Factsheet for Zm00001d025462_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003604_P001	Maize	nucleus	72.73	71.43
EES10849	Sorghum	nucleus	74.24	71.01
Zm00001d038966_P001	Maize	plastid	43.64	70.59
Zm00001d026009_P001	Maize	plastid	43.03	69.61
TraesCS4D01G306400.1	Wheat	nucleus	23.64	47.27
Zm00001d033413_P001	Maize	nucleus	45.45	47.17
TraesCS3B01G029800.1	Wheat	nucleus	44.55	44.82
HORVU3Hr1G002620.1	Barley	plastid	31.21	44.78
Zm00001d033412_P001	Maize	nucleus	49.7	44.44
TraesCS4B01G021500.1	Wheat	nucleus	47.58	43.98
TraesCS4D01G019200.1	Wheat	nucleus	47.88	43.89
TraesCS3D01G014900.1	Wheat	nucleus	44.24	43.45
HORVU4Hr1G003210.1	Barley	nucleus	47.88	43.29
TraesCS4D01G018700.1	Wheat	nucleus	46.97	42.94
TraesCS4A01G292800.1	Wheat	nucleus	47.88	42.93
TraesCS4B01G020900.1	Wheat	nucleus	47.58	42.43
TraesCS3A01G019000.1	Wheat	nucleus	40.91	42.32
TraesCS4B01G021200.1	Wheat	nucleus	47.27	42.28
TraesCS4D01G306300.1	Wheat	nucleus	43.33	41.94
TraesCS4B01G021100.1	Wheat	nucleus	45.76	41.6
TraesCS4B01G308200.1	Wheat	nucleus	44.85	41.11
TraesCS4B01G308100.1	Wheat	nucleus	42.73	40.63
Zm00001d033407_P001	Maize	nucleus	43.64	40.45
HORVU4Hr1G078880.2	Barley	nucleus	44.55	40.27
TraesCS4A01G408700.1	Wheat	nucleus	32.73	40.0
TraesCS3A01G019100.1	Wheat	nucleus	38.18	39.62
TraesCS4B01G308300.1	Wheat	nucleus	43.64	39.56
TraesCS4A01G408800.1	Wheat	nucleus	44.85	38.54
Zm00001d024781_P001	Maize	nucleus	40.0	37.39
HORVU4Hr1G078910.2	Barley	nucleus	41.21	36.66
Zm00001d031167_P002	Maize	nucleus	39.39	33.08
Zm00001d033848_P004	Maize	nucleus	27.88	25.27
Zm00001d013370_P001	Maize	plastid	27.27	24.13
Zm00001d028315_P001	Maize	cytosol	8.48	20.74
Zm00001d028312_P001	Maize	nucleus	19.09	19.69
Zm00001d028314_P001	Maize	nucleus	10.61	18.72
Zm00001d030232_P001	Maize	nucleus	17.58	18.12
Zm00001d031717_P001	Maize	nucleus	12.73	16.54
Zm00001d052728_P001	Maize	nucleus	13.64	16.36
Zm00001d006150_P001	Maize	nucleus	13.94	15.81
Zm00001d021164_P001	Maize	nucleus	13.64	15.52
Zm00001d043706_P001	Maize	nucleus	16.06	11.35
Zm00001d009013_P001	Maize	nucleus	17.58	9.49
Zm00001d039271_P001	Maize	nucleus	17.58	9.42
Zm00001d030028_P001	Maize	nucleus	17.58	8.23
Zm00001d026147_P002	Maize	nucleus	15.15	8.12
Zm00001d000236_P001	Maize	nucleus, plastid	13.64	8.08
Zm00001d047017_P001	Maize	nucleus	16.97	7.97
Zm00001d019170_P001	Maize	nucleus	13.03	6.38
Zm00001d007536_P001	Maize	plastid	10.0	5.44

Protein Annotations

MapMan:15.5.32	MapMan:25.4.1.7	Gene3D:4.10.280.10	UniProt:A0A1D6J7A3	ProteinID:AQK43802.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR23042	PANTHER:PTHR23042:SF74
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI00084426AD	EnsemblPlantsGene:Zm00001d025462	EnsemblPlants:Zm00001d025462_P001	EnsemblPlants:Zm00001d025462_T001
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

bHLH-transcription factor 102Putative HLH DNA-binding domain superfamily protein

Coordinates

chr10:+:119451223..119452565

Molecular Weight (calculated)

34947.3 Da

IEP (calculated)

5.702

GRAVY (calculated)

-0.288

Length

330 amino acids

Sequence
(BLAST)

001: MDMEDSGQFM QWAMATLQHD EDQAVDYPID DGRGGATFPS LRALREASSQ AAEMIQEPLA AANSRCGGDG GTAAAGNNIS GTAPRRSSSG SAVIQPLRWN
101: FGAGAAAPPG RDGVPVPAEA AATGSLLPDL AYGPPPTRKQ AVLKSVGSIY AQDHIIAERK RREKINQRFI ELSTVIPGLK KMDKATILSD ATRYVRDLQE
201: KIKAHEDGGG SNDRGIVESW VLVKKPCVAA PDEDAGSSPS WDSSGTTAPS PATNPLPEIE ARFLNKNVTV RIHCVGVKGV VVRVLAELEE LHLSIIHANV
301: DEGFTVTAEE IVGRLKTSAC INAPAKPLLQ

Best Arabidopsis Sequence Match ( AT4G37850.1 )
(BLAST)

001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI

Arabidopsis Description

BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.