Factsheet for Os01t0705700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G288700.1	Wheat	nucleus	73.04	75.85
TraesCS3D01G253700.1	Wheat	nucleus	75.22	74.41
HORVU3Hr1G066390.1	Barley	nucleus	75.0	74.19
TraesCS3A01G252900.1	Wheat	nucleus	73.48	73.64
EES01345	Sorghum	nucleus	76.52	72.73
Zm00001d043706_P001	Maize	nucleus	73.26	72.16
TraesCS3B01G284800.1	Wheat	nucleus	74.35	72.0
Bra038458.1-P	Field mustard	nucleus	34.13	34.81
CDY32242	Canola	nucleus	34.13	34.81
CDY34468	Canola	nucleus	33.91	34.59
AT4G16430.1	Thale cress	nucleus	34.78	34.26
VIT_07s0141g01060.t01	Wine grape	nucleus	36.52	34.22
PGSC0003DMT400051672	Potato	nucleus	35.0	33.75
Bra012720.1-P	Field mustard	nucleus	33.26	33.55
CDX90525	Canola	nucleus	33.26	33.55
Solyc06g083980.1.1	Tomato	nucleus	34.35	33.12
KRH19522	Soybean	nucleus	35.65	32.41
KRH32144	Soybean	nucleus	35.22	32.14
Os01t0235700-01	Rice	nucleus	42.17	31.44
CDY09695	Canola	nucleus	31.3	29.57
Os09t0519100-00	Rice	nucleus	16.52	28.79
Os01t0577300-00	Rice	cytosol	7.61	28.69
Os08t0543700-00	Rice	nucleus, peroxisome, plastid	16.3	28.52
Os10t0575000-01	Rice	nucleus	35.22	23.18
Os04t0557500-00	Rice	mitochondrion, plasma membrane	8.91	22.78
Os04t0557200-01	Rice	cytosol, nucleus, peroxisome	22.83	18.78
Os04t0557800-00	Rice	mitochondrion	22.17	17.77
Os01t0576100-00	Rice	nucleus	11.3	16.56
Os03t0229100-00	Rice	plastid	9.78	15.73
Os12t0632600-00	Rice	nucleus	11.3	14.77
Os03t0671800-01	Rice	nucleus	11.52	13.77
Os10t0104300-00	Rice	nucleus	9.78	13.76
Os03t0725800-01	Rice	nucleus	10.65	13.65
Os07t0211500-00	Rice	nucleus	13.91	13.39
Os11t0258700-00	Rice	mitochondrion	13.04	12.42
Os03t0671000-00	Rice	mitochondrion	3.7	6.69

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	ProteinID:BAD81581.1	ProteinID:BAD82250.1	ProteinID:BAF05926.1	ProteinID:BAS73932.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0010629	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	InterPro:MYC/MYB_N	EnsemblPlantsGene:Os01g0705700	EnsemblPlants:Os01t0705700-01	PFAM:PF00010
PFAM:PF14215	PFscan:PS50888	PANTHER:PTHR11514	PANTHER:PTHR11514:SF59	UniProt:Q5N8F6	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000049E7EF	InterPro:bHLH_dom	SEG:seg	:	:

Description

inducer of CBF expression 1, basic helix-loop-helix protein 010, OsMYC2-like protein 1, MYC2-like protein 1Similar to Transcription factor ICE1 (Inducer of CBF expression 1) (Basic helix- loop-helix protein 116) (bHLH116) (AtbHLH116). (Os01t0705700-01)

Coordinates

chr1:+:29271158..29273175

Molecular Weight (calculated)

49268.4 Da

IEP (calculated)

7.796

GRAVY (calculated)

-0.321

Length

460 amino acids

Sequence
(BLAST)

001: MSWSETDAAL FAAVLGHDAA HHLATTPPHL DAPEGSPSSA ELQASLHDLV ERQGGAWTYG IFWQESRGAG AASGRAARAV LGWGDGHCRD GAGHGEVGAA
101: ERSVARKRVL LRLHALYGGG DEDGADYALR LDRVTGAEMY FLASMYFSFP EGSGGPGRAL ASGRHAWADV DPHPSGSGSA PGWYVRSSLA QSAGLRTVVF
201: LPCKGGVLEL GSVVAIRETP EVLRAIQSAM RAVPAPPEDF MRIFGKDLSP GRPSQPMGCD APWTPRLVVQ TTPVRPAKSL DFSKANVQEQ AGGQERRPRK
301: RGRKPANGRE EPLNHVEAER QRREKLNQRF YALRAVVPKI SKMDKASLLS DAIAYIQELE ARLRGDAPVP ARADGPAVEV KAMQDEVVLR VTTPLDEHPI
401: SRVFHAMRES QISVVASDVA VSDDAVTHTL MVRSAGPERL TAETVLAAMS RGVSVTTPSP

Best Arabidopsis Sequence Match ( AT4G16430.1 )
(BLAST)

001: MGQKFWENQE DRAMVESTIG SEACDFFIST ASASNTALSK LVSPPSDSNL QQGLRHVVEG SDWDYALFWL ASNVNSSDGC VLIWGDGHCR VKKGASGEDY
101: SQQDEIKRRV LRKLHLSFVG SDEDHRLVKS GALTDLDMFY LASLYFSFRC DTNKYGPAGT YVSGKPLWAA DLPSCLSYYR VRSFLARSAG FQTVLSVPVN
201: SGVVELGSLR HIPEDKSVIE MVKSVFGGSD FVQAKEAPKI FGRQLSLGGA KPRSMSINFS PKTEDDTGFS LESYEVQAIG GSNQVYGYEQ GKDETLYLTD
301: EQKPRKRGRK PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLADAIT YITDMQKKIR VYETEKQIMK RRESNQITPA EVDYQQRHDD
401: AVVRLSCPLE THPVSKVIQT LRENEVMPHD SNVAITEEGV VHTFTLRPQG GCTAEQLKDK LLASLSQ

Arabidopsis Description

BHLH3Transcription factor bHLH3 [Source:UniProtKB/Swiss-Prot;Acc:O23487]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.