Factsheet for Zm00001d047017_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002029_P003
Zm00001d005726_P001
Zm00001d005813_P002
Zm00001d006860_P001
Zm00001d013855_P002
Zm00001d020409_P002
Zm00001d020614_P001
Zm00001d021924_P001
Zm00001d022139_P001
Zm00001d026477_P002
Zm00001d029448_P001
Zm00001d032009_P001
Zm00001d033972_P002
Zm00001d044708_P001
Zm00001d046270_P001
Zm00001d050365_P006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32640.1	Zm00001d005813_P002	AT1G19180.1	18547396
AT1G32640.1	Zm00001d006860_P001	AT1G19180.1	18547396
AT1G32640.1	Zm00001d020614_P001	AT1G19180.1	18547396
AT1G32640.1	Zm00001d022139_P001	AT1G19180.1	18547396
AT1G32640.1	Zm00001d029448_P001	AT1G19180.1	18547396
AT1G32640.1	Zm00001d005726_P001	AT1G48500.1	19309455
AT1G32640.1	Zm00001d020409_P002	AT1G48500.1	19309455
AT1G32640.1	Zm00001d032009_P001	AT1G48500.1	19309455
AT1G32640.1	Zm00001d050365_P006	AT1G48500.1	19309455
AT1G32640.1	Zm00001d005726_P001	AT3G17860.1	17637675
AT1G32640.1	Zm00001d020409_P002	AT3G17860.1	17637675
AT1G32640.1	Zm00001d032009_P001	AT3G17860.1	17637675
AT1G32640.1	Zm00001d050365_P006	AT3G17860.1	17637675
AT1G32640.1	Zm00001d002029_P003	AT3G43440.1	19309455
AT1G32640.1	Zm00001d013855_P002	AT3G43440.1	19309455
AT1G32640.1	Zm00001d021924_P001	AT3G43440.1	19309455
AT1G32640.1	Zm00001d026477_P002	AT3G43440.1	19309455
AT1G32640.1	Zm00001d033972_P002	AT3G43440.1	19309455
AT1G32640.1	Zm00001d044708_P001	AT3G43440.1	19309455
AT1G32640.1	Zm00001d046270_P001	AT3G43440.1	19309455

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030028_P001	Maize	nucleus	89.62	89.36
KXG39194	Sorghum	nucleus	89.76	89.25
Os10t0575000-01	Rice	nucleus	79.94	80.4
HORVU1Hr1G050560.1	Barley	nucleus	78.09	80.26
TraesCS1B01G208000.1	Wheat	nucleus	78.66	79.8
TraesCS1D01G196900.1	Wheat	nucleus	78.52	79.42
TraesCS1A01G193200.1	Wheat	nucleus	74.96	76.05
Bra017527.1-P	Field mustard	nucleus	19.2	59.73
GSMUA_Achr7P04720_001	Banana	nucleus	37.7	56.5
GSMUA_Achr3P00370_001	Banana	plastid	35.14	56.14
VIT_02s0012g01320.t01	Wine grape	nucleus	52.2	55.35
Bra013263.1-P	Field mustard	nucleus	20.63	53.51
KRH75613	Soybean	nucleus	47.51	52.43
Solyc08g005050.2.1	Tomato	nucleus	34.57	52.37
PGSC0003DMT400002963	Potato	nucleus	43.95	51.67
KRH74418	Soybean	nucleus	46.94	51.4
KRH45440	Soybean	nucleus	47.08	50.61
Bra010178.1-P	Field mustard	nucleus	43.1	50.5
Solyc08g076930.1.1	Tomato	nucleus	48.79	49.78
AT4G17880.1	Thale cress	nucleus	41.54	49.58
PGSC0003DMT400045204	Potato	nucleus	48.65	49.28
AT1G32640.1	Thale cress	nucleus	43.67	49.28
Bra024998.1-P	Field mustard	nucleus	39.54	47.93
AT5G46760.1	Thale cress	nucleus	39.4	46.79
KRH39540	Soybean	nucleus	48.65	46.79
Bra013264.1-P	Field mustard	nucleus	19.35	45.79
Bra017523.1-P	Field mustard	nucleus	32.57	45.17
Bra017520.1-P	Field mustard	nucleus	31.58	44.58
Bra024992.1-P	Field mustard	nucleus	16.36	42.44
GSMUA_AchrUn_...	Banana	cytosol	31.15	42.36
AT5G46830.1	Thale cress	nucleus	30.44	41.88
VIT_02s0025g02610.t01	Wine grape	nucleus	21.05	41.0
Bra024993.1-P	Field mustard	nucleus	21.91	40.85
VIT_15s0048g02820.t01	Wine grape	nucleus	26.32	37.22
PGSC0003DMT400014089	Potato	nucleus	20.2	36.98
PGSC0003DMT400014097	Potato	nucleus	23.9	36.76
KRH47834	Soybean	nucleus	24.18	36.64
Solyc10g009290.1.1	Tomato	nucleus	23.19	36.14
PGSC0003DMT400047220	Potato	nucleus	23.19	36.06
KRH06400	Soybean	nucleus	23.9	36.05
PGSC0003DMT400028057	Potato	nucleus	19.91	35.99
Solyc10g009270.2.1	Tomato	nucleus	20.06	35.88
Solyc01g096370.2.1	Tomato	nucleus	22.9	35.78
Solyc08g083170.1.1	Tomato	extracellular	19.63	35.66
Zm00001d031717_P001	Maize	nucleus	12.66	35.04
PGSC0003DMT400031899	Potato	plastid	21.34	34.8
Solyc08g008600.2.1	Tomato	nucleus	22.05	34.29
PGSC0003DMT400015017	Potato	nucleus	22.19	34.21
Zm00001d043706_P001	Maize	nucleus	22.48	33.83
Zm00001d052728_P001	Maize	nucleus	13.09	33.45
Zm00001d006150_P001	Maize	nucleus	13.37	32.3
Zm00001d021164_P001	Maize	nucleus	13.23	32.07
AT4G00870.1	Thale cress	nucleus, plastid	18.92	31.44
Zm00001d009013_P001	Maize	nucleus	24.89	28.64
Zm00001d039271_P001	Maize	nucleus	25.04	28.57
Zm00001d026009_P001	Maize	plastid	6.69	23.04
Zm00001d038966_P001	Maize	plastid	6.69	23.04
Zm00001d007536_P001	Maize	plastid	17.78	20.59
Zm00001d026147_P002	Maize	nucleus	17.78	20.29
Zm00001d000236_P001	Maize	nucleus, plastid	15.36	19.39
Zm00001d028315_P001	Maize	cytosol	3.7	19.26
Zm00001d033413_P001	Maize	nucleus	8.53	18.87
Zm00001d013370_P001	Maize	plastid	9.82	18.5
Zm00001d003604_P001	Maize	nucleus	8.82	18.45
Zm00001d033848_P004	Maize	nucleus	9.53	18.41
Zm00001d019170_P001	Maize	nucleus	17.21	17.95
Zm00001d028312_P001	Maize	nucleus	8.11	17.81
Zm00001d033407_P001	Maize	nucleus	8.82	17.42
Zm00001d024781_P001	Maize	nucleus	8.68	17.28
Zm00001d030232_P001	Maize	nucleus	7.82	17.19
Zm00001d028314_P001	Maize	nucleus	4.55	17.11
Zm00001d025462_P001	Maize	nucleus	7.97	16.97
Zm00001d033412_P001	Maize	nucleus	8.53	16.26
Zm00001d031167_P002	Maize	nucleus	8.68	15.52

Protein Annotations

EntrezGene:103638892	MapMan:15.5.32	Gene3D:4.10.280.10	ProteinID:AQL05369.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	UniProt:K7VC27	InterPro:MYC/MYB_N	PFAM:PF00010	PFAM:PF14215
PFscan:PS50888	PANTHER:PTHR11514	PANTHER:PTHR11514:SF43	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI00022208A9
EnsemblPlantsGene:Zm00001d047017	EnsemblPlants:Zm00001d047017_P001	EnsemblPlants:Zm00001d047017_T001	InterPro:bHLH_dom	SEG:seg	:

Description

bHLH-transcription factor 91Putative HLH DNA-binding domain superfamily protein

Coordinates

chr9:-:115421894..115424005

Molecular Weight (calculated)

75335.2 Da

IEP (calculated)

6.434

GRAVY (calculated)

-0.532

Length

703 amino acids

Sequence
(BLAST)

001: MNLWTDDNAS MMEAFMASAD LPAYPWGAPA GGGNPPPPQM PPAMAMAPGF NQDTLQQRLQ AMIEGSRETW TYAIFWQSSL DAATGASLLG WGDGYYKGCD
101: DDKRRHRPPL TPAAQAEQEH RKRVLRELNS LISGGASAAP APAPDEAVEE EVTDTEWFFL VSMTQSFLNG SGLPGQALFA GHHTWIAAGL SSAPCDRARQ
201: AYNFGLRTMV CFPVGTGVLE LGSTDVVFQT AETMAKIRSL FGGGPGGGSW PPVQPQAAPQ QQHAAEADQA AETDPSVLWL ADAPVVDIKD SYSHPSAAEI
301: SVSKPPPPPP PPQIHFENGS TSTLTENPSP SVHAPPAPPA PPQRQQQNQG PFRRELNFSD FASNPSLAAA PPFFKPESGE ILSFGVDSNA QRNPSPAPPA
401: SLTTAPGSLF SQSQHTATAA ANDAKNNNNN NKRSMEATSL ASNTNHHPAA AANEGMLSFS SAPTARPSAG TGAPAKSESD HSDLDASVRE VESSRVVAPP
501: PEAEKRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNVS KMDKASLLGD AISYINELRG KLTSLESDRE TLQAQVEALK KERDARPHPH
601: PAAGLGGHDA GGPRCHAVEI DAKILGLEAM IRVQCHKRNH PSARLMTALR ELDLDVYHAS VSVVKDLMIQ QVAVKMASRM YSQDQLSAAL YSRLAEPGSV
701: MGR

Best Arabidopsis Sequence Match ( AT1G32640.1 )
(BLAST)

001: MTDYRLQPTM NLWTTDDNAS MMEAFMSSSD ISTLWPPAST TTTTATTETT PTPAMEIPAQ AGFNQETLQQ RLQALIEGTH EGWTYAIFWQ PSYDFSGASV
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG

Arabidopsis Description

MYC2ZBF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7C3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.