Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER93684 | Sorghum | nucleus | 84.27 | 77.92 |
| Zm00001d026009_P001 | Maize | plastid | 31.74 | 55.39 |
| Zm00001d038966_P001 | Maize | plastid | 31.74 | 55.39 |
| TraesCS4A01G292700.1 | Wheat | nucleus | 48.88 | 48.47 |
| TraesCS5D01G517900.1 | Wheat | nucleus | 44.1 | 48.46 |
| Zm00001d003604_P001 | Maize | nucleus | 45.51 | 48.21 |
| TraesCS4A01G354100.1 | Wheat | nucleus | 43.82 | 48.0 |
| Zm00001d033413_P001 | Maize | nucleus | 42.7 | 47.8 |
| TraesCS4D01G018800.2 | Wheat | nucleus | 48.6 | 47.79 |
| TraesCS5B01G518400.1 | Wheat | nucleus | 43.54 | 47.69 |
| TraesCS4B01G020700.1 | Wheat | nucleus | 48.31 | 47.12 |
| TraesCSU01G075200.1 | Wheat | nucleus | 42.7 | 46.91 |
| TraesCS4D01G019100.1 | Wheat | nucleus | 47.75 | 46.7 |
| Os03t0671800-01 | Rice | nucleus | 50.0 | 46.23 |
| TraesCS5B01G518500.1 | Wheat | nucleus | 41.29 | 45.23 |
| HORVU0Hr1G014300.1 | Barley | nucleus | 41.57 | 44.85 |
| TraesCS5B01G518800.1 | Wheat | nucleus | 39.61 | 44.76 |
| Zm00001d025462_P001 | Maize | nucleus | 40.45 | 43.64 |
| Zm00001d033412_P001 | Maize | nucleus | 44.94 | 43.36 |
| HORVU4Hr1G003340.3 | Barley | nucleus | 49.16 | 37.8 |
| Zm00001d024781_P001 | Maize | nucleus | 36.8 | 37.11 |
| Zm00001d031167_P002 | Maize | nucleus | 38.2 | 34.61 |
| TraesCSU01G075100.1 | Wheat | nucleus | 31.74 | 33.43 |
| Zm00001d033848_P004 | Maize | nucleus | 32.58 | 31.87 |
| Zm00001d013370_P001 | Maize | plastid | 30.06 | 28.69 |
| Zm00001d028315_P001 | Maize | cytosol | 10.67 | 28.15 |
| Zm00001d028312_P001 | Maize | nucleus | 21.07 | 23.44 |
| Zm00001d030232_P001 | Maize | nucleus | 19.38 | 21.56 |
| Zm00001d028314_P001 | Maize | nucleus | 9.83 | 18.72 |
| Zm00001d052728_P001 | Maize | nucleus | 13.2 | 17.09 |
| Zm00001d031717_P001 | Maize | nucleus | 12.08 | 16.93 |
| Zm00001d006150_P001 | Maize | nucleus | 12.36 | 15.12 |
| Zm00001d021164_P001 | Maize | nucleus | 11.8 | 14.48 |
| Zm00001d043706_P001 | Maize | nucleus | 14.33 | 10.92 |
| Zm00001d009013_P001 | Maize | nucleus | 15.45 | 9.0 |
| Zm00001d039271_P001 | Maize | nucleus | 15.45 | 8.93 |
| Zm00001d047017_P001 | Maize | nucleus | 17.42 | 8.82 |
| Zm00001d000236_P001 | Maize | nucleus, plastid | 13.48 | 8.62 |
| Zm00001d030028_P001 | Maize | nucleus | 16.57 | 8.37 |
| Zm00001d026147_P002 | Maize | nucleus | 13.76 | 7.95 |
| Zm00001d019170_P001 | Maize | nucleus | 11.8 | 6.23 |
| Zm00001d007536_P001 | Maize | plastid | 8.71 | 5.11 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | UniProt:A0A1D6KYV3 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| ProteinID:ONM07563.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF74 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000842D150 | EnsemblPlantsGene:Zm00001d033407 | EnsemblPlants:Zm00001d033407_P001 | EnsemblPlants:Zm00001d033407_T001 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
bHLH-transcription factor 114Transcription factor bHLH28
Coordinates
chr1:-:262150222..262152715
Molecular Weight (calculated)
37290.9 Da
IEP (calculated)
7.053
GRAVY (calculated)
-0.304
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSSQFMQW ALSTLQHDEL PPATPPAAIA YDDNDCNTFS SVPALGYSAA SVNSMVPAEP PAQEGHRATA ATNSWSSADT ASVTAAQRDA WSPSSQQNSV
101: NCATPRSSGS SQPVSWDFHS ASASASAQLI IKEAQVNSAT AARAESAAGG MPVPQPQMVQ NGSPPTRRAS AKMSSASSSA PPCSQDHIVA ERKRREKINQ
201: RFIELSAVIP CLKKMDKATI LSDATRYVKE LQEKLKALQQ GGSCNARGGT ESAPVLVKKP RIAAPGDDDK DRGGAPSPSC APPGAAATTG NALPEIEARI
301: SDGNVVMLRI HCEDGKGVLV RLLAEVEGLR LSITHTNVMP FSACILIINI MAKASC
101: NCATPRSSGS SQPVSWDFHS ASASASAQLI IKEAQVNSAT AARAESAAGG MPVPQPQMVQ NGSPPTRRAS AKMSSASSSA PPCSQDHIVA ERKRREKINQ
201: RFIELSAVIP CLKKMDKATI LSDATRYVKE LQEKLKALQQ GGSCNARGGT ESAPVLVKKP RIAAPGDDDK DRGGAPSPSC APPGAAATTG NALPEIEARI
301: SDGNVVMLRI HCEDGKGVLV RLLAEVEGLR LSITHTNVMP FSACILIINI MAKASC
001: MATAMNVFST KWSSELDIEE YSIIHQFHMN SLVGDVPQSL SSLDDTTTCY NLDASCNKSL VEERPSKILK TTHISPNLHP FSSSNPPPPK HQPSSRILSF
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQN NNFDMKIEDV VKNLSFGLSK LT
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQN NNFDMKIEDV VKNLSFGLSK LT
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G22750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.