Factsheet for TraesCS3B01G284800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G253700.1	Wheat	nucleus	93.47	95.48
TraesCS3A01G252900.1	Wheat	nucleus	91.37	94.55
TraesCS3B01G288700.1	Wheat	nucleus	86.74	93.0
HORVU3Hr1G066390.1	Barley	nucleus	89.05	90.97
Os01t0705700-01	Rice	nucleus	72.0	74.35
Zm00001d043706_P001	Maize	nucleus	70.53	71.73
EES01345	Sorghum	nucleus	72.84	71.49
VIT_07s0141g01060.t01	Wine grape	nucleus	34.53	33.4
TraesCS4B01G276900.1	Wheat	nucleus	41.89	33.28
Bra038458.1-P	Field mustard	nucleus	31.58	33.26
CDY32242	Canola	nucleus	31.58	33.26
CDY34468	Canola	nucleus	31.37	33.04
AT4G16430.1	Thale cress	nucleus	32.21	32.76
PGSC0003DMT400051672	Potato	nucleus	32.63	32.49
Solyc06g083980.1.1	Tomato	nucleus	32.21	32.08
Bra012720.1-P	Field mustard	nucleus	30.74	32.02
CDX90525	Canola	nucleus	30.74	32.02
TraesCS3B01G185400.1	Wheat	nucleus	42.11	32.0
KRH19522	Soybean	nucleus	33.68	31.62
KRH32144	Soybean	nucleus	33.47	31.55
CDY09695	Canola	nucleus	29.05	28.34
TraesCS5B01G307000.1	Wheat	nucleus	16.0	27.24
TraesCS5B01G306800.1	Wheat	nucleus	15.58	26.43
TraesCS5B01G307100.1	Wheat	nucleus	14.74	25.64
TraesCS5B01G306600.1	Wheat	nucleus	14.53	25.27
TraesCS2B01G469200.1	Wheat	nucleus	12.84	24.8
TraesCS2B01G469300.1	Wheat	nucleus	13.26	24.61
TraesCS1B01G387900.1	Wheat	nucleus	11.79	23.43
TraesCS1B01G208000.1	Wheat	nucleus	32.63	22.37
TraesCS2B01G428000.1	Wheat	nucleus	22.74	18.85
TraesCS4B01G397400.1	Wheat	nucleus	21.68	18.26
TraesCS4B01G397800.1	Wheat	nucleus	18.95	17.65
TraesCS4B01G335200.1	Wheat	nucleus	9.05	17.48
TraesCS4B01G345800.1	Wheat	nucleus	11.16	17.04
TraesCS4B01G234700.1	Wheat	nucleus	10.74	16.94
TraesCS4B01G020700.1	Wheat	nucleus	12.21	15.89
TraesCS4B01G391500.1	Wheat	nucleus	10.53	15.58
TraesCS5B01G518400.1	Wheat	nucleus	10.53	15.38
TraesCS5B01G518500.1	Wheat	nucleus	10.53	15.38
TraesCS1B01G112900.1	Wheat	nucleus	20.42	15.37
TraesCS7B01G483600.1	Wheat	nucleus	10.32	15.26
TraesCS4B01G397300.1	Wheat	nucleus	12.84	14.99
TraesCS4B01G308100.1	Wheat	nucleus	10.95	14.99
TraesCS3B01G029800.1	Wheat	nucleus	10.32	14.94
TraesCS5B01G518800.1	Wheat	nucleus	9.89	14.92
TraesCS4B01G021500.1	Wheat	nucleus	11.16	14.85
TraesCS4B01G308200.1	Wheat	nucleus	10.95	14.44
TraesCS1B01G113100.4	Wheat	nucleus	20.84	14.39
TraesCS4B01G020900.1	Wheat	nucleus	11.16	14.32
TraesCS4B01G308300.1	Wheat	nucleus	10.95	14.29
TraesCS4B01G021100.1	Wheat	nucleus	10.74	14.05
TraesCS4B01G056600.2	Wheat	nucleus	10.74	13.64
TraesCS4B01G021200.1	Wheat	nucleus	10.32	13.28
TraesCS5B01G013000.2	Wheat	nucleus	10.32	12.96

Protein Annotations

EnsemblPlants:TraesCS3B01G284800.1	EnsemblPlantsGene:TraesCS3B01G284800	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:MYC/MYB_N	InterPro:bHLH_dom
PANTHER:PTHR11514	PANTHER:PTHR11514:SF59	PFAM:PF00010	PFAM:PF14215	PFscan:PS50888	SEG:seg
SMART:SM00353	SUPFAM:SSF47459	TIGR:cd00083	MapMan:15.5.32	:	:

Description

No Description!

Coordinates

chr3B:-:456323130..456324920

Molecular Weight (calculated)

50762.3 Da

IEP (calculated)

8.045

GRAVY (calculated)

-0.312

Length

475 amino acids

Sequence
(BLAST)

001: MSWSDTDAAL FAAVLGHDAA RHLATTPPHL DGPASSSPEL QARLCDLVER GGAWTYGIYW QESRAGAGGR PVLGWGDGHC RDGPAEEARV TDRSLARKRA
101: LLRLHALYGG GDDDGADYAL RLDRVTGVEM YFLASMYFSF HEDAGGPGRA LTSGHHAWAT VDPHLPGSAA APGWYVRASL AQSAGLRTIV FLPCKGGVLE
201: LGSAVAMCEN PEVLRAIQSA FHVEAVAPDD RMRIFGKDVS RSPPLPPVQT TGSDASWALR LGGQAMVATP AKQEVAAVKP KPQQEPPKTI SFSKAVDAQK
301: QAGGEERRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPK ISKMDKASLL SDAIAYIQEL EERLRGGAAG PAPARAETGP SVEVKTMQDE
401: VVLRVSTPLE AHPISGALSA MRDSQLSVVA SSMAVADDTV THTLVVRSAG PERLTAETVL AAISRGMMMS ATPSP

Best Arabidopsis Sequence Match ( AT2G46510.1 )
(BLAST)

001: MNMSDLGWDD EDKSVVSAVL GHLASDFLRA NSNSNQNLFL VMGTDDTLNK KLSSLVDWPN SENFSWNYAI FWQQTMSRSG QQVLGWGDGC CREPNEEEES
101: KVVRSYNFNN MGAEEETWQD MRKRVLQKLH RLFGGSDEDN YALSLEKVTA TEIFFLASMY FFFNHGEGGP GRCYSSGKHV WLSDAVNSES DYCFRSFMAK
201: SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG
301: PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE
401: RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAISYIKEL QEKVKIMEDE RVGTDKSLSE SNTITVEESP EVDIQAMNEE VVVRVISPLD SHPASRIIQA
501: MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL IAAFYPETSS TQPPLPSSSS QVSGDI

Arabidopsis Description

AIBTranscription factor ABA-INDUCIBLE bHLH-TYPE [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.