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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 3
  • cytosol 1
  • mitochondrion 2
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G409400.1
TraesCS2A01G409600.2
TraesCS2B01G428000.1
TraesCS2D01G406800.1
TraesCS2D01G406900.1
TraesCS2D01G575600.3
TraesCS3A01G046800.1
TraesCS3A01G257800.1
TraesCS3B01G036000.1
TraesCS3B01G290600.1
TraesCS3D01G033100.1
TraesCS3D01G257800.1
TraesCS4B01G397300.1
TraesCS4B01G397400.1
TraesCS4B01G397800.1
TraesCS4D01G224600.1
TraesCS5A01G489500.1
TraesCS5A01G558500.1
TraesCS6A01G259400.1
TraesCS6B01G286700.1
TraesCSU01G029400.1
TraesCSU01G116000.1
TraesCSU01G228400.1
TraesCSU01G237100.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G63650.1 TraesCS2A01G409400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2A01G409600.2 AT1G63650.1 12917293
AT1G63650.1 TraesCS2B01G428000.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2D01G406800.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2D01G406900.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS2D01G575600.3 AT1G63650.1 12917293
AT1G63650.1 TraesCS4B01G397300.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS4B01G397400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS4B01G397800.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS4D01G224600.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS5A01G489500.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS5A01G558500.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G029400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G116000.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G228400.1 AT1G63650.1 12917293
AT1G63650.1 TraesCSU01G237100.1 AT1G63650.1 12917293
AT1G63650.1 TraesCS3A01G046800.1 AT1G71030.1 15361138
AT1G63650.1 TraesCS3B01G036000.1 AT1G71030.1 15361138
AT1G63650.1 TraesCS3D01G033100.1 AT1G71030.1 15361138
AT1G63650.1 TraesCS3A01G257800.1 AT3G13540.1 15361138
AT1G63650.1 TraesCS3B01G290600.1 AT3G13540.1 15361138
AT1G63650.1 TraesCS3D01G257800.1 AT3G13540.1 15361138
AT1G63650.1 TraesCS6A01G259400.1 AT5G24520.1 12917293
AT1G63650.1 TraesCS6B01G286700.1 AT5G24520.1 12917293
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G397400.1 Wheat nucleus 84.72 88.48
TraesCS2D01G406900.1 Wheat nucleus 60.44 62.79
HORVU2Hr1G096810.5 Barley nucleus 58.91 61.85
TraesCS2D01G406800.1 Wheat plastid 46.86 59.35
TraesCS4D01G224600.1 Wheat nucleus 55.18 58.35
OQU81560 Sorghum nucleus 51.1 51.1
OQU82120 Sorghum nucleus 50.93 51.02
Os01t0577300-00 Rice cytosol 10.53 50.82
OQU82117 Sorghum nucleus 50.76 50.68
Zm00001d026147_P002 Maize nucleus 51.44 49.19
Zm00001d000236_P001 Maize nucleus, plastid 46.18 48.83
GSMUA_Achr11P... Banana nucleus 35.14 43.95
Os01t0576100-00 Rice nucleus 21.9 41.08
TraesCS1D01G094000.1 Wheat cytosol, mitochondrion, nucleus, plastid 13.75 40.5
OQU82119 Sorghum nucleus 37.52 40.48
GSMUA_Achr8P11430_001 Banana nucleus 36.33 39.19
GSMUA_Achr11P... Banana nucleus 34.97 37.32
GSMUA_Achr11P... Banana nucleus 36.33 36.09
GSMUA_Achr5P20600_001 Banana nucleus 34.8 34.86
VIT_02s0025g03450.t01 Wine grape nucleus 34.3 32.17
KRH41187 Soybean nucleus 33.96 31.75
Solyc08g081140.2.1 Tomato nucleus 33.11 31.15
VIT_15s0046g02560.t01 Wine grape nucleus 34.8 31.11
AT1G63650.1 Thale cress nucleus 31.24 30.87
KRH59908 Soybean nucleus 32.94 30.74
Bra027653.1-P Field mustard nucleus 30.39 30.03
Bra027796.1-P Field mustard nucleus 30.9 30.03
Bra025508.1-P Field mustard nucleus 31.58 29.57
KRH65046 Soybean nucleus 31.58 28.75
AT5G41315.2 Thale cress nucleus 31.07 28.37
KRH48144 Soybean nucleus 30.56 27.69
CDX77694 Canola nucleus 11.71 27.27
AT4G00480.2 Thale cress nucleus 25.64 26.03
PGSC0003DMT400032140 Potato nucleus 14.43 23.61
Bra000970.1-P Field mustard nucleus 25.81 23.24
TraesCS3D01G253700.1 Wheat nucleus 18.0 22.8
TraesCS4D01G306400.1 Wheat nucleus 6.11 21.82
TraesCS1D01G094200.1 Wheat nucleus 22.24 20.76
Bra037343.1-P Field mustard cytosol 23.77 19.69
TraesCS1D01G374800.1 Wheat nucleus 8.83 19.62
TraesCS5D01G313700.1 Wheat nucleus 9.0 19.27
TraesCS5D01G313400.1 Wheat nucleus 8.66 18.68
TraesCS5D01G313500.1 Wheat nucleus 8.83 18.64
TraesCS7D01G102200.1 Wheat nucleus 7.98 18.36
TraesCS4D01G235900.1 Wheat nucleus 10.02 18.32
TraesCS5D01G313600.1 Wheat nucleus 8.66 18.28
TraesCS4D01G275500.1 Wheat nucleus 18.17 17.89
TraesCS1D01G196900.1 Wheat nucleus 20.88 17.7
TraesCS3D01G166300.2 Wheat nucleus 18.34 17.28
TraesCS4D01G330500.1 Wheat nucleus 9.17 17.09
TraesCS4D01G018800.2 Wheat nucleus 9.68 15.75
TraesCS4D01G306300.1 Wheat nucleus 9.0 15.54
TraesCS5D01G517900.1 Wheat nucleus 8.49 15.43
TraesCS4D01G018700.1 Wheat nucleus 9.34 15.24
TraesCS4D01G019200.1 Wheat nucleus 9.0 14.72
TraesCS4D01G019100.1 Wheat nucleus 9.0 14.56
TraesCS4D01G056900.2 Wheat nucleus 9.17 14.4
TraesCS5D01G020600.1 Wheat nucleus 9.0 14.17
TraesCS3D01G014900.1 Wheat nucleus 7.64 13.39
Protein Annotations
EnsemblPlants:TraesCS2D01G575600.3EnsemblPlantsGene:TraesCS2D01G575600Gene3D:4.10.280.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638InterPro:MYC/MYB_NInterPro:bHLH_dom
ncoils:CoilPANTHER:PTHR11514PANTHER:PTHR11514:SF94PFAM:PF00010PFAM:PF14215PFscan:PS50888
SMART:SM00353SUPFAM:SSF47459TIGR:cd00083MapMan:15.5.32::
Description
No Description!
Coordinates
chr2D:-:639529624..639535060
Molecular Weight (calculated)
66178.7 Da
IEP (calculated)
5.034
GRAVY (calculated)
-0.297
Length
589 amino acids
Sequence
(BLAST)
001: MALSAAPAGQ APPLGKQLSY QLAAAVRSIN WTYAIFWSMS TGLRPPGVLT WKDGFYNGEV KTRKIISLTT TEVTANDLIL QRSEQLRELY ESLLSGKADH
101: RGRRPAASLS PEDLGEAEWY YTLSMTYSFR PGQGLPGKSF ASNQHVWLYN AQYADTKAFK RALLAKTAPI QTVVCIPFMG GVLELGTSDL VLEDPDMVNA
201: IGTSFWELPF QACLESEAPS SSPSTNEIGN GEVDIVVFED LDHNVAERFI SELGEVESMS DANINCATKE VDDFYDLIEE LDVCALEDNL VMERSFEFMS
301: SLEMAPDMDA LRIDDNTITL SSSVNGSRPS CFTVWKRSSD WEDMDVRDLG ESQKLLKKVV AGGGWTMRAQ ESNIKTHVLS ERRHREKLNE MFLVLKSLVP
401: SINKMDKASI LAETITYLKE LEQRVEELES SRAPSWHPKE ATGRGLHDVA RRKKIKLSTG CKRKAPESER EDDDGPTNVV NVTMMDNEVI LEVQCRWKKL
501: LMTRVFDAIR SLRLDIVSVH TSTPGGLLEL KIRATHQVST SPPPSKVDPI IYVEYIKFIK ASHYSLIYQH CWIVAGCGWF WYCGTWDDH
Best Arabidopsis Sequence Match ( AT1G63650.3 )
(BLAST)
001: MATGENRTVP DNLKKQLAVS VRNIQWSYGI FWSVSASQPG VLEWGDGYYN GDIKTRKTIQ AAEVKIDQLG LERSEQLREL YESLSLAESS ASGSSQVTRR
101: ASAAALSPED LTDTEWYYLV CMSFVFNIGE GIPGGALSNG EPIWLCNAET ADSKVFTRSL LAKSASLQTV VCFPFLGGVL EIGTTEHIKE DMNVIQSVKT
201: LFLEAPPYTT ISTRSDYQEI FDPLSDDKYT PVFITEAFPT TSTSGFEQEP EDHDSFINDG GASQVQSWQF VGEEISNCIH QSLNSSDCVS QTFVGTTGRL
301: ACDPRKSRIQ RLGQIQEQSN HVNMDDDVHY QGVISTIFKT THQLILGPQF QNFDKRSSFT RWKRSSSVKT LGEKSQKMIK KILFEVPLMN KKEELLPDTP
401: EETGNHALSE KKRREKLNER FMTLRSIIPS ISKIDKVSIL DDTIEYLQDL QKRVQELESC RESADTETRI TMMKRKKPDD EEERASANCM NSKRKGSDVN
501: VGEDEPADIG YAGLTDNLRI SSLGNEVVIE LRCAWREGIL LEIMDVISDL NLDSHSVQSS TGDGLLCLTV NCKHKGTKIA TTGMIQEALQ RVAWIC
Arabidopsis Description
BHLH2EGL3 [Source:UniProtKB/TrEMBL;Acc:A0A178W1W8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.