Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G252900.1 | Wheat | nucleus | 93.23 | 89.98 |
| TraesCS3D01G253700.1 | Wheat | nucleus | 94.36 | 89.89 |
| TraesCS3B01G284800.1 | Wheat | nucleus | 93.0 | 86.74 |
| HORVU3Hr1G066390.1 | Barley | nucleus | 89.39 | 85.16 |
| Os01t0705700-01 | Rice | nucleus | 75.85 | 73.04 |
| Zm00001d043706_P001 | Maize | nucleus | 72.23 | 68.52 |
| EES01345 | Sorghum | nucleus | 74.72 | 68.39 |
| Bra038458.1-P | Field mustard | nucleus | 34.31 | 33.7 |
| CDY32242 | Canola | nucleus | 34.31 | 33.7 |
| CDY34468 | Canola | nucleus | 34.09 | 33.48 |
| VIT_07s0141g01060.t01 | Wine grape | nucleus | 37.02 | 33.4 |
| AT4G16430.1 | Thale cress | nucleus | 34.99 | 33.19 |
| Bra012720.1-P | Field mustard | nucleus | 33.41 | 32.46 |
| CDX90525 | Canola | nucleus | 33.41 | 32.46 |
| PGSC0003DMT400051672 | Potato | nucleus | 34.31 | 31.87 |
| KRH19522 | Soybean | nucleus | 36.34 | 31.82 |
| KRH32144 | Soybean | nucleus | 35.89 | 31.55 |
| Solyc06g083980.1.1 | Tomato | nucleus | 33.86 | 31.45 |
| TraesCS4B01G276900.1 | Wheat | nucleus | 42.21 | 31.27 |
| TraesCS3B01G185400.1 | Wheat | nucleus | 42.66 | 30.24 |
| CDY09695 | Canola | nucleus | 31.6 | 28.75 |
| TraesCS5B01G307000.1 | Wheat | nucleus | 17.16 | 27.24 |
| TraesCS5B01G306800.1 | Wheat | nucleus | 16.7 | 26.43 |
| TraesCS5B01G307100.1 | Wheat | nucleus | 16.03 | 26.01 |
| TraesCS5B01G306600.1 | Wheat | nucleus | 15.8 | 25.64 |
| TraesCS2B01G469200.1 | Wheat | nucleus | 13.77 | 24.8 |
| TraesCS2B01G469300.1 | Wheat | nucleus | 14.22 | 24.61 |
| TraesCS1B01G387900.1 | Wheat | nucleus | 12.87 | 23.85 |
| TraesCS1B01G208000.1 | Wheat | nucleus | 34.31 | 21.93 |
| TraesCS2B01G428000.1 | Wheat | nucleus | 24.15 | 18.67 |
| TraesCS4B01G397400.1 | Wheat | nucleus | 23.48 | 18.44 |
| TraesCS4B01G397800.1 | Wheat | nucleus | 20.32 | 17.65 |
| TraesCS4B01G335200.1 | Wheat | nucleus | 9.48 | 17.07 |
| TraesCS4B01G345800.1 | Wheat | nucleus | 11.96 | 17.04 |
| TraesCS4B01G234700.1 | Wheat | nucleus | 11.06 | 16.28 |
| TraesCS1B01G112900.1 | Wheat | nucleus | 22.57 | 15.85 |
| TraesCS7B01G483600.1 | Wheat | nucleus | 11.29 | 15.58 |
| TraesCS5B01G518400.1 | Wheat | nucleus | 11.29 | 15.38 |
| TraesCS4B01G020700.1 | Wheat | nucleus | 12.64 | 15.34 |
| TraesCS4B01G021500.1 | Wheat | nucleus | 12.19 | 15.13 |
| TraesCS5B01G518500.1 | Wheat | nucleus | 11.06 | 15.08 |
| TraesCS4B01G397300.1 | Wheat | nucleus | 13.77 | 14.99 |
| TraesCS4B01G391500.1 | Wheat | nucleus | 10.84 | 14.95 |
| TraesCS3B01G029800.1 | Wheat | nucleus | 11.06 | 14.94 |
| TraesCS1B01G113100.4 | Wheat | nucleus | 23.02 | 14.83 |
| TraesCS4B01G308100.1 | Wheat | nucleus | 11.51 | 14.7 |
| TraesCS4B01G021100.1 | Wheat | nucleus | 11.96 | 14.6 |
| TraesCS4B01G020900.1 | Wheat | nucleus | 11.96 | 14.32 |
| TraesCS5B01G518800.1 | Wheat | nucleus | 10.16 | 14.29 |
| TraesCS4B01G308200.1 | Wheat | nucleus | 11.51 | 14.17 |
| TraesCS4B01G308300.1 | Wheat | nucleus | 11.51 | 14.01 |
| TraesCS4B01G021200.1 | Wheat | nucleus | 11.29 | 13.55 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 11.29 | 13.37 |
| TraesCS5B01G013000.2 | Wheat | nucleus | 10.61 | 12.43 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G288700.1 | EnsemblPlantsGene:TraesCS3B01G288700 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | InterPro:bHLH_dom |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF59 | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | TIGR:cd00083 | MapMan:15.5.32 | : | : |
Description
No Description!
Coordinates
chr3B:+:463203072..463205129
Molecular Weight (calculated)
47534.2 Da
IEP (calculated)
8.638
GRAVY (calculated)
-0.359
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWSDTDAAL FAAVLGHDAA RHLATTPPHL DGPASSSPEL QARLYDLVER GGAWTYGIYW QESRAGAGVL GWGDGHCRDG PAEQAGATDR SLARKRALLR
101: LHALYGGGDE DGADYALRLD RVTGVEMYFL ASMYFSFRED AGGPGRALTS GHHAWAAVDP HLPGSPGWYV RASLAQSAGL RTVVFLPCKG GVLELGSAVA
201: MRENPEVLRA IQSAFHVESA SPDDHMRIFG KDVSRGSPMP PAQTTGSDAS WALRPSRRWR RNAVDAQKQA GGEERRPRKR GRKPANGREE PLNHVEAERQ
301: RREKLNQRFY ALRAVVPKIS KMDKASLLSD AIAYIPELEE RLRGGAAGPA PARAEAGPSV EVKAMQDEVV LRVSTPLDAH PISGALSAMR DSQLSVVASS
401: MAVADDTVTH TLVVRSAGAD RLTAETVLAA ISRGVMMSAT PSP
101: LHALYGGGDE DGADYALRLD RVTGVEMYFL ASMYFSFRED AGGPGRALTS GHHAWAAVDP HLPGSPGWYV RASLAQSAGL RTVVFLPCKG GVLELGSAVA
201: MRENPEVLRA IQSAFHVESA SPDDHMRIFG KDVSRGSPMP PAQTTGSDAS WALRPSRRWR RNAVDAQKQA GGEERRPRKR GRKPANGREE PLNHVEAERQ
301: RREKLNQRFY ALRAVVPKIS KMDKASLLSD AIAYIPELEE RLRGGAAGPA PARAEAGPSV EVKAMQDEVV LRVSTPLDAH PISGALSAMR DSQLSVVASS
401: MAVADDTVTH TLVVRSAGAD RLTAETVLAA ISRGVMMSAT PSP
001: MGQKFWENQE DRAMVESTIG SEACDFFIST ASASNTALSK LVSPPSDSNL QQGLRHVVEG SDWDYALFWL ASNVNSSDGC VLIWGDGHCR VKKGASGEDY
101: SQQDEIKRRV LRKLHLSFVG SDEDHRLVKS GALTDLDMFY LASLYFSFRC DTNKYGPAGT YVSGKPLWAA DLPSCLSYYR VRSFLARSAG FQTVLSVPVN
201: SGVVELGSLR HIPEDKSVIE MVKSVFGGSD FVQAKEAPKI FGRQLSLGGA KPRSMSINFS PKTEDDTGFS LESYEVQAIG GSNQVYGYEQ GKDETLYLTD
301: EQKPRKRGRK PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLADAIT YITDMQKKIR VYETEKQIMK RRESNQITPA EVDYQQRHDD
401: AVVRLSCPLE THPVSKVIQT LRENEVMPHD SNVAITEEGV VHTFTLRPQG GCTAEQLKDK LLASLSQ
101: SQQDEIKRRV LRKLHLSFVG SDEDHRLVKS GALTDLDMFY LASLYFSFRC DTNKYGPAGT YVSGKPLWAA DLPSCLSYYR VRSFLARSAG FQTVLSVPVN
201: SGVVELGSLR HIPEDKSVIE MVKSVFGGSD FVQAKEAPKI FGRQLSLGGA KPRSMSINFS PKTEDDTGFS LESYEVQAIG GSNQVYGYEQ GKDETLYLTD
301: EQKPRKRGRK PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLADAIT YITDMQKKIR VYETEKQIMK RRESNQITPA EVDYQQRHDD
401: AVVRLSCPLE THPVSKVIQT LRENEVMPHD SNVAITEEGV VHTFTLRPQG GCTAEQLKDK LLASLSQ
Arabidopsis Description
BHLH3Transcription factor bHLH3 [Source:UniProtKB/Swiss-Prot;Acc:O23487]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.