Factsheet for TraesCS7A01G558700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G483600.1	Wheat	nucleus	90.34	90.34
HORVU7Hr1G120420.2	Barley	nucleus	72.9	60.62
TraesCS5A01G014800.1	Wheat	nucleus	56.39	46.06
KXG24110	Sorghum	nucleus	53.27	42.96
Os12t0632600-00	Rice	nucleus	46.42	42.33
Zm00001d031167_P002	Maize	nucleus	51.71	42.24
TraesCS4A01G354100.1	Wheat	nucleus	36.45	36.0
TraesCS4A01G292800.1	Wheat	nucleus	40.5	35.33
TraesCS3A01G019000.1	Wheat	nucleus	34.27	34.48
TraesCS4A01G292700.1	Wheat	nucleus	38.32	34.26
TraesCS4A01G408700.1	Wheat	nucleus	27.41	32.59
TraesCS4A01G408800.1	Wheat	nucleus	38.32	32.03
TraesCS3A01G019100.1	Wheat	nucleus	30.53	30.82
TraesCS4A01G257900.2	Wheat	nucleus	27.41	23.34
TraesCS5A01G555200.1	Wheat	nucleus	22.43	23.15
TraesCS5A01G505100.1	Wheat	nucleus	21.5	23.08
TraesCS4A01G059100.1	Wheat	nucleus	21.81	21.08
TraesCS5A01G306400.1	Wheat	nucleus	11.53	16.59
TraesCS1A01G369200.1	Wheat	nucleus	9.66	15.66
TraesCS2A01G448500.1	Wheat	nucleus	12.46	15.62
TraesCS5A01G306600.1	Wheat	nucleus	12.46	14.55
TraesCS5A01G306200.1	Wheat	nucleus	12.46	14.34
TraesCS5A01G306700.1	Wheat	peroxisome	12.15	14.23
TraesCS5A01G555300.1	Wheat	nucleus	10.59	13.88
TraesCS5A01G306500.1	Wheat	nucleus	11.84	13.52
TraesCS3A01G252900.1	Wheat	nucleus	13.4	9.37
TraesCS2A01G409600.2	Wheat	nucleus, plastid	16.2	9.32
TraesCS5A01G489500.1	Wheat	nucleus	16.51	9.3
TraesCS2A01G409400.1	Wheat	nucleus	16.2	9.15
TraesCS5A01G558500.1	Wheat	nucleus	16.51	9.06
TraesCS1A01G193200.1	Wheat	nucleus	18.07	8.37
TraesCS4A01G028900.1	Wheat	nucleus	15.26	8.21
TraesCS3A01G158600.1	Wheat	nucleus	14.33	7.47
TraesCS1A01G102400.2	Wheat	nucleus, vacuole	14.33	7.35

Protein Annotations

EnsemblPlants:TraesCS7A01G558700.1	EnsemblPlantsGene:TraesCS7A01G558700	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	ncoils:Coil
PANTHER:PTHR23042	PANTHER:PTHR23042:SF74	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	TIGR:cd00083	MapMan:15.5.32	MapMan:25.4.1.7	:	:

Description

No Description!

Coordinates

chr7A:-:730853311..730860017

Molecular Weight (calculated)

34717.0 Da

IEP (calculated)

6.795

GRAVY (calculated)

-0.356

Length

321 amino acids

Sequence
(BLAST)

001: MEESSFMQWA INTLDQHTFP AAASLVYDTG SFHCGDHTAA SFPSQQELGT PPQPLPTTAG DNPDLTVQVD NQYGDSSSGD VVVHAAVARA STPMSWKSSA
101: ASTQPAARGG HKSAAGRRSG SNLQGSAASA SSMSPDPAKD HIIAERRRRE KINQRLMELS TLIPGLKKMN KATIIGDAVK HVRELQEKVN ILENNNKHAA
201: TTTICSTVLV HKNRPCLGGL TSNYGDDNVS EPSQLGTWLP EIKVRFSDKS VLVQIHCENT NGLLVRVLAE VEVLRLAITH TSSMPFLADT TIINITAKLE
301: EGFNSTVEEM VRRLNSVLDQ H

Best Arabidopsis Sequence Match ( AT4G37850.1 )
(BLAST)

001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI

Arabidopsis Description

BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.