Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU81560 | Sorghum | nucleus | 74.35 | 77.76 |
| OQU82117 | Sorghum | nucleus | 73.54 | 76.78 |
| Zm00001d000236_P001 | Maize | nucleus, plastid | 66.72 | 73.79 |
| TraesCS2D01G406900.1 | Wheat | nucleus | 55.52 | 60.32 |
| TraesCS2A01G409600.2 | Wheat | nucleus, plastid | 52.6 | 58.06 |
| HORVU2Hr1G096810.5 | Barley | nucleus | 52.76 | 57.93 |
| TraesCS2A01G409400.1 | Wheat | nucleus | 52.76 | 57.22 |
| TraesCS2B01G428000.1 | Wheat | nucleus | 52.92 | 56.89 |
| TraesCS2D01G406800.1 | Wheat | plastid | 42.37 | 56.13 |
| Os04t0557200-01 | Rice | cytosol, nucleus, peroxisome | 50.65 | 55.81 |
| TraesCSU01G116000.1 | Wheat | nucleus | 41.07 | 55.48 |
| TraesCSU01G029400.1 | Wheat | nucleus | 50.81 | 54.72 |
| TraesCS4B01G397400.1 | Wheat | nucleus | 50.0 | 54.61 |
| TraesCS4D01G224600.1 | Wheat | nucleus | 48.86 | 54.04 |
| Os04t0557800-00 | Rice | mitochondrion | 50.16 | 53.83 |
| TraesCS5A01G489500.1 | Wheat | nucleus | 49.51 | 53.51 |
| TraesCSU01G237100.1 | Wheat | nucleus | 31.33 | 52.59 |
| TraesCSU01G228400.1 | Wheat | nucleus | 31.33 | 52.59 |
| TraesCS5A01G558500.1 | Wheat | nucleus | 49.51 | 52.14 |
| TraesCS2D01G575600.3 | Wheat | nucleus, plastid | 49.19 | 51.44 |
| Os01t0577300-00 | Rice | cytosol | 10.06 | 50.82 |
| TraesCS4B01G397800.1 | Wheat | nucleus | 40.1 | 48.43 |
| TraesCS4B01G397300.1 | Wheat | nucleus | 31.01 | 46.93 |
| Os01t0576100-00 | Rice | nucleus | 22.24 | 43.63 |
| GSMUA_Achr11P... | Banana | nucleus | 33.28 | 43.52 |
| Os11t0258700-00 | Rice | mitochondrion | 30.84 | 39.34 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 34.74 | 39.19 |
| GSMUA_Achr11P... | Banana | nucleus | 34.74 | 36.09 |
| GSMUA_Achr11P... | Banana | nucleus | 32.31 | 36.05 |
| VIT_02s0025g03450.t01 | Wine grape | nucleus | 35.55 | 34.87 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 32.47 | 34.01 |
| Solyc08g081140.2.1 | Tomato | nucleus | 34.09 | 33.55 |
| VIT_15s0046g02560.t01 | Wine grape | nucleus | 35.23 | 32.93 |
| AT1G63650.1 | Thale cress | nucleus | 31.01 | 32.05 |
| Bra025508.1-P | Field mustard | nucleus | 32.31 | 31.64 |
| Bra027796.1-P | Field mustard | nucleus | 31.01 | 31.52 |
| KRH41187 | Soybean | nucleus | 32.14 | 31.43 |
| Bra027653.1-P | Field mustard | nucleus | 30.36 | 31.38 |
| KRH59908 | Soybean | nucleus | 31.33 | 30.59 |
| AT5G41315.2 | Thale cress | nucleus | 31.66 | 30.23 |
| KRH48144 | Soybean | nucleus | 31.66 | 30.0 |
| KRH65046 | Soybean | nucleus | 31.49 | 29.98 |
| AT4G00480.2 | Thale cress | nucleus | 25.65 | 27.24 |
| CDX77694 | Canola | nucleus | 10.55 | 25.69 |
| PGSC0003DMT400032140 | Potato | nucleus | 14.94 | 25.56 |
| Zm00001d019170_P001 | Maize | nucleus | 27.44 | 25.07 |
| Bra000970.1-P | Field mustard | nucleus | 25.16 | 23.7 |
| Zm00001d043706_P001 | Maize | nucleus | 17.37 | 22.91 |
| Zm00001d031717_P001 | Maize | nucleus | 8.93 | 21.65 |
| Bra037343.1-P | Field mustard | cytosol | 24.03 | 20.82 |
| Zm00001d052728_P001 | Maize | nucleus | 9.25 | 20.73 |
| Zm00001d026009_P001 | Maize | plastid | 6.49 | 19.61 |
| Zm00001d038966_P001 | Maize | plastid | 6.49 | 19.61 |
| Zm00001d006150_P001 | Maize | nucleus | 9.25 | 19.59 |
| Zm00001d021164_P001 | Maize | nucleus | 8.77 | 18.62 |
| Zm00001d033413_P001 | Maize | nucleus | 9.42 | 18.24 |
| Zm00001d047017_P001 | Maize | nucleus | 20.29 | 17.78 |
| Zm00001d028315_P001 | Maize | cytosol | 3.9 | 17.78 |
| Zm00001d009013_P001 | Maize | nucleus | 17.53 | 17.68 |
| Zm00001d039271_P001 | Maize | nucleus | 17.53 | 17.53 |
| Zm00001d030028_P001 | Maize | nucleus | 19.48 | 17.02 |
| Zm00001d028312_P001 | Maize | nucleus | 8.77 | 16.88 |
| Zm00001d003604_P001 | Maize | nucleus | 8.77 | 16.07 |
| Zm00001d033848_P004 | Maize | nucleus | 9.42 | 15.93 |
| Zm00001d030232_P001 | Maize | nucleus | 8.12 | 15.62 |
| Zm00001d013370_P001 | Maize | plastid | 9.25 | 15.28 |
| Zm00001d025462_P001 | Maize | nucleus | 8.12 | 15.15 |
| Zm00001d028314_P001 | Maize | nucleus | 4.55 | 14.97 |
| Zm00001d033412_P001 | Maize | nucleus | 8.28 | 13.82 |
| Zm00001d033407_P001 | Maize | nucleus | 7.95 | 13.76 |
| Zm00001d024781_P001 | Maize | nucleus | 7.79 | 13.6 |
| Zm00001d031167_P002 | Maize | nucleus | 8.12 | 12.72 |
| Zm00001d007536_P001 | Maize | plastid | 10.55 | 10.71 |
Protein Annotations
| EntrezGene:100126972 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1D6JD20 | ProteinID:AQK45724.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 |
| PANTHER:PTHR11514:SF94 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0008427497 | EnsemblPlantsGene:Zm00001d026147 | EnsemblPlants:Zm00001d026147_P002 |
| EnsemblPlants:Zm00001d026147_T002 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
colored1 plant color component at R1
Coordinates
chr10:+:139780968..139790276
Molecular Weight (calculated)
67016.9 Da
IEP (calculated)
4.778
GRAVY (calculated)
-0.357
Length
616 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSASRVQQ AEELLQRPAE RQLMRSQLAA AARSINWSYA LFWSISDTQP GVLTWTDGFY NGEVKTRKIS NSVELTSDHL VMQRSDQLRE LYEALLSGEG
101: DRRAAPARPA GSLSPEDLGD TEWYYVVSMT YAFRPGQGLP GRSFASDEHV WLCNAHLAGS KAFPRALLAK QSASIQSILC IPVMGGVLEL GTTDTVPEAP
201: DLVSRATAAF WEPQCPTYSE EPSSSPSGRA NETGEAAADD GTFAFEELDH NNGMDIEAMT AAGGHGQEEE LRLREAEALS DDASLEHITK EIEEFYSLCD
301: EMDLQALPLP LEDGWTVDAS NFEVPCSSPQ PAPPPVDRAT ANVAADASRA PVYGSRATSF MAWTRSSQQS SCSDDAAPAA VVPAIEEPQR LLKKVVAGGG
401: AWESCGGATG AAQEMSGTGT KNHVMSERKR REKLNEMFLV LKSLLPSIHR VNKASILAET IAYLKELQRR VQELESSREP ASRPSETTTR LITRPSRGNN
501: ESVRKEVCAG SKRKSPELGR DDVERPPVLI MDAGTSNVTV TVSDKDVLLE VQCRWEELLM TRVFDAIKSL HLDVLSVQAS APDGFMGLKI RAQFAGSGAV
601: VPWMISEALR KAIGKR
101: DRRAAPARPA GSLSPEDLGD TEWYYVVSMT YAFRPGQGLP GRSFASDEHV WLCNAHLAGS KAFPRALLAK QSASIQSILC IPVMGGVLEL GTTDTVPEAP
201: DLVSRATAAF WEPQCPTYSE EPSSSPSGRA NETGEAAADD GTFAFEELDH NNGMDIEAMT AAGGHGQEEE LRLREAEALS DDASLEHITK EIEEFYSLCD
301: EMDLQALPLP LEDGWTVDAS NFEVPCSSPQ PAPPPVDRAT ANVAADASRA PVYGSRATSF MAWTRSSQQS SCSDDAAPAA VVPAIEEPQR LLKKVVAGGG
401: AWESCGGATG AAQEMSGTGT KNHVMSERKR REKLNEMFLV LKSLLPSIHR VNKASILAET IAYLKELQRR VQELESSREP ASRPSETTTR LITRPSRGNN
501: ESVRKEVCAG SKRKSPELGR DDVERPPVLI MDAGTSNVTV TVSDKDVLLE VQCRWEELLM TRVFDAIKSL HLDVLSVQAS APDGFMGLKI RAQFAGSGAV
601: VPWMISEALR KAIGKR
001: MATGENRTVP DNLKKQLAVS VRNIQWSYGI FWSVSASQPG VLEWGDGYYN GDIKTRKTIQ AAEVKIDQLG LERSEQLREL YESLSLAESS ASGSSQVTRR
101: ASAAALSPED LTDTEWYYLV CMSFVFNIGE GIPGGALSNG EPIWLCNAET ADSKVFTRSL LAKSASLQTV VCFPFLGGVL EIGTTEHIKE DMNVIQSVKT
201: LFLEAPPYTT ISTRSDYQEI FDPLSDDKYT PVFITEAFPT TSTSGFEQEP EDHDSFINDG GASQVQSWQF VGEEISNCIH QSLNSSDCVS QTFVGTTGRL
301: ACDPRKSRIQ RLGQIQEQSN HVNMDDDVHY QGVISTIFKT THQLILGPQF QNFDKRSSFT RWKRSSSVKT LGEKSQKMIK KILFEVPLMN KKEELLPDTP
401: EETGNHALSE KKRREKLNER FMTLRSIIPS ISKIDKVSIL DDTIEYLQDL QKRVQELESC RESADTETRI TMMKRKKPDD EEERASANCM NSKRKGSDVN
501: VGEDEPADIG YAGLTDNLRI SSLGNEVVIE LRCAWREGIL LEIMDVISDL NLDSHSVQSS TGDGLLCLTV NCKHKGTKIA TTGMIQEALQ RVAWIC
101: ASAAALSPED LTDTEWYYLV CMSFVFNIGE GIPGGALSNG EPIWLCNAET ADSKVFTRSL LAKSASLQTV VCFPFLGGVL EIGTTEHIKE DMNVIQSVKT
201: LFLEAPPYTT ISTRSDYQEI FDPLSDDKYT PVFITEAFPT TSTSGFEQEP EDHDSFINDG GASQVQSWQF VGEEISNCIH QSLNSSDCVS QTFVGTTGRL
301: ACDPRKSRIQ RLGQIQEQSN HVNMDDDVHY QGVISTIFKT THQLILGPQF QNFDKRSSFT RWKRSSSVKT LGEKSQKMIK KILFEVPLMN KKEELLPDTP
401: EETGNHALSE KKRREKLNER FMTLRSIIPS ISKIDKVSIL DDTIEYLQDL QKRVQELESC RESADTETRI TMMKRKKPDD EEERASANCM NSKRKGSDVN
501: VGEDEPADIG YAGLTDNLRI SSLGNEVVIE LRCAWREGIL LEIMDVISDL NLDSHSVQSS TGDGLLCLTV NCKHKGTKIA TTGMIQEALQ RVAWIC
Arabidopsis Description
BHLH2EGL3 [Source:UniProtKB/TrEMBL;Acc:A0A178W1W8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.