CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043706_P001	Maize	nucleus	85.95	89.08
Os01t0705700-01	Rice	nucleus	72.73	76.52
TraesCS3B01G288700.1	Wheat	nucleus	68.39	74.72
HORVU3Hr1G066390.1	Barley	nucleus	71.69	74.62
TraesCS3D01G253700.1	Wheat	nucleus	71.28	74.19
TraesCS3A01G252900.1	Wheat	nucleus	70.25	74.07
TraesCS3B01G284800.1	Wheat	nucleus	71.49	72.84
VIT_07s0141g01060.t01	Wine grape	nucleus	35.74	35.23
EER99993	Sorghum	nucleus	44.42	34.57
PGSC0003DMT400051672	Potato	nucleus	33.68	34.17
Solyc06g083980.1.1	Tomato	nucleus	33.47	33.96
CDY32242	Canola	nucleus	31.2	33.48
Bra038458.1-P	Field mustard	nucleus	31.2	33.48
CDY34468	Canola	nucleus	30.79	33.04
KRH32144	Soybean	nucleus	34.09	32.74
KRH19522	Soybean	nucleus	34.09	32.61
AT4G16430.1	Thale cress	nucleus	31.41	32.55
Bra012720.1-P	Field mustard	nucleus	29.75	31.58
CDX90525	Canola	nucleus	29.75	31.58
EES19274	Sorghum	nucleus	38.02	31.35
KXG25462	Sorghum	nucleus	16.12	28.06
CDY09695	Canola	nucleus	28.1	27.93
OQU80778	Sorghum	nucleus	15.29	27.41
OQU75588	Sorghum	nucleus	14.88	27.38
OQU80776	Sorghum	nucleus	14.88	27.38
EER97058	Sorghum	cytosol, nucleus, plastid	15.5	27.17
EER99201	Sorghum	nucleus	15.91	26.01
OQU86344	Sorghum	nucleus	13.64	25.78
OQU80777	Sorghum	nucleus	14.88	25.71
OQU80775	Sorghum	cytosol, nucleus, peroxisome, plastid	14.26	24.73
KXG39194	Sorghum	nucleus	32.64	22.35
OQU81560	Sorghum	nucleus	22.52	18.51
OQU82117	Sorghum	nucleus	22.52	18.47
OQU82120	Sorghum	nucleus	21.49	17.69
EES10849	Sorghum	nucleus	11.98	16.81
EER93685	Sorghum	mitochondrion	12.6	16.4
KXG37671	Sorghum	nucleus	11.98	16.29
KXG39824	Sorghum	nucleus	10.33	15.34
EER93684	Sorghum	nucleus	12.19	15.32
KXG37866	Sorghum	nucleus	11.57	15.09
OQU82119	Sorghum	nucleus	16.94	15.02
OQU88697	Sorghum	nucleus	19.42	13.88
OQU92034	Sorghum	nucleus	9.09	13.88
KXG24110	Sorghum	nucleus	11.16	13.57
OQU92032	Sorghum	nucleus	9.5	13.53
OQU77369	Sorghum	nucleus	11.36	13.1
OQU75589	Sorghum	nucleus	10.12	12.73

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:8059158	UniProt:C5XHM5	EnsemblPlants:EES01345	ProteinID:EES01345
ProteinID:EES01345.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0010629	GO:GO:0044212	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	InterPro:MYC/MYB_N	PFAM:PF00010	PFAM:PF14215	PFscan:PS50888	PANTHER:PTHR11514
PANTHER:PTHR11514:SF59	SMART:SM00353	EnsemblPlantsGene:SORBI_3003G272200	SUPFAM:SSF47459	unigene:Sbi.20519	UniParc:UPI0001A847BC
RefSeq:XP_002456225.1	InterPro:bHLH_dom	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:60842728..60845261

Molecular Weight (calculated)

51222.3 Da

IEP (calculated)

7.742

GRAVY (calculated)

-0.388

Length

484 amino acids

Sequence
(BLAST)

001: MAWSETDAAL FAAVLGRDAA HHLATTPPHL GGPAASASAS APELQARLQD LVERGSGAWT YGIFWQESRA GGRAVLGWGD GHCRDASGGG SASASHDDDD
101: DAAERSVARK RALLRLHALY GGGDGDDEGA DYALRLDRVT AAEMYFLASM YFSFPEGAGG PGHALASGRH AWATVDPHHP RGPGAGAAPA WYVRASLAQS
201: AGLRTVVFLP CKGGVLELGS VVPVRETPET VRAIQTALAV APPPAREECM RIFGKDLSPS GRTPRSGDNW APQQLGVQAT ASKEAAAARP KAPEPPPRSI
301: DFTKPPGKPE QQAGVGEERR PRKRGRKPAN GREEPLNHVE AERQRREKLN QRFYALRAVV PKISKMDKAS LLSDAIAYIQ ELEDRLRGGG GCSAARPESP
401: AVEVKAMQDE VVLRVTTPLY AHPVSRVFHA IRDAQLSVAA SDVSVADDAV THTLVLRSAG PEQLTAETVL AAMSRGMTSA TPSP

Best Arabidopsis Sequence Match ( AT2G46510.1 )
(BLAST)

001: MNMSDLGWDD EDKSVVSAVL GHLASDFLRA NSNSNQNLFL VMGTDDTLNK KLSSLVDWPN SENFSWNYAI FWQQTMSRSG QQVLGWGDGC CREPNEEEES
101: KVVRSYNFNN MGAEEETWQD MRKRVLQKLH RLFGGSDEDN YALSLEKVTA TEIFFLASMY FFFNHGEGGP GRCYSSGKHV WLSDAVNSES DYCFRSFMAK
201: SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG
301: PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE
401: RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAISYIKEL QEKVKIMEDE RVGTDKSLSE SNTITVEESP EVDIQAMNEE VVVRVISPLD SHPASRIIQA
501: MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL IAAFYPETSS TQPPLPSSSS QVSGDI

Arabidopsis Description

AIBTranscription factor ABA-INDUCIBLE bHLH-TYPE [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.