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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 2
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g009290.1.1 Tomato nucleus 87.09 88.25
PGSC0003DMT400014089 Potato nucleus 49.23 58.59
PGSC0003DMT400028057 Potato nucleus 49.67 58.35
PGSC0003DMT400047220 Potato nucleus 53.61 54.2
PGSC0003DMT400028054 Potato cytosol 22.98 53.3
PGSC0003DMT400028052 Potato nucleus 23.19 52.22
KRH06400 Soybean nucleus 51.2 50.21
KRH47834 Soybean nucleus 50.33 49.57
PGSC0003DMT400031899 Potato plastid 38.95 41.3
PGSC0003DMT400015017 Potato nucleus 39.39 39.47
TraesCS5B01G306600.1 Wheat nucleus 21.88 36.63
TraesCS5D01G313400.1 Wheat nucleus 21.44 35.9
TraesCS1A01G369200.1 Wheat nucleus 15.54 35.86
TraesCS5A01G306600.1 Wheat nucleus 21.44 35.64
TraesCS2A01G448500.1 Wheat nucleus 19.91 35.55
TraesCS5D01G313600.1 Wheat nucleus 21.66 35.48
TraesCS5B01G307000.1 Wheat nucleus 21.44 35.13
TraesCS5A01G306200.1 Wheat nucleus 21.44 35.13
TraesCS5A01G306700.1 Wheat peroxisome 21.01 35.04
Os08t0543700-00 Rice nucleus, peroxisome, plastid 20.13 34.98
TraesCS2B01G469200.1 Wheat nucleus 18.82 34.96
TraesCSU01G222600.1 Wheat nucleus 18.82 34.96
TraesCS5A01G306500.1 Wheat nucleus 21.44 34.88
TraesCS5D01G313500.1 Wheat nucleus 21.23 34.77
Zm00001d031717_P001 Maize nucleus 19.26 34.65
TraesCS5D01G313700.1 Wheat nucleus 20.79 34.55
TraesCS2B01G469300.1 Wheat nucleus 19.26 34.38
TraesCS1D01G374800.1 Wheat nucleus 19.91 34.34
OQU80776 Sorghum nucleus 19.69 34.22
OQU75588 Sorghum nucleus 19.69 34.22
HORVU0Hr1G025420.1 Barley cytosol, nucleus 12.25 34.15
Os09t0519100-00 Rice nucleus 19.69 34.09
TraesCS5B01G307100.1 Wheat nucleus 20.35 34.07
TraesCS7D01G102200.1 Wheat nucleus 19.04 33.98
HORVU5Hr1G080040.1 Barley nucleus 19.91 33.96
TraesCS5B01G306800.1 Wheat nucleus 20.57 33.57
Zm00001d006150_P001 Maize nucleus 21.23 33.33
EER97058 Sorghum cytosol, nucleus, plastid 20.13 33.33
EER99201 Sorghum nucleus 21.44 33.11
Zm00001d052728_P001 Maize nucleus 19.91 33.09
Zm00001d021164_P001 Maize nucleus 20.79 32.76
KXG25462 Sorghum nucleus 19.91 32.73
OQU80777 Sorghum nucleus 19.91 32.5
TraesCS5A01G306400.1 Wheat nucleus 15.75 32.29
HORVU5Hr1G080080.1 Barley nucleus, plastid 14.66 31.9
TraesCS1B01G387900.1 Wheat nucleus 16.63 31.8
HORVU5Hr1G079900.1 Barley cytosol 18.6 31.48
OQU80778 Sorghum nucleus 18.6 31.48
OQU86344 Sorghum nucleus 17.29 30.86
PGSC0003DMT400002963 Potato nucleus 40.26 30.77
OQU80775 Sorghum cytosol, nucleus, peroxisome, plastid 18.38 30.11
PGSC0003DMT400045204 Potato nucleus 40.7 26.8
HORVU1Hr1G050560.1 Barley nucleus 38.29 25.58
TraesCS1B01G208000.1 Wheat nucleus 38.29 25.25
TraesCS1D01G196900.1 Wheat nucleus 38.29 25.18
PGSC0003DMT400051672 Potato nucleus 26.04 24.95
TraesCS1A01G193200.1 Wheat nucleus 37.64 24.82
Os10t0575000-01 Rice nucleus 37.86 24.75
Zm00001d030028_P001 Maize nucleus 37.42 24.26
PGSC0003DMT400000652 Potato nucleus 31.73 24.25
KXG39194 Sorghum nucleus 37.42 24.19
Zm00001d047017_P001 Maize nucleus 36.76 23.9
PGSC0003DMT400018046 Potato extracellular, nucleus 29.54 23.36
PGSC0003DMT400033757 Potato nucleus 10.72 23.33
PGSC0003DMT400013074 Potato nucleus 14.44 18.7
PGSC0003DMT400033569 Potato nucleus 22.76 17.63
PGSC0003DMT400078698 Potato nucleus 7.88 17.22
PGSC0003DMT400078699 Potato nucleus 11.38 16.1
PGSC0003DMT400078696 Potato nucleus 11.6 15.27
PGSC0003DMT400032140 Potato nucleus 11.38 14.44
Protein Annotations
EntrezGene:102597494MapMan:15.5.32Gene3D:4.10.280.10ncoils:CoilGO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638UniProt:M1A3Q9
InterPro:MYC/MYB_NPFAM:PF00010PFAM:PF14215EnsemblPlantsGene:PGSC0003DMG400005528PGSC:PGSC0003DMG400005528EnsemblPlants:PGSC0003DMT400014097
PFscan:PS50888PANTHER:PTHR11514PANTHER:PTHR11514:SF40SMART:SM00353SUPFAM:SSF47459UniParc:UPI0002961919
RefSeq:XP_006362125.1InterPro:bHLH_domSEG:seg:::
Description
DNA binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005528]
Coordinates
chr10:-:5054700..5056343
Molecular Weight (calculated)
50901.0 Da
IEP (calculated)
6.399
GRAVY (calculated)
-0.472
Length
457 amino acids
Sequence
(BLAST)
001: MDELIVSSSS FFIPSLLSQG TQTSSNLQQK LQNILKIQTD SWSYAIFWQT SNDDDDGHLF LAWGDGHFHG TKSKTGVQAS QQSTERKNVI KGIQALICEN
101: GEEKVDDAGE VTDAEWFYVM SLAQSFSIGD GVPGKAFSTG SIIWLTGAQQ LQFHNCERAK EAHVHGIQTF VCIPTSNGVL ELGSNQQIKE NWILIQQVKS
201: IFSSIPDLGL VTCLEQNTTI NNNSKNPKTE ETETETSDSD CQVLVEKPVE KKTPKKRGRK PGATRETPLN HVEAERQRRE KLNHRFYALR SVVPHVTKMD
301: KASLLSDAVS YINELKSKVT ELEGQLTRKS KKLKIECTDS ITIDNHSTAT TTTTNSVDQI RHNSSSAASF GVQNNLKVEV EVKILGPDAM VRVQSENVNY
401: PSARLMRALQ DLELHVHHAS ISSVNDIMLQ DIVVKVPIEL STEDRLKNAL IRSIEQQ
Best Arabidopsis Sequence Match ( AT4G00870.1 )
(BLAST)
001: MYNLTFSPSL SSSLLSFTQQ TPAAIVSSSP PDLVLQQKLR FVVETSPDRW AYVIFWQKMF DDQSDRSYLV WVDGHFCGNK NNNSQENYTT NSIECELMMD
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
Arabidopsis Description
BHLH14Transcription factor bHLH14 [Source:UniProtKB/Swiss-Prot;Acc:O23090]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.