Factsheet for Os11t0258700-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0127450-00
Os01t0576100-00
Os01t0577300-00
Os01t0695900-01
Os02t0682500-01
Os04t0557200-01
Os04t0557500-00
Os04t0557800-00
Os11t0258700-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G63650.1	Os01t0576100-00	AT1G63650.1	12917293
AT1G63650.1	Os01t0577300-00	AT1G63650.1	12917293
AT1G63650.1	Os04t0557200-01	AT1G63650.1	12917293
AT1G63650.1	Os04t0557500-00	AT1G63650.1	12917293
AT1G63650.1	Os04t0557800-00	AT1G63650.1	12917293
AT1G63650.1	Os11t0258700-00	AT1G63650.1	12917293
AT1G63650.1	Os01t0127450-00	AT1G71030.1	15361138
AT1G63650.1	Os01t0695900-01	AT3G13540.1	15361138
AT1G63650.1	Os02t0682500-01	AT5G24520.1	12917293

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0557800-00	Rice	mitochondrion	73.29	61.67
Os01t0577300-00	Rice	cytosol	11.59	45.9
Os01t0576100-00	Rice	nucleus	28.16	43.31
OQU82119	Sorghum	nucleus	41.41	36.63
Os04t0557200-01	Rice	cytosol, nucleus, peroxisome	40.99	35.42
OQU81560	Sorghum	nucleus	40.79	33.45
OQU82120	Sorghum	nucleus	39.96	32.82
OQU82117	Sorghum	nucleus	39.34	32.2
Zm00001d000236_P001	Maize	nucleus, plastid	36.44	31.6
Zm00001d026147_P002	Maize	nucleus	39.34	30.84
PGSC0003DMT400032140	Potato	nucleus	16.56	22.22
GSMUA_Achr11P...	Banana	nucleus	21.53	22.08
GSMUA_Achr5P20600_001	Banana	nucleus	26.09	21.43
GSMUA_Achr8P11430_001	Banana	nucleus	23.4	20.7
GSMUA_Achr11P...	Banana	nucleus	22.77	19.93
GSMUA_Achr11P...	Banana	nucleus	23.4	19.06
VIT_02s0025g03450.t01	Wine grape	nucleus	24.22	18.63
KRH41187	Soybean	nucleus	23.4	17.94
VIT_15s0046g02560.t01	Wine grape	nucleus	23.6	17.3
KRH59908	Soybean	nucleus	22.57	17.27
Solyc08g081140.2.1	Tomato	nucleus	22.36	17.25
AT1G63650.1	Thale cress	nucleus	21.12	17.11
Bra027653.1-P	Field mustard	nucleus	20.91	16.95
Os08t0543700-00	Rice	nucleus, peroxisome, plastid	9.11	16.73
Bra027796.1-P	Field mustard	nucleus	20.5	16.34
Os09t0519100-00	Rice	nucleus	8.9	16.29
Bra025508.1-P	Field mustard	nucleus	20.5	15.74
AT5G41315.2	Thale cress	nucleus	20.91	15.66
KRH48144	Soybean	nucleus	20.5	15.23
Os03t0229100-00	Rice	plastid	8.7	14.69
KRH65046	Soybean	nucleus	19.67	14.68
AT4G00480.2	Thale cress	nucleus	16.36	13.62
Os01t0705700-01	Rice	nucleus	12.42	13.04
Bra000970.1-P	Field mustard	nucleus	16.77	12.39
Os10t0104300-00	Rice	nucleus	7.87	11.62
Bra037343.1-P	Field mustard	cytosol	16.15	10.97
Os10t0575000-01	Rice	nucleus	15.73	10.87
Os03t0725800-01	Rice	nucleus	8.07	10.86
Os12t0632600-00	Rice	nucleus	7.87	10.8
Os01t0235700-01	Rice	nucleus	13.04	10.21
Os03t0671800-01	Rice	nucleus	8.07	10.13
Os07t0211500-00	Rice	nucleus	8.7	8.79
Os04t0557500-00	Rice	mitochondrion, plasma membrane	2.28	6.11
Os03t0671000-00	Rice	mitochondrion	2.69	5.12

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:A0A0P0Y0X8	ProteinID:BAT13485.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
InterPro:MYC/MYB_N	EnsemblPlantsGene:Os11g0258700	EnsemblPlants:Os11t0258700-00	PFAM:PF14215	PANTHER:PTHR11514	PANTHER:PTHR11514:SF94
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0003939CDE	InterPro:bHLH_dom	SEG:seg	:

Description

basic helix-loop-helix protein 014Similar to Helix-loop-helix DNA-binding domain containing protein. (Os11t0258700-00)

Coordinates

chr11:-:8583891..8587507

Molecular Weight (calculated)

52412.4 Da

IEP (calculated)

5.061

GRAVY (calculated)

-0.147

Length

483 amino acids

Sequence
(BLAST)

001: MRSSHRRRFF VSFAPKSSPP ASTCVDLPPA AHNELRSSAN KSSFTHTIVC VPFIMHGVLE LGTTDPVSED PALVDRITAS LWDTPPRAAF SSEAGVADIV
101: VFEDLDHGNT AVEATTTMVP GEPEPHAVAG GEVAECESNA HNDLEQITMD DIGELYSLCE ELDVLDDDSS SWVADPWSSF QLVPTAEATD VDDAVVAALG
201: AIDGSCRPSP SSFVAWKRTP DSDEVQAVPL ISGEPPQKLL KKAVAGAGAW MNNADGSAAT MTTDQGSSIK NHVMSERRRR EKLKEIRSEF MRCLLLQVDK
301: ASILAETIAY LKELEKRVEE LESSSQPSPR PMETTRRRCC KSTGKKVSAG ARAKRKAPAP EDTDGERRHC VSNVNVTIMD NKELLLELQC QWKELLMTRV
401: FDAIKGVSLD VLSVQASTSD GLLGLKIQAK VVVSAAKSSQ QICSIVYLSI YQSLYLRLFG VLILAILLLH ACSLPHLLPS NLG

Best Arabidopsis Sequence Match ( AT1G63650.3 )
(BLAST)

001: MATGENRTVP DNLKKQLAVS VRNIQWSYGI FWSVSASQPG VLEWGDGYYN GDIKTRKTIQ AAEVKIDQLG LERSEQLREL YESLSLAESS ASGSSQVTRR
101: ASAAALSPED LTDTEWYYLV CMSFVFNIGE GIPGGALSNG EPIWLCNAET ADSKVFTRSL LAKSASLQTV VCFPFLGGVL EIGTTEHIKE DMNVIQSVKT
201: LFLEAPPYTT ISTRSDYQEI FDPLSDDKYT PVFITEAFPT TSTSGFEQEP EDHDSFINDG GASQVQSWQF VGEEISNCIH QSLNSSDCVS QTFVGTTGRL
301: ACDPRKSRIQ RLGQIQEQSN HVNMDDDVHY QGVISTIFKT THQLILGPQF QNFDKRSSFT RWKRSSSVKT LGEKSQKMIK KILFEVPLMN KKEELLPDTP
401: EETGNHALSE KKRREKLNER FMTLRSIIPS ISKIDKVSIL DDTIEYLQDL QKRVQELESC RESADTETRI TMMKRKKPDD EEERASANCM NSKRKGSDVN
501: VGEDEPADIG YAGLTDNLRI SSLGNEVVIE LRCAWREGIL LEIMDVISDL NLDSHSVQSS TGDGLLCLTV NCKHKGTKIA TTGMIQEALQ RVAWIC

Arabidopsis Description

BHLH2EGL3 [Source:UniProtKB/TrEMBL;Acc:A0A178W1W8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.