Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:
  • nucleus 3
  • plastid 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
 mitochondrion: 15069638
plasma membrane: 15069638
msms PMID: 15069638 doi
N Tanaka, M Fujita, H Handa, S Murayama, M Uemura, Y Kawamura, T Mitsui, S Mikami, Y Tozawa, T Yoshinaga, S Komatsu
Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0127450-00
Os01t0576100-00
Os01t0577300-00
Os01t0695900-01
Os02t0682500-01
Os04t0557200-01
Os04t0557500-00
Os04t0557800-00
Os11t0258700-00

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G63650.1 Os01t0576100-00 AT1G63650.1 12917293
AT1G63650.1 Os01t0577300-00 AT1G63650.1 12917293
AT1G63650.1 Os04t0557200-01 AT1G63650.1 12917293
AT1G63650.1 Os04t0557500-00 AT1G63650.1 12917293
AT1G63650.1 Os04t0557800-00 AT1G63650.1 12917293
AT1G63650.1 Os11t0258700-00 AT1G63650.1 12917293
AT1G63650.1 Os01t0127450-00 AT1G71030.1 15361138
AT1G63650.1 Os01t0695900-01 AT3G13540.1 15361138
AT1G63650.1 Os02t0682500-01 AT5G24520.1 12917293
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os04t0557200-01 Rice cytosol, nucleus, peroxisome 78.33 25.22
Os04t0557800-00 Rice mitochondrion 62.22 19.51
GSMUA_Achr11P... Banana nucleus 48.33 18.47
CDX77694 Canola nucleus 24.44 17.39
GSMUA_Achr8P11430_001 Banana nucleus 48.89 16.12
GSMUA_Achr11P... Banana nucleus 48.89 14.84
GSMUA_Achr11P... Banana nucleus 45.0 14.67
VIT_02s0025g03450.t01 Wine grape nucleus 49.44 14.17
Bra027653.1-P Field mustard nucleus 46.11 13.93
Solyc08g081140.2.1 Tomato nucleus 48.33 13.9
AT1G63650.1 Thale cress nucleus 45.56 13.76
VIT_15s0046g02560.t01 Wine grape nucleus 50.0 13.66
Bra027796.1-P Field mustard nucleus 45.56 13.53
Bra025508.1-P Field mustard nucleus 47.22 13.51
AT5G41315.2 Thale cress nucleus 48.33 13.49
KRH59908 Soybean nucleus 46.11 13.15
KRH41187 Soybean nucleus 45.0 12.86
Os07t0211500-00 Rice nucleus 33.89 12.76
KRH65046 Soybean nucleus 43.33 12.06
AT4G00480.2 Thale cress nucleus 38.33 11.9
KRH48144 Soybean nucleus 42.78 11.85
GSMUA_Achr5P20600_001 Banana nucleus 36.67 11.22
Bra000970.1-P Field mustard nucleus 38.89 10.7
Os01t0705700-01 Rice nucleus 22.78 8.91
Bra037343.1-P Field mustard cytosol 32.78 8.3
Os01t0235700-01 Rice nucleus 22.22 6.48
Os10t0575000-01 Rice nucleus 25.0 6.44
Os08t0543700-00 Rice nucleus, peroxisome, plastid 6.11 4.18
Os03t0671000-00 Rice mitochondrion 5.56 3.94
Os03t0725800-01 Rice nucleus 7.22 3.62
Os09t0519100-00 Rice nucleus 5.0 3.41
Os03t0671800-01 Rice nucleus 7.22 3.38
Os12t0632600-00 Rice nucleus 6.11 3.12
Os11t0258700-00 Rice mitochondrion 6.11 2.28
Os03t0229100-00 Rice plastid 2.78 1.75
Os01t0576100-00 Rice nucleus 2.78 1.59
Os10t0104300-00 Rice nucleus 2.78 1.53
PGSC0003DMT400032140 Potato nucleus 2.22 1.11
Os01t0577300-00 Rice cytosol 0.56 0.82
Protein Annotations
EnsemblPlants:Os04t0557500-00EnsemblPlantsGene:Os04g0557500GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0046983
InterPro:MYC/MYB_NPANTHER:PTHR11514PANTHER:PTHR11514:SF94PFAM:PF14215ProteinID:BAS90445.1SEG:seg
UniParc:UPI000393AD29UniProt:A0A0P0WDK6MapMan:35.1:::
Description
PURPLE LEAFSimilar to Transcriptional activator Ra homolog (Fragment). (Os04t0557500-00)
Coordinates
chr4:-:27915598..27939357
Molecular Weight (calculated)
20261.6 Da
IEP (calculated)
6.104
GRAVY (calculated)
-0.401
Length
180 amino acids
Sequence
(BLAST)
001: MASAPPVQEE ALQPGTNHFR SRLAAAVRSI SWSYTIFWST STSLPGVLTW NDGFYNGEVK TRKISNLEDL TADQLVLRRS EQLSELYYSL LSGECDHRAR
101: KPVAALSPED IADTEWYYVV CMTYAFRPGQ GLPGRSYASN RSVWLCNAQS ADSKTLSTCA LSEERVYSDN CLHPLHEWRA
Best Arabidopsis Sequence Match ( AT5G41315.3 )
(BLAST)
001: MDEETMATGQ NRTTVPENLK KHLAVSVRNI QWSYGIFWSV SASQSGVLEW GDGYYNGDIK TRKTIQASEI KADQLGLRRS EQLSELYESL SVAESSSSGV
101: AAGSQVTRRA SAAALSPEDL ADTEWYYLVC MSFVFNIGEG MPGRTFANGE PIWLCNAHTA DSKVFSRSLL AKSAAVKTVV CFPFLGGVVE IGTTEHITED
201: MNVIQCVKTS FLEAPDPYAT ILPARSDYHI DNVLDPQQIL GDEIYAPMFS TEPFPTASPS RTTNGFDQEH EQVADDHDSF MTERITGGAS QVQSWQLMDD
301: ELSNCVHQSL NSSDCVSQTF VEGAAGRVAY GARKSRVQRL GQIQEQQRNV KTLSFDPRND DVHYQSVIST IFKTNHQLIL GPQFRNCDKQ SSFTRWKKSS
401: SSSSGTATVT APSQGMLKKI IFDVPRVHQK EKLMLDSPEA RDETGNHAVL EKKRREKLNE RFMTLRKIIP SINKIDKVSI LDDTIEYLQE LERRVQELES
501: CRESTDTETR GTMTMKRKKP CDAGERTSAN CANNETGNGK KVSVNNVGEA EPADTGFTGL TDNLRIGSFG NEVVIELRCA WREGVLLEIM DVISDLHLDS
601: HSVQSSTGDG LLCLTVNCKH KGSKIATPGM IKEALQRVAW IC
Arabidopsis Description
GL3Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1R7T3F7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.