Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99993 | Sorghum | nucleus | 92.64 | 91.0 |
| Zm00001d039271_P001 | Maize | nucleus | 91.49 | 90.75 |
| Os01t0235700-01 | Rice | nucleus | 80.52 | 79.74 |
| Zm00001d007536_P001 | Maize | plastid | 69.23 | 69.69 |
| TraesCS4A01G028900.1 | Wheat | nucleus | 66.28 | 67.84 |
| TraesCS4B01G276900.1 | Wheat | nucleus | 65.96 | 67.39 |
| TraesCS4D01G275500.1 | Wheat | nucleus | 65.79 | 67.22 |
| HORVU3Hr1G057280.2 | Barley | nucleus | 81.18 | 64.67 |
| GSMUA_Achr10P... | Banana | nucleus | 43.54 | 57.95 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 43.37 | 54.75 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 36.99 | 50.11 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 38.3 | 49.26 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 37.15 | 49.03 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 38.63 | 47.48 |
| CDY27319 | Canola | nucleus | 34.04 | 46.95 |
| VIT_15s0046g00320.t01 | Wine grape | nucleus | 45.5 | 46.03 |
| KRH68922 | Soybean | nucleus | 41.41 | 46.0 |
| CDY66312 | Canola | nucleus | 34.04 | 45.41 |
| PGSC0003DMT400000652 | Potato | nucleus | 44.19 | 45.15 |
| Bra039279.1-P | Field mustard | nucleus | 33.88 | 45.1 |
| Zm00001d043706_P001 | Maize | nucleus | 34.37 | 44.97 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 35.84 | 44.6 |
| Solyc01g096050.2.1 | Tomato | nucleus | 43.86 | 44.3 |
| KRH47899 | Soybean | nucleus | 45.34 | 44.25 |
| PGSC0003DMT400018046 | Potato | extracellular, nucleus | 41.73 | 44.12 |
| KRH06456 | Soybean | nucleus | 44.19 | 43.69 |
| Solyc05g050560.1.1 | Tomato | nucleus | 40.75 | 43.01 |
| Bra004532.1-P | Field mustard | nucleus | 34.21 | 43.0 |
| CDX80023 | Canola | nucleus | 34.21 | 42.92 |
| CDY56874 | Canola | nucleus | 34.21 | 42.57 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 39.77 | 42.26 |
| KRG97199 | Soybean | nucleus | 41.73 | 41.2 |
| AT1G01260.1 | Thale cress | nucleus | 38.46 | 39.83 |
| CDX90021 | Canola | nucleus | 35.19 | 39.81 |
| Bra033273.1-P | Field mustard | nucleus | 37.15 | 38.87 |
| AT2G46510.1 | Thale cress | nucleus | 36.01 | 38.87 |
| Zm00001d052728_P001 | Maize | nucleus | 11.95 | 26.55 |
| Zm00001d031717_P001 | Maize | nucleus | 10.97 | 26.38 |
| Zm00001d006150_P001 | Maize | nucleus | 12.44 | 26.12 |
| Zm00001d047017_P001 | Maize | nucleus | 28.64 | 24.89 |
| Zm00001d021164_P001 | Maize | nucleus | 11.78 | 24.83 |
| Zm00001d030028_P001 | Maize | nucleus | 28.48 | 24.68 |
| Zm00001d038966_P001 | Maize | plastid | 6.87 | 20.59 |
| Zm00001d026009_P001 | Maize | plastid | 6.71 | 20.1 |
| Zm00001d028315_P001 | Maize | cytosol | 3.93 | 17.78 |
| Zm00001d033413_P001 | Maize | nucleus | 9.17 | 17.61 |
| Zm00001d025462_P001 | Maize | nucleus | 9.49 | 17.58 |
| Zm00001d026147_P002 | Maize | nucleus | 17.68 | 17.53 |
| Zm00001d003604_P001 | Maize | nucleus | 9.49 | 17.26 |
| Zm00001d013370_P001 | Maize | plastid | 10.47 | 17.16 |
| Zm00001d000236_P001 | Maize | nucleus, plastid | 15.55 | 17.06 |
| Zm00001d033848_P004 | Maize | nucleus | 10.15 | 17.03 |
| Zm00001d028314_P001 | Maize | nucleus | 5.07 | 16.58 |
| Zm00001d030232_P001 | Maize | nucleus | 8.51 | 16.25 |
| Zm00001d028312_P001 | Maize | nucleus | 8.51 | 16.25 |
| Zm00001d033412_P001 | Maize | nucleus | 9.66 | 15.99 |
| Zm00001d033407_P001 | Maize | nucleus | 9.0 | 15.45 |
| Zm00001d019170_P001 | Maize | nucleus | 16.69 | 15.13 |
| Zm00001d031167_P002 | Maize | nucleus | 9.33 | 14.5 |
| Zm00001d024781_P001 | Maize | nucleus | 7.69 | 13.31 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | ProteinID:AQK91196.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:K7VBN7 | InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF47 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000220AE9B | EnsemblPlantsGene:Zm00001d009013 |
| EnsemblPlants:Zm00001d009013_P001 | EnsemblPlants:Zm00001d009013_T001 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
bHLH-transcription factor 99Putative HLH DNA-binding domain superfamily protein
Coordinates
chr8:-:30167000..30168835
Molecular Weight (calculated)
66410.6 Da
IEP (calculated)
7.312
GRAVY (calculated)
-0.466
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMKMEHEDN GAIGGTDGTW TEDDRALGAA VLGADAFAYL TKGGGAISEG LVATSLPGDL QNKLQELVES ESPGTSWNYA IFWQLSRTKS GDLVLGWGDG
101: CCREPRDGEL GAAASAGSED SKQRMRKRAL QRLHIAFGVA DEEDYSPGID QVTDTEMFFL ASMYFAFPRH AGGPGQAFAA GIPIWVPNSE RKVVPANYCY
201: RGFLANAAGF RTIVLVPFES GVLELGSTQH IAESSGTVQT VRSVFAGTSG NKSAVQRHEA ERSPGLAKIF GKDLNLGRPS VGLAVGVSNS KVDERTWEQR
301: SAVGGTSLLP SVQKGLQNFS WSQARGLNSH QQKFGNGVLI VSNNEGAHRN NGAVDSPSAA QFQLQKAPQL QKLSVVQKTP QLVNQQPMQA QVPRQIDFSA
401: GSSSKPGVLV TRAGVLDGES AEVDGLCKEE GPPPVMEDRR PRKRGRKPAN GREEPLNHVE AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAITYIT
501: DLQKKLKEME TERERLLESG MVDPRERAPR PEVDIQVVQD EVLVRVMSPM ENHPVKKVFQ AFEEAEVRVG ESKVTSNNNG TAVHSFIIKC PGTEQQTREK
601: VIAAMSRAMS S
101: CCREPRDGEL GAAASAGSED SKQRMRKRAL QRLHIAFGVA DEEDYSPGID QVTDTEMFFL ASMYFAFPRH AGGPGQAFAA GIPIWVPNSE RKVVPANYCY
201: RGFLANAAGF RTIVLVPFES GVLELGSTQH IAESSGTVQT VRSVFAGTSG NKSAVQRHEA ERSPGLAKIF GKDLNLGRPS VGLAVGVSNS KVDERTWEQR
301: SAVGGTSLLP SVQKGLQNFS WSQARGLNSH QQKFGNGVLI VSNNEGAHRN NGAVDSPSAA QFQLQKAPQL QKLSVVQKTP QLVNQQPMQA QVPRQIDFSA
401: GSSSKPGVLV TRAGVLDGES AEVDGLCKEE GPPPVMEDRR PRKRGRKPAN GREEPLNHVE AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAITYIT
501: DLQKKLKEME TERERLLESG MVDPRERAPR PEVDIQVVQD EVLVRVMSPM ENHPVKKVFQ AFEEAEVRVG ESKVTSNNNG TAVHSFIIKC PGTEQQTREK
601: VIAAMSRAMS S
001: MNIGRLVWNE DDKAIVASLL GKRALDYLLS NSVSNANLLM TLGSDENLQN KLSDLVERPN ASNFSWNYAI FWQISRSKAG DLVLCWGDGY CREPKEGEKS
101: EIVRILSMGR EEETHQTMRK RVLQKLHDLF GGSEEENCAL GLDRVTDTEM FLLSSMYFSF PRGEGGPGKC FASAKPVWLS DVVNSGSDYC VRSFLAKSAG
201: IQTVVLVPTD LGVVELGSTS CLPESEDSIL SIRSLFTSSL PPVRAVALPV TVAEKIDDNR TKIFGKDLHN SGFLQHHQHH QQQQQQPPQQ QQHRQFREKL
301: TVRKMDDRAP KRLDAYPNNG NRFMFSNPGT NNNTLLSPTW VQPENYTRPI NVKEVPSTDE FKFLPLQQSS QRLLPPAQMQ IDFSAASSRA SENNSDGEGG
401: GEWADAVGAD ESGNNRPRKR GRRPANGRAE ALNHVEAERQ RREKLNQRFY ALRSVVPNIS KMDKASLLGD AVSYINELHA KLKVMEAERE RLGYSSNPPI
501: SLDSDINVQT SGEDVTVRIN CPLESHPASR IFHAFEESKV EVINSNLEVS QDTVLHTFVV KSEELTKEKL ISALSREQTN SVQSRTSSGR
101: EIVRILSMGR EEETHQTMRK RVLQKLHDLF GGSEEENCAL GLDRVTDTEM FLLSSMYFSF PRGEGGPGKC FASAKPVWLS DVVNSGSDYC VRSFLAKSAG
201: IQTVVLVPTD LGVVELGSTS CLPESEDSIL SIRSLFTSSL PPVRAVALPV TVAEKIDDNR TKIFGKDLHN SGFLQHHQHH QQQQQQPPQQ QQHRQFREKL
301: TVRKMDDRAP KRLDAYPNNG NRFMFSNPGT NNNTLLSPTW VQPENYTRPI NVKEVPSTDE FKFLPLQQSS QRLLPPAQMQ IDFSAASSRA SENNSDGEGG
401: GEWADAVGAD ESGNNRPRKR GRRPANGRAE ALNHVEAERQ RREKLNQRFY ALRSVVPNIS KMDKASLLGD AVSYINELHA KLKVMEAERE RLGYSSNPPI
501: SLDSDINVQT SGEDVTVRIN CPLESHPASR IFHAFEESKV EVINSNLEVS QDTVLHTFVV KSEELTKEKL ISALSREQTN SVQSRTSSGR
Arabidopsis Description
BHLH13Transcription factor bHLH13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.