Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028312_P001 | Maize | nucleus | 77.91 | 79.38 |
| TraesCS4B01G234700.1 | Wheat | nucleus | 59.2 | 64.12 |
| TraesCS4D01G235900.1 | Wheat | nucleus | 61.35 | 62.11 |
| TraesCS4D01G330500.1 | Wheat | nucleus | 58.28 | 60.13 |
| TraesCS4A01G059100.1 | Wheat | nucleus | 60.12 | 59.04 |
| TraesCS5A01G505100.1 | Wheat | nucleus | 53.68 | 58.53 |
| TraesCS4B01G345800.1 | Wheat | nucleus | 53.68 | 56.27 |
| TraesCS5A01G555200.1 | Wheat | nucleus | 53.37 | 55.95 |
| TraesCS4B01G391500.1 | Wheat | nucleus | 53.68 | 54.52 |
| Os03t0229100-00 | Rice | plastid | 45.71 | 52.1 |
| TraesCS4B01G335200.1 | Wheat | nucleus | 38.04 | 50.41 |
| TraesCS5A01G555300.1 | Wheat | nucleus | 33.74 | 44.9 |
| HORVU4Hr1G065640.6 | Barley | nucleus | 35.89 | 34.31 |
| OQU92034 | Sorghum | nucleus | 32.82 | 33.75 |
| OQU92032 | Sorghum | nucleus | 32.82 | 31.47 |
| KXG37671 | Sorghum | nucleus | 29.75 | 27.25 |
| EES10849 | Sorghum | nucleus | 25.46 | 24.06 |
| KXG37866 | Sorghum | nucleus | 25.77 | 22.64 |
| KXG24110 | Sorghum | nucleus | 26.69 | 21.86 |
| EER93685 | Sorghum | mitochondrion | 23.62 | 20.7 |
| EER93684 | Sorghum | nucleus | 23.31 | 19.74 |
| OQU86344 | Sorghum | nucleus | 12.88 | 16.41 |
| OQU77369 | Sorghum | nucleus | 20.86 | 16.19 |
| OQU80777 | Sorghum | nucleus | 13.8 | 16.07 |
| OQU80778 | Sorghum | nucleus | 13.19 | 15.93 |
| OQU75589 | Sorghum | nucleus | 18.71 | 15.84 |
| KXG25462 | Sorghum | nucleus | 13.19 | 15.47 |
| OQU80776 | Sorghum | nucleus | 12.27 | 15.21 |
| OQU75588 | Sorghum | nucleus | 12.27 | 15.21 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 12.27 | 14.49 |
| EER99201 | Sorghum | nucleus | 12.88 | 14.19 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 11.35 | 13.26 |
| EES01345 | Sorghum | nucleus | 15.34 | 10.33 |
| OQU81560 | Sorghum | nucleus | 18.4 | 10.19 |
| OQU82117 | Sorghum | nucleus | 18.1 | 10.0 |
| OQU82119 | Sorghum | nucleus | 16.26 | 9.71 |
| OQU82120 | Sorghum | nucleus | 16.87 | 9.35 |
| OQU88697 | Sorghum | nucleus | 19.33 | 9.31 |
| EER99993 | Sorghum | nucleus | 16.87 | 8.84 |
| KXG39194 | Sorghum | nucleus | 17.79 | 8.2 |
| EES19274 | Sorghum | nucleus | 14.72 | 8.18 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | UniProt:A0A1B6QPJ6 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| EnsemblPlants:KXG39824 | ProteinID:KXG39824 | ProteinID:KXG39824.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11514 |
| PANTHER:PTHR11514:SF35 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3001G446500 | SUPFAM:SSF47459 | UniParc:UPI00081AD231 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:72333702..72340413
Molecular Weight (calculated)
36196.7 Da
IEP (calculated)
6.319
GRAVY (calculated)
-0.492
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MDELNKWHSH PDYSEEELAY MYRQQQEEEH AGMQQQHHFA EQQQYYTPPA AMAPPRSPSP FLEFLPHHHH HSSSFPGFGV PALPPRLPFG PVKNEPGQPS
101: SSSSNRILSF GGQPPSTLNF SSGGDWLEAG VEAVQQMPPE RRSRTHWNTQ EHVIAERKRR EKMQQQFVAL ATIVPDLTKT DKISLLGSTI EYVKQLEEKV
201: KTLEGRRERR TSDPTILETK CRISTDSDAS CSNDSAFAAG GFSPTVEASI HGDTVLLKIC CLERRGVLVM IISELENQGL SIINTSVLPF TDSCLNITIT
301: AKIGVGFSST VELITNLTAA LRGSST
101: SSSSNRILSF GGQPPSTLNF SSGGDWLEAG VEAVQQMPPE RRSRTHWNTQ EHVIAERKRR EKMQQQFVAL ATIVPDLTKT DKISLLGSTI EYVKQLEEKV
201: KTLEGRRERR TSDPTILETK CRISTDSDAS CSNDSAFAAG GFSPTVEASI HGDTVLLKIC CLERRGVLVM IISELENQGL SIINTSVLPF TDSCLNITIT
301: AKIGVGFSST VELITNLTAA LRGSST
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.