Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G253700.1 | Wheat | nucleus | 96.51 | 95.27 |
| TraesCS3B01G288700.1 | Wheat | nucleus | 89.98 | 93.23 |
| TraesCS3B01G284800.1 | Wheat | nucleus | 94.55 | 91.37 |
| HORVU3Hr1G066390.1 | Barley | nucleus | 89.54 | 88.39 |
| Os01t0705700-01 | Rice | nucleus | 73.64 | 73.48 |
| Zm00001d043706_P001 | Maize | nucleus | 71.68 | 70.45 |
| EES01345 | Sorghum | nucleus | 74.07 | 70.25 |
| VIT_07s0141g01060.t01 | Wine grape | nucleus | 36.6 | 34.22 |
| CDY32242 | Canola | nucleus | 32.9 | 33.48 |
| Bra038458.1-P | Field mustard | nucleus | 32.9 | 33.48 |
| TraesCS4A01G028900.1 | Wheat | nucleus | 43.36 | 33.33 |
| CDY34468 | Canola | nucleus | 32.68 | 33.26 |
| AT4G16430.1 | Thale cress | nucleus | 33.77 | 33.19 |
| Bra012720.1-P | Field mustard | nucleus | 32.24 | 32.46 |
| CDX90525 | Canola | nucleus | 32.24 | 32.46 |
| TraesCS3A01G158600.1 | Wheat | nucleus | 43.36 | 32.31 |
| PGSC0003DMT400051672 | Potato | nucleus | 33.12 | 31.87 |
| KRH19522 | Soybean | nucleus | 35.08 | 31.82 |
| Solyc06g083980.1.1 | Tomato | nucleus | 32.68 | 31.45 |
| KRH32144 | Soybean | nucleus | 34.42 | 31.35 |
| CDY09695 | Canola | nucleus | 30.5 | 28.75 |
| TraesCS5A01G306200.1 | Wheat | nucleus | 16.78 | 27.6 |
| TraesCS1A01G369200.1 | Wheat | nucleus | 11.76 | 27.27 |
| TraesCS5A01G306500.1 | Wheat | nucleus | 16.34 | 26.69 |
| TraesCS5A01G306400.1 | Wheat | nucleus | 12.85 | 26.46 |
| TraesCS5A01G306700.1 | Wheat | peroxisome | 15.47 | 25.91 |
| TraesCS5A01G306600.1 | Wheat | nucleus | 15.47 | 25.82 |
| TraesCS2A01G448500.1 | Wheat | nucleus | 13.51 | 24.22 |
| TraesCS1A01G193200.1 | Wheat | nucleus | 33.55 | 22.22 |
| TraesCS2A01G409400.1 | Wheat | nucleus | 23.75 | 19.19 |
| TraesCS2A01G409600.2 | Wheat | nucleus, plastid | 23.31 | 19.18 |
| TraesCS5A01G558500.1 | Wheat | nucleus | 22.88 | 17.95 |
| TraesCS5A01G489500.1 | Wheat | nucleus | 22.22 | 17.89 |
| TraesCS5A01G555300.1 | Wheat | nucleus | 9.15 | 17.14 |
| TraesCS5A01G505100.1 | Wheat | nucleus | 10.89 | 16.72 |
| TraesCS5A01G555200.1 | Wheat | nucleus | 11.11 | 16.4 |
| TraesCS1A01G102400.2 | Wheat | nucleus, vacuole | 21.35 | 15.65 |
| TraesCS3A01G019100.1 | Wheat | nucleus | 10.68 | 15.41 |
| TraesCS4A01G059100.1 | Wheat | nucleus | 11.11 | 15.36 |
| TraesCS3A01G019000.1 | Wheat | nucleus | 10.68 | 15.36 |
| TraesCS4A01G408700.1 | Wheat | nucleus | 8.71 | 14.81 |
| TraesCS4A01G354100.1 | Wheat | nucleus | 10.46 | 14.77 |
| TraesCS4A01G292700.1 | Wheat | nucleus | 11.33 | 14.48 |
| TraesCS4A01G292800.1 | Wheat | nucleus | 11.55 | 14.4 |
| TraesCS4A01G408800.1 | Wheat | nucleus | 11.98 | 14.32 |
| TraesCS7A01G558700.1 | Wheat | nucleus | 9.37 | 13.4 |
| TraesCS5A01G014800.1 | Wheat | nucleus | 11.33 | 13.23 |
| TraesCS4A01G257900.2 | Wheat | nucleus | 10.68 | 13.0 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010629 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF00010 |
| PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF59 | SMART:SM00353 | SUPFAM:SSF47459 |
| EnsemblPlantsGene:TraesCS3A01G252900 | EnsemblPlants:TraesCS3A01G252900.1 | InterPro:bHLH_dom | TIGR:cd00083 | SEG:seg | : |
Description
No Description!
Coordinates
chr3A:-:474209127..474210506
Molecular Weight (calculated)
49176.3 Da
IEP (calculated)
8.626
GRAVY (calculated)
-0.342
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWSDTDAAL FAAVLGHDAA RHLATTPPHL DGPASSSPEL QTRLYDLVER GGAWTYGIYW QESRAGAGVL GWGDGHCRDG PAEQAGATDR SLARKRALLR
101: LHALYGGGDE DGADYALRLD RVTGVEMYFL ASMYFSFRED AGGPGRALTS GHHAWAAVDP HLPAAPGWYV RASLAQSAGL RTVVFLPCKG GVLELGSAVA
201: MRENPEVLRA IQSVFHVEAV APDDRMRIFG KDVSRSPPLP PVQTTGSDAS WALRLGGQAK QEAAAAKPKP QQEPPKTISF SNAVGAQKQA GGEDRRPRKR
301: GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPKIS KMDKASLLSD AIAYIQELEE RLRGGAPARA EAGPSVEVKA MQDEVVLRVS TPLDAHPISG
401: PLSAMRDSQL NVVASSMAVA DDTVTHTLVV RSAGPERLTA EAVLAAISRG VMMSATPSP
101: LHALYGGGDE DGADYALRLD RVTGVEMYFL ASMYFSFRED AGGPGRALTS GHHAWAAVDP HLPAAPGWYV RASLAQSAGL RTVVFLPCKG GVLELGSAVA
201: MRENPEVLRA IQSVFHVEAV APDDRMRIFG KDVSRSPPLP PVQTTGSDAS WALRLGGQAK QEAAAAKPKP QQEPPKTISF SNAVGAQKQA GGEDRRPRKR
301: GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPKIS KMDKASLLSD AIAYIQELEE RLRGGAPARA EAGPSVEVKA MQDEVVLRVS TPLDAHPISG
401: PLSAMRDSQL NVVASSMAVA DDTVTHTLVV RSAGPERLTA EAVLAAISRG VMMSATPSP
001: MGQKFWENQE DRAMVESTIG SEACDFFIST ASASNTALSK LVSPPSDSNL QQGLRHVVEG SDWDYALFWL ASNVNSSDGC VLIWGDGHCR VKKGASGEDY
101: SQQDEIKRRV LRKLHLSFVG SDEDHRLVKS GALTDLDMFY LASLYFSFRC DTNKYGPAGT YVSGKPLWAA DLPSCLSYYR VRSFLARSAG FQTVLSVPVN
201: SGVVELGSLR HIPEDKSVIE MVKSVFGGSD FVQAKEAPKI FGRQLSLGGA KPRSMSINFS PKTEDDTGFS LESYEVQAIG GSNQVYGYEQ GKDETLYLTD
301: EQKPRKRGRK PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLADAIT YITDMQKKIR VYETEKQIMK RRESNQITPA EVDYQQRHDD
401: AVVRLSCPLE THPVSKVIQT LRENEVMPHD SNVAITEEGV VHTFTLRPQG GCTAEQLKDK LLASLSQ
101: SQQDEIKRRV LRKLHLSFVG SDEDHRLVKS GALTDLDMFY LASLYFSFRC DTNKYGPAGT YVSGKPLWAA DLPSCLSYYR VRSFLARSAG FQTVLSVPVN
201: SGVVELGSLR HIPEDKSVIE MVKSVFGGSD FVQAKEAPKI FGRQLSLGGA KPRSMSINFS PKTEDDTGFS LESYEVQAIG GSNQVYGYEQ GKDETLYLTD
301: EQKPRKRGRK PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLADAIT YITDMQKKIR VYETEKQIMK RRESNQITPA EVDYQQRHDD
401: AVVRLSCPLE THPVSKVIQT LRENEVMPHD SNVAITEEGV VHTFTLRPQG GCTAEQLKDK LLASLSQ
Arabidopsis Description
BHLH3Transcription factor bHLH3 [Source:UniProtKB/Swiss-Prot;Acc:O23487]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.