Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G518800.1 | Wheat | nucleus | 70.12 | 75.24 |
| HORVU0Hr1G014300.1 | Barley | nucleus | 52.66 | 53.94 |
| TraesCSU01G075200.1 | Wheat | nucleus | 50.59 | 52.78 |
| Zm00001d033407_P001 | Maize | nucleus | 33.43 | 31.74 |
| EER93684 | Sorghum | nucleus | 35.8 | 31.43 |
| Os03t0671800-01 | Rice | nucleus | 35.21 | 30.91 |
| TraesCSU01G222600.1 | Wheat | nucleus | 9.17 | 12.6 |
| TraesCSU01G228400.1 | Wheat | nucleus | 9.76 | 8.99 |
| TraesCSU01G237100.1 | Wheat | nucleus | 9.76 | 8.99 |
| TraesCSU01G029400.1 | Wheat | nucleus | 13.31 | 7.87 |
| TraesCSU01G116000.1 | Wheat | nucleus | 10.36 | 7.68 |
Protein Annotations
| EnsemblPlants:TraesCSU01G075100.1 | EnsemblPlantsGene:TraesCSU01G075100 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR23042 |
| PANTHER:PTHR23042:SF74 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| TIGR:cd00083 | MapMan:15.5.32 | MapMan:25.4.1.7 | : | : | : |
Description
No Description!
Coordinates
chrUn:+:67332381..67334601
Molecular Weight (calculated)
36749.2 Da
IEP (calculated)
9.988
GRAVY (calculated)
-0.746
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MDESSIFLQW AMEALGQGQY AAVAGDAFSS SPFLEPHHSA ALQSGTDMAA HRYGATDDSR SSGNSGAALA KENNGWSSNC STNYPAVSPN FTSGSVAAPS
101: HGVPEPAHRS PPSRKSSPSN NGTASTGQKH VMAERKRREK LNRHFIELST VIPGLKKMDK TTILSDAVRY VKEQHEKLKA LQDRDDRTIE SVVLVKRPCI
201: SNVDDGRPSP PPSAVAQTSP TPAIKTSLPE IDARILERNV MGEDPLRGRQ GGPCHVARRG RGAPSYHHTR QCHVLPGLHS HHKSHGKGGR RLQHHSGGHC
301: VQARPCIETV SPYRQNNNIK DQMKIKMLIK NEEVANVT
101: HGVPEPAHRS PPSRKSSPSN NGTASTGQKH VMAERKRREK LNRHFIELST VIPGLKKMDK TTILSDAVRY VKEQHEKLKA LQDRDDRTIE SVVLVKRPCI
201: SNVDDGRPSP PPSAVAQTSP TPAIKTSLPE IDARILERNV MGEDPLRGRQ GGPCHVARRG RGAPSYHHTR QCHVLPGLHS HHKSHGKGGR RLQHHSGGHC
301: VQARPCIETV SPYRQNNNIK DQMKIKMLIK NEEVANVT
001: MDEDFFLPDF SLVDIDFDFN IYEENNLSPD ESLSNSRRAD QSSKFDHQMH FECLREKPKA AVKPMMKINN KQQLISFDFS SNVISSPAAE EIIMDKLVGR
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQVIINNYI YMQY
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQVIINNYI YMQY
Arabidopsis Description
BHLH19Uncharacterized protein At2g22760 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.