Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030028_P001 | Maize | nucleus | 94.77 | 95.04 |
| Zm00001d047017_P001 | Maize | nucleus | 89.25 | 89.76 |
| HORVU1Hr1G050560.1 | Barley | nucleus | 80.62 | 83.33 |
| TraesCS1B01G208000.1 | Wheat | nucleus | 81.33 | 82.97 |
| Os10t0575000-01 | Rice | nucleus | 81.75 | 82.69 |
| TraesCS1D01G196900.1 | Wheat | nucleus | 81.19 | 82.59 |
| TraesCS1A01G193200.1 | Wheat | nucleus | 77.23 | 78.79 |
| Bra017527.1-P | Field mustard | nucleus | 19.09 | 59.73 |
| GSMUA_Achr7P04720_001 | Banana | nucleus | 38.19 | 57.57 |
| GSMUA_Achr3P00370_001 | Banana | plastid | 35.5 | 57.05 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 52.05 | 55.51 |
| Bra013263.1-P | Field mustard | nucleus | 20.65 | 53.87 |
| Solyc08g005050.2.1 | Tomato | nucleus | 34.94 | 53.23 |
| KRH75613 | Soybean | nucleus | 47.52 | 52.75 |
| Bra010178.1-P | Field mustard | nucleus | 43.85 | 51.67 |
| PGSC0003DMT400002963 | Potato | nucleus | 43.56 | 51.51 |
| KRH74418 | Soybean | nucleus | 46.68 | 51.4 |
| KRH45440 | Soybean | nucleus | 47.24 | 51.07 |
| Solyc08g076930.1.1 | Tomato | nucleus | 49.08 | 50.36 |
| AT1G32640.1 | Thale cress | nucleus | 44.13 | 50.08 |
| PGSC0003DMT400045204 | Potato | nucleus | 48.8 | 49.71 |
| AT4G17880.1 | Thale cress | nucleus | 41.3 | 49.58 |
| Bra024998.1-P | Field mustard | nucleus | 39.46 | 48.1 |
| AT5G46760.1 | Thale cress | nucleus | 39.18 | 46.79 |
| KRH39540 | Soybean | nucleus | 48.23 | 46.65 |
| Bra013264.1-P | Field mustard | nucleus | 19.09 | 45.45 |
| Bra017523.1-P | Field mustard | nucleus | 31.68 | 44.18 |
| Bra017520.1-P | Field mustard | nucleus | 30.98 | 43.98 |
| Bra024992.1-P | Field mustard | nucleus | 16.55 | 43.17 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.26 | 42.75 |
| AT5G46830.1 | Thale cress | nucleus | 30.27 | 41.88 |
| Bra024993.1-P | Field mustard | nucleus | 22.21 | 41.64 |
| VIT_02s0025g02610.t01 | Wine grape | nucleus | 21.22 | 41.55 |
| PGSC0003DMT400014097 | Potato | nucleus | 24.19 | 37.42 |
| PGSC0003DMT400014089 | Potato | nucleus | 20.23 | 37.24 |
| KRH47834 | Soybean | nucleus | 24.19 | 36.85 |
| VIT_15s0048g02820.t01 | Wine grape | nucleus | 25.88 | 36.82 |
| Solyc10g009290.1.1 | Tomato | nucleus | 23.34 | 36.59 |
| PGSC0003DMT400047220 | Potato | nucleus | 23.2 | 36.28 |
| KRH06400 | Soybean | nucleus | 23.9 | 36.27 |
| PGSC0003DMT400028057 | Potato | nucleus | 19.94 | 36.25 |
| Solyc10g009270.2.1 | Tomato | nucleus | 20.08 | 36.13 |
| Solyc01g096370.2.1 | Tomato | nucleus | 22.91 | 36.0 |
| Solyc08g083170.1.1 | Tomato | extracellular | 19.38 | 35.4 |
| PGSC0003DMT400031899 | Potato | plastid | 21.07 | 34.57 |
| Solyc08g008600.2.1 | Tomato | nucleus | 22.07 | 34.51 |
| PGSC0003DMT400015017 | Potato | nucleus | 22.21 | 34.43 |
| KXG25462 | Sorghum | nucleus | 13.3 | 33.81 |
| EER99201 | Sorghum | nucleus | 14.0 | 33.45 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 13.01 | 33.33 |
| OQU86344 | Sorghum | nucleus | 12.02 | 33.2 |
| EES01345 | Sorghum | nucleus | 22.35 | 32.64 |
| OQU80778 | Sorghum | nucleus | 12.45 | 32.59 |
| OQU80776 | Sorghum | nucleus | 11.88 | 31.94 |
| OQU75588 | Sorghum | nucleus | 11.88 | 31.94 |
| AT4G00870.1 | Thale cress | nucleus, plastid | 19.09 | 31.91 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 12.45 | 31.54 |
| OQU80777 | Sorghum | nucleus | 11.74 | 29.64 |
| EER99993 | Sorghum | nucleus | 24.75 | 28.14 |
| EES19274 | Sorghum | nucleus | 22.21 | 26.75 |
| OQU82120 | Sorghum | nucleus | 16.69 | 20.07 |
| OQU82117 | Sorghum | nucleus | 16.55 | 19.83 |
| OQU81560 | Sorghum | nucleus | 15.56 | 18.68 |
| KXG37671 | Sorghum | nucleus | 9.05 | 17.98 |
| KXG39824 | Sorghum | nucleus | 8.2 | 17.79 |
| EER93685 | Sorghum | mitochondrion | 9.34 | 17.74 |
| EES10849 | Sorghum | nucleus | 8.63 | 17.68 |
| EER93684 | Sorghum | nucleus | 9.48 | 17.4 |
| OQU88697 | Sorghum | nucleus | 16.41 | 17.13 |
| KXG37866 | Sorghum | nucleus | 8.63 | 16.44 |
| OQU92034 | Sorghum | nucleus | 7.36 | 16.4 |
| OQU92032 | Sorghum | nucleus | 7.64 | 15.88 |
| OQU77369 | Sorghum | nucleus | 9.34 | 15.71 |
| OQU75589 | Sorghum | nucleus | 8.2 | 15.06 |
| KXG24110 | Sorghum | nucleus | 8.2 | 14.57 |
| OQU82119 | Sorghum | nucleus | 11.03 | 14.29 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1B6QMQ5 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KXG39194 |
| ProteinID:KXG39194 | ProteinID:KXG39194.2 | InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF43 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3001G287600 | SUPFAM:SSF47459 | UniParc:UPI000B8B9798 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:56318191..56321348
Molecular Weight (calculated)
75523.3 Da
IEP (calculated)
6.559
GRAVY (calculated)
-0.524
Length
707 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLWTDDNAS MMEAFMASAD LPTFPWGATA GGGNSSAAAA TPPPPPQMPA AAMAPGFNQD TLQQRLQAMI EGSSETWTYA IFWQSSLDAA TGASLLGWGD
101: GYYKGCDDDK RKQRPLTPAA QAEQEHRKRV LRELNSLISG AAAAPDEAVE EEVTDTEWFF LVSMTQSFLN GSGLPGQALF AGQPTWIASG LSSAPCERAR
201: QAYNFGLRTM VCFPVGTGVL ELGSTDVVFQ TAESMAKIRS LFGGGAGGGS WPPPQAPSHQ QPAAGPDQAE TDLWLADAPV MDIKDSMSHP SAEISVSKPP
301: PPPPPPQIHF ENASTSTLTE NPSPSVHAAP PQPAPAAAPQ RQHQHQNQAH QGPFRRELNF SDFASTNPSS LAATPPFFKP ESGEILSFGA DSNARRNPSP
401: APPAATASLT TAPGSLFSQH TATMTQAAAA NDAKNNNKRS MEATSRASNT NHHPAATANE GMLSFSSAPT TRPSTGTGAP AKSESDHSDL DASVREVESS
501: RVVAPPPEAE KRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA VVPNVSKMDK ASLLGDAISY INELRGKLTS LESDKDTLQA QIEALKKERD
601: ARPPAHAAGL GGHDGGPRCH AVEIDAKILG LEAMIRVQCH KRNHPSARLM TALRELDLDV YHASVSVVKD LMIQQVAVKM ASRIYSQDQL NAALYSRLAE
701: PGSAMGR
101: GYYKGCDDDK RKQRPLTPAA QAEQEHRKRV LRELNSLISG AAAAPDEAVE EEVTDTEWFF LVSMTQSFLN GSGLPGQALF AGQPTWIASG LSSAPCERAR
201: QAYNFGLRTM VCFPVGTGVL ELGSTDVVFQ TAESMAKIRS LFGGGAGGGS WPPPQAPSHQ QPAAGPDQAE TDLWLADAPV MDIKDSMSHP SAEISVSKPP
301: PPPPPPQIHF ENASTSTLTE NPSPSVHAAP PQPAPAAAPQ RQHQHQNQAH QGPFRRELNF SDFASTNPSS LAATPPFFKP ESGEILSFGA DSNARRNPSP
401: APPAATASLT TAPGSLFSQH TATMTQAAAA NDAKNNNKRS MEATSRASNT NHHPAATANE GMLSFSSAPT TRPSTGTGAP AKSESDHSDL DASVREVESS
501: RVVAPPPEAE KRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA VVPNVSKMDK ASLLGDAISY INELRGKLTS LESDKDTLQA QIEALKKERD
601: ARPPAHAAGL GGHDGGPRCH AVEIDAKILG LEAMIRVQCH KRNHPSARLM TALRELDLDV YHASVSVVKD LMIQQVAVKM ASRIYSQDQL NAALYSRLAE
701: PGSAMGR
001: MTDYRLQPTM NLWTTDDNAS MMEAFMSSSD ISTLWPPAST TTTTATTETT PTPAMEIPAQ AGFNQETLQQ RLQALIEGTH EGWTYAIFWQ PSYDFSGASV
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
Arabidopsis Description
MYC2ZBF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7C3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.