Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G306200.1 | Wheat | nucleus | 78.89 | 76.34 |
| TraesCS5D01G313600.1 | Wheat | nucleus | 78.15 | 75.63 |
| TraesCS5B01G307000.1 | Wheat | nucleus | 78.15 | 75.63 |
| TraesCS5A01G306500.1 | Wheat | nucleus | 77.78 | 74.73 |
| TraesCS5D01G313500.1 | Wheat | nucleus | 77.04 | 74.55 |
| TraesCS5B01G306800.1 | Wheat | nucleus | 77.04 | 74.29 |
| HORVU5Hr1G080040.1 | Barley | nucleus | 56.67 | 57.09 |
| HORVU5Hr1G080080.1 | Barley | nucleus, plastid | 43.7 | 56.19 |
| Zm00001d006150_P001 | Maize | nucleus | 57.41 | 53.26 |
| HORVU0Hr1G025420.1 | Barley | cytosol, nucleus | 30.74 | 50.61 |
| EER99201 | Sorghum | nucleus | 55.19 | 50.34 |
| Zm00001d021164_P001 | Maize | nucleus | 52.96 | 49.31 |
| Bra017527.1-P | Field mustard | nucleus | 27.04 | 32.3 |
| Bra013263.1-P | Field mustard | nucleus | 27.41 | 27.31 |
| VIT_02s0025g02610.t01 | Wine grape | nucleus | 31.85 | 23.82 |
| Bra024992.1-P | Field mustard | nucleus | 22.96 | 22.88 |
| CDY70013 | Canola | nucleus | 21.11 | 22.62 |
| KRH47834 | Soybean | nucleus | 33.7 | 19.61 |
| PGSC0003DMT400028057 | Potato | nucleus | 28.15 | 19.54 |
| PGSC0003DMT400014089 | Potato | nucleus | 27.78 | 19.53 |
| KRH06400 | Soybean | nucleus | 33.7 | 19.53 |
| Solyc10g009290.1.1 | Tomato | nucleus | 32.59 | 19.51 |
| AT4G00870.1 | Thale cress | nucleus, plastid | 29.63 | 18.91 |
| Solyc08g083170.1.1 | Tomato | extracellular | 26.67 | 18.6 |
| PGSC0003DMT400014097 | Potato | nucleus | 31.48 | 18.6 |
| Solyc10g009270.2.1 | Tomato | nucleus | 27.04 | 18.58 |
| VIT_15s0048g02820.t01 | Wine grape | nucleus | 34.07 | 18.51 |
| PGSC0003DMT400047220 | Potato | nucleus | 30.74 | 18.36 |
| Solyc01g096370.2.1 | Tomato | nucleus | 30.37 | 18.22 |
| PGSC0003DMT400031899 | Potato | plastid | 28.89 | 18.1 |
| HORVU3Hr1G002620.1 | Barley | plastid | 15.19 | 17.83 |
| Bra010178.1-P | Field mustard | nucleus | 32.22 | 14.5 |
| AT5G46830.1 | Thale cress | nucleus | 27.41 | 14.48 |
| PGSC0003DMT400015017 | Potato | nucleus | 24.44 | 14.47 |
| Bra017520.1-P | Field mustard | nucleus | 26.67 | 14.46 |
| HORVU3Hr1G066390.1 | Barley | nucleus | 24.81 | 14.41 |
| Solyc08g008600.2.1 | Tomato | nucleus | 24.07 | 14.38 |
| Bra024998.1-P | Field mustard | nucleus | 30.37 | 14.14 |
| PGSC0003DMT400002963 | Potato | nucleus | 31.11 | 14.05 |
| HORVU4Hr1G003210.1 | Barley | nucleus | 18.89 | 13.97 |
| AT1G32640.1 | Thale cress | nucleus | 32.22 | 13.96 |
| Bra017523.1-P | Field mustard | nucleus | 25.93 | 13.81 |
| AT5G46760.1 | Thale cress | nucleus | 30.0 | 13.68 |
| AT4G17880.1 | Thale cress | nucleus | 29.26 | 13.41 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 31.85 | 12.97 |
| HORVU4Hr1G009440.2 | Barley | nucleus | 16.3 | 12.9 |
| Solyc08g005050.2.1 | Tomato | nucleus | 21.85 | 12.72 |
| Solyc08g076930.1.1 | Tomato | nucleus | 31.85 | 12.48 |
| PGSC0003DMT400045204 | Potato | nucleus | 31.85 | 12.39 |
| KRH75613 | Soybean | nucleus | 28.89 | 12.24 |
| KRH74418 | Soybean | nucleus | 28.89 | 12.15 |
| HORVU0Hr1G014300.1 | Barley | nucleus | 14.81 | 12.12 |
| HORVU1Hr1G050560.1 | Barley | nucleus | 30.37 | 11.99 |
| KRH45440 | Soybean | nucleus | 28.89 | 11.93 |
| HORVU4Hr1G078880.2 | Barley | nucleus | 15.93 | 11.78 |
| HORVU4Hr1G078910.2 | Barley | nucleus | 15.93 | 11.59 |
| HORVU5Hr1G002090.11 | Barley | nucleus | 15.93 | 11.26 |
| Bra024993.1-P | Field mustard | nucleus | 15.56 | 11.14 |
| KRH39540 | Soybean | nucleus | 29.26 | 10.81 |
| HORVU1Hr1G020370.2 | Barley | extracellular, nucleus | 18.89 | 10.02 |
| HORVU4Hr1G003340.3 | Barley | nucleus | 17.04 | 9.94 |
| HORVU4Hr1G065640.6 | Barley | nucleus | 10.74 | 8.5 |
| HORVU2Hr1G096810.5 | Barley | nucleus | 17.41 | 8.38 |
| HORVU3Hr1G057280.2 | Barley | nucleus | 23.33 | 8.21 |
| HORVU7Hr1G120420.2 | Barley | nucleus | 11.48 | 8.03 |
| Bra013264.1-P | Field mustard | nucleus | 3.7 | 3.37 |
| CDY70012 | Canola | nucleus | 2.96 | 3.0 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G079900.1 | EnsemblPlantsGene:HORVU5Hr1G079900 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF68 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | MapMan:15.5.32 | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:558346798..558349735
Molecular Weight (calculated)
24351.7 Da
IEP (calculated)
8.788
GRAVY (calculated)
-0.304
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MANXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXVPA KSEDTGDLWP AGTLLSPDSE LSELPATSLP ASTESTPRPA AKRRGRKPGP RPEGPTVSHV
101: EAERQRRDKL TRRFCDLRAA VPTVSRMDKA SLLADAAAYI AELRARVARL EDESKQAAAA RWDTSSASHG GGASFHNFLA GDETVDVRMV GRDGAALRVT
201: TAAGSATHAP ARLMSALRSL ELHVQHACVS RVQGATVQDA VVDVPAALQH DDGAALRSAL LQRLXXXXXX
101: EAERQRRDKL TRRFCDLRAA VPTVSRMDKA SLLADAAAYI AELRARVARL EDESKQAAAA RWDTSSASHG GGASFHNFLA GDETVDVRMV GRDGAALRVT
201: TAAGSATHAP ARLMSALRSL ELHVQHACVS RVQGATVQDA VVDVPAALQH DDGAALRSAL LQRLXXXXXX
001: MYNLTFSPSL SSSLLSFTQQ TPAAIVSSSP PDLVLQQKLR FVVETSPDRW AYVIFWQKMF DDQSDRSYLV WVDGHFCGNK NNNSQENYTT NSIECELMMD
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
Arabidopsis Description
BHLH14Transcription factor bHLH14 [Source:UniProtKB/Swiss-Prot;Acc:O23090]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.