Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37866 | Sorghum | nucleus | 80.49 | 80.05 |
| Zm00001d033413_P001 | Maize | nucleus | 52.03 | 60.38 |
| Zm00001d026009_P001 | Maize | plastid | 33.06 | 59.8 |
| Zm00001d038966_P001 | Maize | plastid | 33.06 | 59.8 |
| Zm00001d003604_P001 | Maize | nucleus | 50.95 | 55.95 |
| TraesCS4D01G306400.1 | Wheat | nucleus | 23.58 | 52.73 |
| HORVU3Hr1G002620.1 | Barley | plastid | 31.71 | 50.87 |
| Zm00001d025462_P001 | Maize | nucleus | 44.44 | 49.7 |
| TraesCS4D01G018700.1 | Wheat | nucleus | 48.51 | 49.58 |
| TraesCS4B01G021500.1 | Wheat | nucleus | 47.43 | 49.02 |
| HORVU4Hr1G003210.1 | Barley | nucleus | 48.24 | 48.77 |
| TraesCS4D01G019200.1 | Wheat | nucleus | 46.34 | 47.5 |
| TraesCS4B01G020900.1 | Wheat | nucleus | 46.88 | 46.76 |
| TraesCS4A01G408700.1 | Wheat | nucleus | 34.15 | 46.67 |
| TraesCS4B01G021100.1 | Wheat | nucleus | 45.8 | 46.56 |
| TraesCS4A01G292800.1 | Wheat | nucleus | 46.07 | 46.2 |
| TraesCS4D01G306300.1 | Wheat | nucleus | 42.28 | 45.75 |
| TraesCS4B01G308200.1 | Wheat | nucleus | 44.17 | 45.28 |
| TraesCS4B01G021200.1 | Wheat | nucleus | 44.99 | 44.99 |
| Zm00001d033407_P001 | Maize | nucleus | 43.36 | 44.94 |
| TraesCS3D01G014900.1 | Wheat | nucleus | 40.38 | 44.35 |
| TraesCS4B01G308100.1 | Wheat | nucleus | 41.46 | 44.09 |
| TraesCS3A01G019100.1 | Wheat | nucleus | 37.94 | 44.03 |
| TraesCS3A01G019000.1 | Wheat | nucleus | 37.94 | 43.89 |
| TraesCS3B01G029800.1 | Wheat | nucleus | 38.75 | 43.6 |
| TraesCS4B01G308300.1 | Wheat | nucleus | 42.82 | 43.41 |
| Zm00001d024781_P001 | Maize | nucleus | 40.92 | 42.78 |
| HORVU4Hr1G078910.2 | Barley | nucleus | 42.55 | 42.32 |
| HORVU4Hr1G078880.2 | Barley | nucleus | 41.73 | 42.19 |
| TraesCS4A01G408800.1 | Wheat | nucleus | 43.9 | 42.19 |
| Zm00001d031167_P002 | Maize | nucleus | 39.57 | 37.15 |
| Zm00001d033848_P004 | Maize | nucleus | 29.27 | 29.67 |
| Zm00001d013370_P001 | Maize | plastid | 29.27 | 28.95 |
| Zm00001d028315_P001 | Maize | cytosol | 10.57 | 28.89 |
| Zm00001d028312_P001 | Maize | nucleus | 21.41 | 24.69 |
| Zm00001d030232_P001 | Maize | nucleus | 20.05 | 23.12 |
| Zm00001d028314_P001 | Maize | nucleus | 10.84 | 21.39 |
| Zm00001d052728_P001 | Maize | nucleus | 13.82 | 18.55 |
| Zm00001d031717_P001 | Maize | nucleus | 12.74 | 18.5 |
| Zm00001d006150_P001 | Maize | nucleus | 13.28 | 16.84 |
| Zm00001d021164_P001 | Maize | nucleus | 13.01 | 16.55 |
| Zm00001d043706_P001 | Maize | nucleus | 12.47 | 9.85 |
| Zm00001d039271_P001 | Maize | nucleus | 16.26 | 9.74 |
| Zm00001d009013_P001 | Maize | nucleus | 15.99 | 9.66 |
| Zm00001d030028_P001 | Maize | nucleus | 17.34 | 9.08 |
| Zm00001d000236_P001 | Maize | nucleus, plastid | 13.55 | 8.98 |
| Zm00001d047017_P001 | Maize | nucleus | 16.26 | 8.53 |
| Zm00001d026147_P002 | Maize | nucleus | 13.82 | 8.28 |
| Zm00001d019170_P001 | Maize | nucleus | 12.47 | 6.82 |
| Zm00001d007536_P001 | Maize | plastid | 9.49 | 5.77 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | UniProt:A0A1D6KYW0 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | ProteinID:ONM07570.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF74 | SMART:SM00353 | SUPFAM:SSF47459 |
| TMHMM:TMhelix | UniParc:UPI0008442E7B | EnsemblPlantsGene:Zm00001d033412 | EnsemblPlants:Zm00001d033412_P001 | EnsemblPlants:Zm00001d033412_T001 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
bHLH-transcription factor 71Transcription factor bHLH28
Coordinates
chr1:-:262342434..262343681
Molecular Weight (calculated)
39615.0 Da
IEP (calculated)
7.305
GRAVY (calculated)
-0.233
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSSLFLQW AMSTLRHEQQ PAAAVNDDCS SEATFPSLQA LREASHAAEM VQELIGEAPA NSWSSGDTTD GSIGGNSNSV PGPAAAAMEH DVWPAASSKT
101: SPARRALSRS SSDTNPPVSW NFSAAASAQL AGSADGMLPE FAPKSALPPD QAYGSPRARR AGLKSLAGSM SSAAYAQDHI IAERKRREKI NQRFIELSTV
201: IPGLKKMDKA TILSDATKYV KELHGKLKDL EAGGSNRRKS IETVVLVKRP CLHAAPAPDD DASPLSASSG TPAETKTQLP EIEARFAENS VMVRIHCEDG
301: KGVAVKVLAE VEELHLSIIH ANVLPFVEGT LIITITAKAS FFLLTSLFTR KRNLFWYIPL PTVRKVLNF
101: SPARRALSRS SSDTNPPVSW NFSAAASAQL AGSADGMLPE FAPKSALPPD QAYGSPRARR AGLKSLAGSM SSAAYAQDHI IAERKRREKI NQRFIELSTV
201: IPGLKKMDKA TILSDATKYV KELHGKLKDL EAGGSNRRKS IETVVLVKRP CLHAAPAPDD DASPLSASSG TPAETKTQLP EIEARFAENS VMVRIHCEDG
301: KGVAVKVLAE VEELHLSIIH ANVLPFVEGT LIITITAKAS FFLLTSLFTR KRNLFWYIPL PTVRKVLNF
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.