Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU82117 | Sorghum | nucleus | 63.55 | 58.81 |
| OQU81560 | Sorghum | nucleus | 62.27 | 57.73 |
| OQU82120 | Sorghum | nucleus | 61.72 | 57.31 |
| Zm00001d000236_P001 | Maize | nucleus, plastid | 56.78 | 55.66 |
| TraesCSU01G237100.1 | Wheat | nucleus | 37.0 | 55.04 |
| TraesCSU01G228400.1 | Wheat | nucleus | 37.0 | 55.04 |
| Os01t0577300-00 | Rice | cytosol | 11.9 | 53.28 |
| TraesCS2D01G406900.1 | Wheat | nucleus | 48.35 | 46.56 |
| TraesCS4B01G397300.1 | Wheat | nucleus | 34.25 | 45.95 |
| HORVU2Hr1G096810.5 | Barley | nucleus | 45.97 | 44.74 |
| TraesCS2A01G409600.2 | Wheat | nucleus, plastid | 45.42 | 44.44 |
| Os01t0576100-00 | Rice | nucleus | 25.46 | 44.27 |
| TraesCS2B01G428000.1 | Wheat | nucleus | 46.34 | 44.15 |
| TraesCS2A01G409400.1 | Wheat | nucleus | 44.87 | 43.13 |
| Os04t0557200-01 | Rice | cytosol, nucleus, peroxisome | 42.86 | 41.86 |
| Os04t0557800-00 | Rice | mitochondrion | 43.77 | 41.64 |
| Os11t0258700-00 | Rice | mitochondrion | 36.63 | 41.41 |
| TraesCS4B01G397400.1 | Wheat | nucleus | 42.49 | 41.13 |
| TraesCS4D01G224600.1 | Wheat | nucleus | 41.76 | 40.93 |
| TraesCSU01G029400.1 | Wheat | nucleus | 41.94 | 40.03 |
| TraesCS2D01G406800.1 | Wheat | plastid | 34.07 | 40.0 |
| TraesCS5A01G489500.1 | Wheat | nucleus | 41.58 | 39.82 |
| TraesCS5A01G558500.1 | Wheat | nucleus | 42.12 | 39.32 |
| TraesCSU01G116000.1 | Wheat | nucleus | 31.87 | 38.16 |
| TraesCS2D01G575600.3 | Wheat | nucleus, plastid | 40.48 | 37.52 |
| TraesCS4B01G397800.1 | Wheat | nucleus | 33.15 | 35.49 |
| GSMUA_Achr11P... | Banana | nucleus | 26.74 | 31.0 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 28.21 | 28.21 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 27.66 | 25.68 |
| PGSC0003DMT400032140 | Potato | nucleus | 16.85 | 25.56 |
| GSMUA_Achr11P... | Banana | nucleus | 25.09 | 24.82 |
| GSMUA_Achr11P... | Banana | nucleus | 26.37 | 24.28 |
| VIT_02s0025g03450.t01 | Wine grape | nucleus | 27.11 | 23.57 |
| VIT_15s0046g02560.t01 | Wine grape | nucleus | 27.47 | 22.76 |
| KRH41187 | Soybean | nucleus | 25.64 | 22.22 |
| Solyc08g081140.2.1 | Tomato | nucleus | 25.27 | 22.04 |
| AT1G63650.1 | Thale cress | nucleus | 23.81 | 21.81 |
| KRH59908 | Soybean | nucleus | 24.91 | 21.55 |
| Bra027653.1-P | Field mustard | nucleus | 23.26 | 21.31 |
| Bra027796.1-P | Field mustard | nucleus | 23.44 | 21.12 |
| Bra025508.1-P | Field mustard | nucleus | 24.18 | 20.99 |
| OQU80776 | Sorghum | nucleus | 9.71 | 20.15 |
| OQU75588 | Sorghum | nucleus | 9.71 | 20.15 |
| KRH48144 | Soybean | nucleus | 23.08 | 19.38 |
| KRH65046 | Soybean | nucleus | 22.89 | 19.32 |
| AT5G41315.2 | Thale cress | nucleus | 22.71 | 19.22 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 9.52 | 18.84 |
| OQU86344 | Sorghum | nucleus | 8.79 | 18.75 |
| OQU80778 | Sorghum | nucleus | 8.97 | 18.15 |
| OQU88697 | Sorghum | nucleus | 22.34 | 18.02 |
| KXG25462 | Sorghum | nucleus | 9.16 | 17.99 |
| EER99201 | Sorghum | nucleus | 9.52 | 17.57 |
| AT4G00480.2 | Thale cress | nucleus | 18.32 | 17.24 |
| OQU80777 | Sorghum | nucleus | 8.79 | 17.14 |
| EES01345 | Sorghum | nucleus | 15.02 | 16.94 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 8.61 | 16.85 |
| KXG39824 | Sorghum | nucleus | 9.71 | 16.26 |
| OQU92034 | Sorghum | nucleus | 9.16 | 15.77 |
| EER93685 | Sorghum | mitochondrion | 10.62 | 15.59 |
| EES10849 | Sorghum | nucleus | 9.52 | 15.07 |
| Bra000970.1-P | Field mustard | nucleus | 17.22 | 14.37 |
| KXG37671 | Sorghum | nucleus | 9.34 | 14.33 |
| OQU92032 | Sorghum | nucleus | 8.61 | 13.82 |
| KXG37866 | Sorghum | nucleus | 9.34 | 13.75 |
| Bra037343.1-P | Field mustard | cytosol | 17.03 | 13.08 |
| EER99993 | Sorghum | nucleus | 14.29 | 12.54 |
| EER93684 | Sorghum | nucleus | 8.79 | 12.47 |
| EES19274 | Sorghum | nucleus | 12.82 | 11.93 |
| KXG24110 | Sorghum | nucleus | 8.61 | 11.81 |
| OQU77369 | Sorghum | nucleus | 8.61 | 11.19 |
| OQU75589 | Sorghum | nucleus | 7.88 | 11.17 |
| KXG39194 | Sorghum | nucleus | 14.29 | 11.03 |
| CDX77694 | Canola | nucleus | 4.58 | 9.88 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1Z5REW9 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N |
| EnsemblPlants:OQU82119 | ProteinID:OQU82119 | ProteinID:OQU82119.1 | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF94 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3006G175500 | SUPFAM:SSF47459 | UniParc:UPI000B4238DD |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:53062306..53080184
Molecular Weight (calculated)
59643.8 Da
IEP (calculated)
6.394
GRAVY (calculated)
-0.469
Length
546 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGRVLQRRG EDEEDLQLRG VDSRPARHAE KRAAPGAVRS PPVRRVRPPR GAGAAGRLAV AGGPRRHRVV LRHLHDLRLP AWPRVAGQEF REQRACLAVQ
101: RAARRQQSLP PRAPSQVPTT VKQSASIQSI ICIPLMGGVL ELGTTDTVLE DPDLVSRATA AFWEPQCPTY LEEQEPSPSS NTPSANETSE AAADADDIVV
201: FEDLDHNAME METITAVVEG HGQELREAES LSNASLEHIT KEIDEFYSLC EEMDVQPLED GWIMDGSNFE VPSSPQPTPP GNLADGSRAT SFMAWTRSSQ
301: SCSDEAVAAV PVIEEPQKLL KKVVAGGGAW ANCGGGGVGT STTGAAQESG VKNHVMSERK RREKLNEMFL ILKSLVPSIH KVDKASILAE TIAYLKELQR
401: RVQELESSRE LTSRPSETTR PITRQHGNKE SVRKKLCAGS KRKSPEFGGD AEKEHDPWVL PKDGTSNVTV AVSDRDVLLE VQCRWEELLM TRVFDAIKGL
501: HLDVLSVQAS APDGFMGLKI RAQFAGSGAV VPWMISEALR KAIGKR
101: RAARRQQSLP PRAPSQVPTT VKQSASIQSI ICIPLMGGVL ELGTTDTVLE DPDLVSRATA AFWEPQCPTY LEEQEPSPSS NTPSANETSE AAADADDIVV
201: FEDLDHNAME METITAVVEG HGQELREAES LSNASLEHIT KEIDEFYSLC EEMDVQPLED GWIMDGSNFE VPSSPQPTPP GNLADGSRAT SFMAWTRSSQ
301: SCSDEAVAAV PVIEEPQKLL KKVVAGGGAW ANCGGGGVGT STTGAAQESG VKNHVMSERK RREKLNEMFL ILKSLVPSIH KVDKASILAE TIAYLKELQR
401: RVQELESSRE LTSRPSETTR PITRQHGNKE SVRKKLCAGS KRKSPEFGGD AEKEHDPWVL PKDGTSNVTV AVSDRDVLLE VQCRWEELLM TRVFDAIKGL
501: HLDVLSVQAS APDGFMGLKI RAQFAGSGAV VPWMISEALR KAIGKR
001: MDEETMATGQ NRTTVPENLK KHLAVSVRNI QWSYGIFWSV SASQSGVLEW GDGYYNGDIK TRKTIQASEI KADQLGLRRS EQLSELYESL SVAESSSSGV
101: AAGSQVTRRA SAAALSPEDL ADTEWYYLVC MSFVFNIGEG MPGRTFANGE PIWLCNAHTA DSKVFSRSLL AKSAAVKTVV CFPFLGGVVE IGTTEHITED
201: MNVIQCVKTS FLEAPDPYAT ILPARSDYHI DNVLDPQQIL GDEIYAPMFS TEPFPTASPS RTTNGFDQEH EQVADDHDSF MTERITGGAS QVQSWQLMDD
301: ELSNCVHQSL NSSDCVSQTF VEGAAGRVAY GARKSRVQRL GQIQEQQRNV KTLSFDPRND DVHYQSVIST IFKTNHQLIL GPQFRNCDKQ SSFTRWKKSS
401: SSSSGTATVT APSQGMLKKI IFDVPRVHQK EKLMLDSPEA RDETGNHAVL EKKRREKLNE RFMTLRKIIP SINKIDKVSI LDDTIEYLQE LERRVQELES
501: CRESTDTETR GTMTMKRKKP CDAGERTSAN CANNETGNGK KVSVNNVGEA EPADTGFTGL TDNLRIGSFG NEVVIELRCA WREGVLLEIM DVISDLHLDS
601: HSVQSSTGDG LLCLTVNCKH KGSKIATPGM IKEALQRVAW IC
101: AAGSQVTRRA SAAALSPEDL ADTEWYYLVC MSFVFNIGEG MPGRTFANGE PIWLCNAHTA DSKVFSRSLL AKSAAVKTVV CFPFLGGVVE IGTTEHITED
201: MNVIQCVKTS FLEAPDPYAT ILPARSDYHI DNVLDPQQIL GDEIYAPMFS TEPFPTASPS RTTNGFDQEH EQVADDHDSF MTERITGGAS QVQSWQLMDD
301: ELSNCVHQSL NSSDCVSQTF VEGAAGRVAY GARKSRVQRL GQIQEQQRNV KTLSFDPRND DVHYQSVIST IFKTNHQLIL GPQFRNCDKQ SSFTRWKKSS
401: SSSSGTATVT APSQGMLKKI IFDVPRVHQK EKLMLDSPEA RDETGNHAVL EKKRREKLNE RFMTLRKIIP SINKIDKVSI LDDTIEYLQE LERRVQELES
501: CRESTDTETR GTMTMKRKKP CDAGERTSAN CANNETGNGK KVSVNNVGEA EPADTGFTGL TDNLRIGSFG NEVVIELRCA WREGVLLEIM DVISDLHLDS
601: HSVQSSTGDG LLCLTVNCKH KGSKIATPGM IKEALQRVAW IC
Arabidopsis Description
GL3Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1R7T3F7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.