Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01345 | Sorghum | nucleus | 89.08 | 85.95 |
| Os01t0705700-01 | Rice | nucleus | 72.16 | 73.26 |
| TraesCS3B01G288700.1 | Wheat | nucleus | 68.52 | 72.23 |
| HORVU3Hr1G066390.1 | Barley | nucleus | 71.73 | 72.04 |
| TraesCS3D01G253700.1 | Wheat | nucleus | 71.52 | 71.83 |
| TraesCS3A01G252900.1 | Wheat | nucleus | 70.45 | 71.68 |
| TraesCS3B01G284800.1 | Wheat | nucleus | 71.73 | 70.53 |
| Zm00001d009013_P001 | Maize | nucleus | 44.97 | 34.37 |
| Zm00001d039271_P001 | Maize | nucleus | 44.75 | 33.93 |
| CDY32242 | Canola | nucleus | 32.55 | 33.7 |
| Bra038458.1-P | Field mustard | nucleus | 32.55 | 33.7 |
| CDY34468 | Canola | nucleus | 32.33 | 33.48 |
| PGSC0003DMT400051672 | Potato | nucleus | 34.05 | 33.33 |
| Solyc06g083980.1.1 | Tomato | nucleus | 33.83 | 33.12 |
| VIT_07s0141g01060.t01 | Wine grape | nucleus | 34.69 | 32.99 |
| AT4G16430.1 | Thale cress | nucleus | 32.76 | 32.76 |
| Bra012720.1-P | Field mustard | nucleus | 31.05 | 31.8 |
| CDX90525 | Canola | nucleus | 31.05 | 31.8 |
| KRH32144 | Soybean | nucleus | 34.26 | 31.75 |
| KRH19522 | Soybean | nucleus | 34.26 | 31.62 |
| CDY09695 | Canola | nucleus | 29.55 | 28.34 |
| Zm00001d031717_P001 | Maize | nucleus | 14.99 | 27.56 |
| Zm00001d052728_P001 | Maize | nucleus | 16.06 | 27.27 |
| Zm00001d006150_P001 | Maize | nucleus | 16.7 | 26.8 |
| Zm00001d021164_P001 | Maize | nucleus | 15.85 | 25.52 |
| Zm00001d007536_P001 | Maize | plastid | 30.84 | 23.72 |
| Zm00001d047017_P001 | Maize | nucleus | 33.83 | 22.48 |
| Zm00001d030028_P001 | Maize | nucleus | 33.4 | 22.13 |
| Zm00001d000236_P001 | Maize | nucleus, plastid | 20.77 | 17.41 |
| Zm00001d026147_P002 | Maize | nucleus | 22.91 | 17.37 |
| Zm00001d033413_P001 | Maize | nucleus | 11.35 | 16.67 |
| Zm00001d030232_P001 | Maize | nucleus | 11.13 | 16.25 |
| Zm00001d025462_P001 | Maize | nucleus | 11.35 | 16.06 |
| Zm00001d013370_P001 | Maize | plastid | 12.63 | 15.82 |
| Zm00001d003604_P001 | Maize | nucleus | 11.35 | 15.77 |
| Zm00001d038966_P001 | Maize | plastid | 6.85 | 15.69 |
| Zm00001d026009_P001 | Maize | plastid | 6.64 | 15.2 |
| Zm00001d033848_P004 | Maize | nucleus | 11.78 | 15.11 |
| Zm00001d033407_P001 | Maize | nucleus | 10.92 | 14.33 |
| Zm00001d028312_P001 | Maize | nucleus | 9.64 | 14.06 |
| Zm00001d028314_P001 | Maize | nucleus | 5.57 | 13.9 |
| Zm00001d019170_P001 | Maize | nucleus | 19.91 | 13.8 |
| Zm00001d031167_P002 | Maize | nucleus | 11.13 | 13.23 |
| Zm00001d024781_P001 | Maize | nucleus | 9.64 | 12.75 |
| Zm00001d028315_P001 | Maize | cytosol | 3.64 | 12.59 |
| Zm00001d033412_P001 | Maize | nucleus | 9.85 | 12.47 |
Protein Annotations
| EntrezGene:100284359 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A060D780 | ProteinID:AIB05189.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010629 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | InterPro:MYC/MYB_N | ProteinID:ONM38881.1 | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF59 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002212DD4 | EnsemblPlantsGene:Zm00001d043706 |
| EnsemblPlants:Zm00001d043706_P001 | EnsemblPlants:Zm00001d043706_T001 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
bHLH-transcription factor 57DNA binding protein
Coordinates
chr3:-:207941097..207942500
Molecular Weight (calculated)
49594.5 Da
IEP (calculated)
7.501
GRAVY (calculated)
-0.350
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MAWSETDAAL FAAVLGRDAA HHLSTTPPHQ DAPAASAPEL QARLQDLVER GGAWTYGIFW QESCAGGRAV LGWGDGHCRD GGAPHHDDAD RSVARKRALL
101: RLHALYGGGD DEGADYALRL DRVTAAEMYF LASMYFSFPE GAGGPGHALA TARHAWATVD PAPGWYVRAS LAQSAGLRTV VFLPCKGGVL ELGSAVPVRE
201: TPETLRALQT ALAVARPPAR EECMRIFGQD LSPGGSARAP RSVDNWAPHP HLAAQATAAS ALASKEAAAG HKAPEPPRSI DFSKPGKPGH GQAGGEERRP
301: RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYALRAVVP KISKMDKASL LSDAIAYIQE LEDRLRGGGG GGGGCSAARP DSPDVEVKAM QDEVVLRVTT
401: PLYAHPVSRV FHAIRDAELI VAASDVAVAD EAVTHTLVLR SPGPEQLTAE TVLAAMSRGM TSATPSP
101: RLHALYGGGD DEGADYALRL DRVTAAEMYF LASMYFSFPE GAGGPGHALA TARHAWATVD PAPGWYVRAS LAQSAGLRTV VFLPCKGGVL ELGSAVPVRE
201: TPETLRALQT ALAVARPPAR EECMRIFGQD LSPGGSARAP RSVDNWAPHP HLAAQATAAS ALASKEAAAG HKAPEPPRSI DFSKPGKPGH GQAGGEERRP
301: RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYALRAVVP KISKMDKASL LSDAIAYIQE LEDRLRGGGG GGGGCSAARP DSPDVEVKAM QDEVVLRVTT
401: PLYAHPVSRV FHAIRDAELI VAASDVAVAD EAVTHTLVLR SPGPEQLTAE TVLAAMSRGM TSATPSP
001: MGQKFWENQE DRAMVESTIG SEACDFFIST ASASNTALSK LVSPPSDSNL QQGLRHVVEG SDWDYALFWL ASNVNSSDGC VLIWGDGHCR VKKGASGEDY
101: SQQDEIKRRV LRKLHLSFVG SDEDHRLVKS GALTDLDMFY LASLYFSFRC DTNKYGPAGT YVSGKPLWAA DLPSCLSYYR VRSFLARSAG FQTVLSVPVN
201: SGVVELGSLR HIPEDKSVIE MVKSVFGGSD FVQAKEAPKI FGRQLSLGGA KPRSMSINFS PKTEDDTGFS LESYEVQAIG GSNQVYGYEQ GKDETLYLTD
301: EQKPRKRGRK PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLADAIT YITDMQKKIR VYETEKQIMK RRESNQITPA EVDYQQRHDD
401: AVVRLSCPLE THPVSKVIQT LRENEVMPHD SNVAITEEGV VHTFTLRPQG GCTAEQLKDK LLASLSQ
101: SQQDEIKRRV LRKLHLSFVG SDEDHRLVKS GALTDLDMFY LASLYFSFRC DTNKYGPAGT YVSGKPLWAA DLPSCLSYYR VRSFLARSAG FQTVLSVPVN
201: SGVVELGSLR HIPEDKSVIE MVKSVFGGSD FVQAKEAPKI FGRQLSLGGA KPRSMSINFS PKTEDDTGFS LESYEVQAIG GSNQVYGYEQ GKDETLYLTD
301: EQKPRKRGRK PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLADAIT YITDMQKKIR VYETEKQIMK RRESNQITPA EVDYQQRHDD
401: AVVRLSCPLE THPVSKVIQT LRENEVMPHD SNVAITEEGV VHTFTLRPQG GCTAEQLKDK LLASLSQ
Arabidopsis Description
BHLH3Transcription factor bHLH3 [Source:UniProtKB/Swiss-Prot;Acc:O23487]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.