Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G558700.1 | Wheat | nucleus | 90.34 | 90.34 |
| HORVU7Hr1G120420.2 | Barley | nucleus | 70.09 | 58.29 |
| TraesCS5B01G013000.2 | Wheat | nucleus | 50.16 | 42.59 |
| KXG24110 | Sorghum | nucleus | 50.78 | 40.95 |
| Zm00001d031167_P002 | Maize | nucleus | 49.53 | 40.46 |
| Os12t0632600-00 | Rice | nucleus | 44.24 | 40.34 |
| TraesCS4B01G021500.1 | Wheat | nucleus | 38.32 | 34.45 |
| TraesCS5B01G518400.1 | Wheat | nucleus | 34.27 | 33.85 |
| TraesCS4B01G020900.1 | Wheat | nucleus | 38.32 | 33.24 |
| TraesCS4B01G308100.1 | Wheat | nucleus | 35.83 | 33.14 |
| TraesCS5B01G518800.1 | Wheat | nucleus | 32.09 | 32.7 |
| TraesCS4B01G020700.1 | Wheat | nucleus | 37.07 | 32.6 |
| TraesCS4B01G021200.1 | Wheat | nucleus | 37.38 | 32.52 |
| TraesCS4B01G021100.1 | Wheat | nucleus | 36.76 | 32.51 |
| TraesCS5B01G518500.1 | Wheat | nucleus | 32.4 | 32.0 |
| TraesCS4B01G308300.1 | Wheat | nucleus | 36.14 | 31.87 |
| TraesCS4B01G308200.1 | Wheat | nucleus | 35.51 | 31.67 |
| TraesCS3B01G029800.1 | Wheat | nucleus | 30.22 | 29.57 |
| TraesCS4B01G234700.1 | Wheat | nucleus | 21.18 | 22.59 |
| TraesCS4B01G345800.1 | Wheat | nucleus | 21.81 | 22.51 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 25.86 | 22.19 |
| TraesCS4B01G391500.1 | Wheat | nucleus | 19.94 | 19.94 |
| TraesCS4B01G335200.1 | Wheat | nucleus | 11.53 | 15.04 |
| TraesCS2B01G469200.1 | Wheat | nucleus | 10.59 | 13.82 |
| TraesCS2B01G469300.1 | Wheat | nucleus | 10.59 | 13.28 |
| TraesCS5B01G307000.1 | Wheat | nucleus | 11.53 | 13.26 |
| TraesCS5B01G307100.1 | Wheat | nucleus | 11.21 | 13.19 |
| TraesCS5B01G306600.1 | Wheat | nucleus | 10.9 | 12.82 |
| TraesCS5B01G306800.1 | Wheat | nucleus | 10.59 | 12.14 |
| TraesCS3B01G288700.1 | Wheat | nucleus | 15.58 | 11.29 |
| TraesCS4B01G397300.1 | Wheat | nucleus | 14.02 | 11.06 |
| TraesCS1B01G387900.1 | Wheat | nucleus | 7.79 | 10.46 |
| TraesCS3B01G284800.1 | Wheat | nucleus | 15.26 | 10.32 |
| TraesCS4B01G397400.1 | Wheat | nucleus | 15.89 | 9.04 |
| TraesCS2B01G428000.1 | Wheat | nucleus | 15.89 | 8.9 |
| TraesCS4B01G397800.1 | Wheat | nucleus | 13.71 | 8.63 |
| TraesCS1B01G208000.1 | Wheat | nucleus | 18.38 | 8.51 |
| TraesCS4B01G276900.1 | Wheat | nucleus | 15.26 | 8.19 |
| TraesCS3B01G185400.1 | Wheat | nucleus | 14.64 | 7.52 |
| TraesCS1B01G112900.1 | Wheat | nucleus | 14.33 | 7.29 |
| TraesCS1B01G113100.4 | Wheat | nucleus | 15.58 | 7.27 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G483600.1 | EnsemblPlantsGene:TraesCS7B01G483600 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR23042 | PANTHER:PTHR23042:SF74 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | TIGR:cd00083 | MapMan:15.5.32 | MapMan:25.4.1.7 | : | : |
Description
No Description!
Coordinates
chr7B:-:741454676..741460973
Molecular Weight (calculated)
34983.4 Da
IEP (calculated)
8.244
GRAVY (calculated)
-0.369
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESSFTQWA LNTLDQHTFP AAASPVYYTD SFHCGDHTAA AFPSQQELCT PRQPLPTAAG DKPDLTVQVD NQYGDSSSGD AVVHATVARA STPMSWKSSA
101: PSTQSAVRGG HKRAAGRRSG RNLQASAVSA SSVSPDPANG HIIAERRRRE KINQRLMELS TLIPGLKKMN KATIIGDAVK HLRELQEKVN ILENNNRYAA
201: TTTICSTVLV HKNRPCLGGL TSNYGDDNVG QPSQLGTWLP EIKVRFSDKS VLVQIHCENT NGLLVRVLAE VEVLRLAITH TSSMPFLADT TIINITAKLG
301: EGFNTTMEEM VRRINSVLDQ H
101: PSTQSAVRGG HKRAAGRRSG RNLQASAVSA SSVSPDPANG HIIAERRRRE KINQRLMELS TLIPGLKKMN KATIIGDAVK HLRELQEKVN ILENNNRYAA
201: TTTICSTVLV HKNRPCLGGL TSNYGDDNVG QPSQLGTWLP EIKVRFSDKS VLVQIHCENT NGLLVRVLAE VEVLRLAITH TSSMPFLADT TIINITAKLG
301: EGFNTTMEEM VRRINSVLDQ H
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.