 | 38.18 |
| TraesCS5B01G013000.2 | Wheat | nucleus | 39.67 | 38.1 |
| TraesCS7B01G483600.1 | Wheat | nucleus | 32.51 | 36.76 |
| TraesCS4B01G345800.1 | Wheat | nucleus | 24.52 | 28.62 |
| TraesCS4B01G234700.1 | Wheat | nucleus | 23.42 | 28.24 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 26.72 | 25.94 |
| TraesCS4B01G391500.1 | Wheat | nucleus | 22.86 | 25.86 |
| TraesCS4B01G335200.1 | Wheat | nucleus | 14.33 | 21.14 |
| TraesCS5B01G307000.1 | Wheat | nucleus | 15.43 | 20.07 |
| TraesCS5B01G306800.1 | Wheat | nucleus | 14.88 | 19.29 |
| TraesCS2B01G469300.1 | Wheat | nucleus | 12.95 | 18.36 |
| TraesCS5B01G307100.1 | Wheat | nucleus | 13.77 | 18.32 |
| TraesCS2B01G469200.1 | Wheat | nucleus | 12.4 | 18.29 |
| TraesCS1B01G387900.1 | Wheat | nucleus | 11.85 | 17.99 |
| TraesCS5B01G306600.1 | Wheat | nucleus | 13.5 | 17.95 |
| TraesCS3B01G288700.1 | Wheat | nucleus | 14.6 | 11.96 |
| TraesCS4B01G397300.1 | Wheat | nucleus | 12.12 | 10.81 |
| TraesCS3B01G284800.1 | Wheat | nucleus | 14.05 | 10.74 |
| TraesCS4B01G397400.1 | Wheat | nucleus | 15.98 | 10.28 |
| TraesCS4B01G276900.1 | Wheat | nucleus | 16.8 | 10.2 |
| TraesCS1B01G208000.1 | Wheat | nucleus | 18.18 | 9.52 |
| TraesCS2B01G428000.1 | Wheat | nucleus | 14.88 | 9.42 |
| TraesCS1B01G112900.1 | Wheat | nucleus | 15.98 | 9.19 |
| TraesCS3B01G185400.1 | Wheat | nucleus | 15.15 | 8.8 |
| TraesCS1B01G113100.4 | Wheat | nucleus | 16.25 | 8.58 |
| TraesCS4B01G397800.1 | Wheat | nucleus | 11.29 | 8.04 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G021100.1 | EnsemblPlantsGene:TraesCS4B01G021100 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR23042 | PANTHER:PTHR23042:SF74 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | TIGR:cd00083 | MapMan:15.5.32 | MapMan:25.4.1.7 | : | : |
Description
No Description!
Coordinates
chr4B:-:15146117..15150854
Molecular Weight (calculated)
38445.6 Da
IEP (calculated)
5.248
GRAVY (calculated)
-0.158
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDSALFMEW AMDTLEQEHP DPVVAVNGEA AFPSLQALCE QRLVFEELIT GPNPASSGSS GETTDGSGCF GGNFSCPAAM EHDIWPPSPP TLARCAPRLS
101: GNGGVGGINL PVTSWNFCAA SALPASDSTL DSGNAGPVVP EMVYGSQPTR RAAARSPTGT GPVSSGPPYA QDHNMAERKR REKINQRFIE LSTVIPGLKK
201: MHKATILSDA TRHVKELQAK IKALEAATGR SSRSIETVVL VKKKPRHAAA AAVSDQNGSP LSASSCTGNP LPEIEVRFSE NGVMLRILCD DVQGVVVRVL
301: AEVEEGLHLT VTHANVMPFT ACTVIITITA KVDEGFTVTA EEIVGRLNSM LELHSSCTST EEK
101: GNGGVGGINL PVTSWNFCAA SALPASDSTL DSGNAGPVVP EMVYGSQPTR RAAARSPTGT GPVSSGPPYA QDHNMAERKR REKINQRFIE LSTVIPGLKK
201: MHKATILSDA TRHVKELQAK IKALEAATGR SSRSIETVVL VKKKPRHAAA AAVSDQNGSP LSASSCTGNP LPEIEVRFSE NGVMLRILCD DVQGVVVRVL
301: AEVEEGLHLT VTHANVMPFT ACTVIITITA KVDEGFTVTA EEIVGRLNSM LELHSSCTST EEK
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.