Factsheet for HORVU0Hr1G014300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytoskeleton, nucleus
MultiLoc:	nucleus
WoLF PSORT:	cytoskeleton
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G518400.1	Wheat	nucleus	83.64	84.92
TraesCS5D01G517900.1	Wheat	nucleus	83.33	84.88
TraesCS4A01G354100.1	Wheat	nucleus	80.91	82.15
TraesCSU01G075200.1	Wheat	nucleus	80.0	81.48
TraesCS5B01G518500.1	Wheat	nucleus	72.73	73.85
TraesCS5B01G518800.1	Wheat	nucleus	69.09	72.38
TraesCSU01G075100.1	Wheat	nucleus	53.94	52.66
Os03t0671800-01	Rice	nucleus	50.0	42.86
Zm00001d033407_P001	Maize	nucleus	44.85	41.57
HORVU3Hr1G002620.1	Barley	plastid	28.79	41.3
EER93684	Sorghum	nucleus	47.88	41.04
HORVU4Hr1G003210.1	Barley	nucleus	44.55	40.27
HORVU4Hr1G003340.3	Barley	nucleus	53.64	38.23
HORVU4Hr1G078880.2	Barley	nucleus	39.39	35.62
HORVU4Hr1G078910.2	Barley	nucleus	39.7	35.31
HORVU5Hr1G002090.11	Barley	nucleus	40.3	34.82
HORVU4Hr1G009440.2	Barley	nucleus	28.48	27.57
HORVU7Hr1G120420.2	Barley	nucleus	30.61	26.17
HORVU0Hr1G025420.1	Barley	cytosol, nucleus	9.09	18.29
HORVU5Hr1G080080.1	Barley	nucleus, plastid	11.21	17.62
HORVU5Hr1G080040.1	Barley	nucleus	13.33	16.42
HORVU5Hr1G079900.1	Barley	cytosol	12.12	14.81
HORVU4Hr1G065640.6	Barley	nucleus	12.42	12.02
HORVU3Hr1G066390.1	Barley	nucleus	14.55	10.32
HORVU1Hr1G020370.2	Barley	extracellular, nucleus	15.76	10.22
HORVU2Hr1G096810.5	Barley	nucleus	16.06	9.45
HORVU1Hr1G050560.1	Barley	nucleus	18.48	8.92
HORVU3Hr1G057280.2	Barley	nucleus	16.67	7.17

Protein Annotations

EnsemblPlants:HORVU0Hr1G014300.1	EnsemblPlantsGene:HORVU0Hr1G014300	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	ncoils:Coil
PANTHER:PTHR23042	PANTHER:PTHR23042:SF74	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000B48008E	UniProt:A0A287E1I2	MapMan:15.5.32	MapMan:25.4.1.7	:

Description

No Description!

Coordinates

chrchrUn:-:79045867..79048094

Molecular Weight (calculated)

35681.1 Da

IEP (calculated)

5.805

GRAVY (calculated)

-0.298

Length

330 amino acids

Sequence
(BLAST)

001: MDDSSMFIQW AMETLEQEKD AAGAGDVFPS SLLELDSSRL ELSHSAGLQN GMDMAAHRYG ATDSWSSGDS GAAVVVENDG WSSNCSTNYP AASWNFTSAI
101: PQPASIIKTT PSPSAAPSHV VPELEHRSPP SRKSSGASRG TVPTVQEHVM AERKRREKIN RRFIELSTVI PGPTQMDKAT ILSDAVRYVK EQQEKLKAFE
201: DRDVRSIDSV VLVKRPCISG VDDGCPSPPS GATRGGLQTA RISLPEIEAT LSEINVMVRI HCEDGKGVLV TLLAEVEGLH LTITHTNVVS FPASTLIVNL
301: IAKLDEGFTV TADDIIRKLD SALRRHHNGK

Best Arabidopsis Sequence Match ( AT4G37850.1 )
(BLAST)

001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI

Arabidopsis Description

BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.