Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU92032 | Sorghum | nucleus | 81.25 | 76.47 |
| Os10t0104300-00 | Rice | nucleus | 42.19 | 41.28 |
| Zm00001d028315_P001 | Maize | cytosol | 16.88 | 40.0 |
| Zm00001d028312_P001 | Maize | nucleus | 28.75 | 28.75 |
| Zm00001d038966_P001 | Maize | plastid | 15.94 | 25.0 |
| Zm00001d026009_P001 | Maize | plastid | 15.94 | 25.0 |
| Zm00001d028314_P001 | Maize | nucleus | 13.12 | 22.46 |
| Zm00001d033848_P004 | Maize | nucleus | 25.0 | 21.98 |
| Zm00001d013370_P001 | Maize | plastid | 24.38 | 20.91 |
| Zm00001d033413_P001 | Maize | nucleus | 20.31 | 20.44 |
| Zm00001d033412_P001 | Maize | nucleus | 23.12 | 20.05 |
| Zm00001d031167_P002 | Maize | nucleus | 24.06 | 19.59 |
| Zm00001d033407_P001 | Maize | nucleus | 21.56 | 19.38 |
| Zm00001d003604_P001 | Maize | nucleus | 20.31 | 19.35 |
| Zm00001d024781_P001 | Maize | nucleus | 20.0 | 18.13 |
| Zm00001d025462_P001 | Maize | nucleus | 18.12 | 17.58 |
| Zm00001d031717_P001 | Maize | nucleus | 13.75 | 17.32 |
| Zm00001d052728_P001 | Maize | nucleus | 13.12 | 15.27 |
| Zm00001d006150_P001 | Maize | nucleus | 13.44 | 14.78 |
| Zm00001d021164_P001 | Maize | nucleus | 12.5 | 13.79 |
| Zm00001d043706_P001 | Maize | nucleus | 16.25 | 11.13 |
| Zm00001d000236_P001 | Maize | nucleus, plastid | 15.0 | 8.62 |
| Zm00001d009013_P001 | Maize | nucleus | 16.25 | 8.51 |
| Zm00001d039271_P001 | Maize | nucleus | 15.94 | 8.28 |
| Zm00001d026147_P002 | Maize | nucleus | 15.62 | 8.12 |
| Zm00001d047017_P001 | Maize | nucleus | 17.19 | 7.82 |
| Zm00001d030028_P001 | Maize | nucleus | 17.19 | 7.8 |
| Zm00001d019170_P001 | Maize | nucleus | 15.62 | 7.42 |
| Zm00001d007536_P001 | Maize | plastid | 9.06 | 4.78 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1D6KB41 | InterPro:ACT_dom | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR002912 | InterPro:IPR011598 |
| InterPro:IPR036638 | ProteinID:ONM00606.1 | PFAM:PF00010 | PFscan:PS50888 | PFscan:PS51671 | PANTHER:PTHR11514 |
| PANTHER:PTHR11514:SF35 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000843ABFA | EnsemblPlantsGene:Zm00001d030232 | EnsemblPlants:Zm00001d030232_P001 |
| EnsemblPlants:Zm00001d030232_T001 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
bHLH-transcription factor 111Transcription factor bHLH18
Coordinates
chr1:-:114928784..114930818
Molecular Weight (calculated)
34334.4 Da
IEP (calculated)
6.055
GRAVY (calculated)
-0.403
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSTASHEWL AELEVGELDS IDAMTMEQLA KSLADELWDQ PATTTHHQEQ QQVELSDQRQ QLTKTTGFPF LGDMSRRSYA EADEGFLPTT AAISAGGNDS
101: LFSFTGGKSK QLSFASREPK HESNGGGTTA AGTPMESSKG GRRASSGVHE HIVAERMRRQ KMNHQFAALA SMIPDITKTD KVSLLGSTIE YVQHLRGRLK
201: ALQEERRQSS SSTGSAAESS PPLDARCCVG SPDDGGGVIP TVEADVRGTT VLLRVVCREK KGALITVLKE LEKHGLSVVN TNVLPLAGSS LNITITARIE
301: DGFSTAIELV NALNAALKKN
101: LFSFTGGKSK QLSFASREPK HESNGGGTTA AGTPMESSKG GRRASSGVHE HIVAERMRRQ KMNHQFAALA SMIPDITKTD KVSLLGSTIE YVQHLRGRLK
201: ALQEERRQSS SSTGSAAESS PPLDARCCVG SPDDGGGVIP TVEADVRGTT VLLRVVCREK KGALITVLKE LEKHGLSVVN TNVLPLAGSS LNITITARIE
301: DGFSTAIELV NALNAALKKN
001: MDEDFFLPDF SLVDIDFDFN IYEENNLSPD ESLSNSRRAD QSSKFDHQMH FECLREKPKA AVKPMMKINN KQQLISFDFS SNVISSPAAE EIIMDKLVGR
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
Arabidopsis Description
BHLH19Uncharacterized protein At2g22760 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.