Factsheet for Os10t0575000-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0402800-01
Os04t0653000-01
Os07t0615200-01
Os08t0428400-01
Os09t0439200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32640.1	Os03t0402800-01	AT1G19180.1	18547396
AT1G32640.1	Os07t0615200-01	AT1G19180.1	18547396
AT1G32640.1	Os09t0439200-01	AT1G19180.1	18547396
AT1G32640.1	Os08t0428400-01	AT1G48500.1	19309455
AT1G32640.1	Os08t0428400-01	AT3G17860.1	17637675
AT1G32640.1	Os04t0653000-01	AT3G43440.1	19309455

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G050560.1	Barley	nucleus	81.69	83.48
TraesCS1B01G208000.1	Wheat	nucleus	82.4	83.12
TraesCS1D01G196900.1	Wheat	nucleus	82.26	82.73
KXG39194	Sorghum	nucleus	82.69	81.75
Zm00001d030028_P001	Maize	nucleus	82.12	81.42
Zm00001d047017_P001	Maize	nucleus	80.4	79.94
TraesCS1A01G193200.1	Wheat	nucleus	77.97	78.64
Bra017527.1-P	Field mustard	nucleus	19.74	61.06
GSMUA_Achr7P04720_001	Banana	nucleus	39.48	58.85
VIT_02s0012g01320.t01	Wine grape	nucleus	52.79	55.66
GSMUA_Achr3P00370_001	Banana	plastid	34.76	55.23
Bra013263.1-P	Field mustard	nucleus	21.03	54.24
Solyc08g005050.2.1	Tomato	nucleus	35.48	53.45
PGSC0003DMT400002963	Potato	nucleus	45.21	52.84
KRH75613	Soybean	nucleus	47.93	52.59
KRH74418	Soybean	nucleus	47.07	51.25
Bra010178.1-P	Field mustard	nucleus	43.78	51.0
Solyc08g076930.1.1	Tomato	nucleus	50.07	50.8
KRH45440	Soybean	nucleus	47.5	50.76
PGSC0003DMT400045204	Potato	nucleus	49.79	50.14
AT1G32640.1	Thale cress	nucleus	44.64	50.08
AT4G17880.1	Thale cress	nucleus	41.2	48.9
Bra024998.1-P	Field mustard	nucleus	39.2	47.24
KRH39540	Soybean	nucleus	49.21	47.06
AT5G46760.1	Thale cress	nucleus	39.06	46.11
Bra017523.1-P	Field mustard	nucleus	32.48	44.77
Bra017520.1-P	Field mustard	nucleus	31.62	44.38
GSMUA_AchrUn_...	Banana	cytosol	32.33	43.71
Bra013264.1-P	Field mustard	nucleus	18.03	42.42
AT5G46830.1	Thale cress	nucleus	30.76	42.07
Bra024992.1-P	Field mustard	nucleus	16.31	42.07
VIT_02s0025g02610.t01	Wine grape	nucleus	21.03	40.72
Bra024993.1-P	Field mustard	nucleus	21.6	40.05
Solyc10g009290.1.1	Tomato	nucleus	24.46	37.92
PGSC0003DMT400014097	Potato	nucleus	24.75	37.86
VIT_15s0048g02820.t01	Wine grape	nucleus	26.47	37.22
PGSC0003DMT400014089	Potato	nucleus	20.17	36.72
PGSC0003DMT400047220	Potato	nucleus	23.32	36.06
Solyc01g096370.2.1	Tomato	nucleus	23.18	36.0
PGSC0003DMT400028057	Potato	nucleus	19.89	35.73
Solyc08g083170.1.1	Tomato	extracellular	19.74	35.66
Os09t0519100-00	Rice	nucleus	13.45	35.61
Solyc10g009270.2.1	Tomato	nucleus	19.89	35.37
Os01t0705700-01	Rice	nucleus	23.18	35.22
KRH47834	Soybean	nucleus	23.32	35.13
PGSC0003DMT400031899	Potato	plastid	21.46	34.8
KRH06400	Soybean	nucleus	23.18	34.76
Solyc08g008600.2.1	Tomato	nucleus	22.03	34.07
PGSC0003DMT400015017	Potato	nucleus	22.17	33.99
AT4G00870.1	Thale cress	nucleus, plastid	19.31	31.91
Os08t0543700-00	Rice	nucleus, peroxisome, plastid	11.44	30.42
Os01t0235700-01	Rice	nucleus	24.03	27.23
Os04t0557500-00	Rice	mitochondrion, plasma membrane	6.44	25.0
Os01t0577300-00	Rice	cytosol	4.29	24.59
Os04t0557200-01	Rice	cytosol, nucleus, peroxisome	17.17	21.47
Os04t0557800-00	Rice	mitochondrion	17.6	21.43
Os12t0632600-00	Rice	nucleus	10.16	20.17
Os03t0725800-01	Rice	nucleus	10.01	19.5
Os03t0229100-00	Rice	plastid	7.87	19.23
Os03t0671800-01	Rice	nucleus	10.3	18.7
Os01t0576100-00	Rice	nucleus	7.73	17.2
Os07t0211500-00	Rice	nucleus	11.16	16.32
Os10t0104300-00	Rice	nucleus	7.44	15.9
Os11t0258700-00	Rice	mitochondrion	10.87	15.73
Os03t0671000-00	Rice	mitochondrion	2.72	7.48

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	ProteinID:AAK00453.1	ProteinID:ABB48017.1	EMBL:AY536428	ProteinID:BAF27315.1
ProteinID:BAT12190.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:MYC/MYB_N	EnsemblPlantsGene:Os10g0575000
EnsemblPlants:Os10t0575000-01	PFAM:PF00010	PFAM:PF14215	PFscan:PS50888	PANTHER:PTHR11514	PANTHER:PTHR11514:SF43
UniProt:Q336P5	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000034EA96	InterPro:bHLH_dom	SEG:seg

Description

basic helix-loop-helix protein 009JAZ-interacting transcription factor, Positive regulator of jasmonate (JA) signaling pathway, Bacterial blight resistance, Spikelet development (Os10t0575000-01)

Coordinates

chr10:+:22857127..22859748

Molecular Weight (calculated)

75107.7 Da

IEP (calculated)

6.663

GRAVY (calculated)

-0.551

Length

699 amino acids

Sequence
(BLAST)

001: MNLWTDDNAS MMEAFMASAD LPAFPWGAAS TPPPPPPPPH HHHQQQQQQV LPPPAAAPAA AAFNQDTLQQ RLQSIIEGSR ETWTYAIFWQ SSIDVSTGAS
101: LLGWGDGYYK GCDDDKRKQR SSTPAAAAEQ EHRKRVLREL NSLIAGAGAA PDEAVEEEVT DTEWFFLVSM TQSFPNGLGL PGQALFAAQP TWIATGLSSA
201: PCDRARQAYT FGLRTMVCLP LATGVLELGS TDVIFQTGDS IPRIRALFNL SAAAASSWPP HPDAASADPS VLWLADAPPM DMKDSISAAD ISVSKPPPPP
301: PHQIQHFENG STSTLTENPS PSVHAPTPSQ PAAPPQRQQQ QQQSSQAQQG PFRRELNFSD FASNGGAAAP PFFKPETGEI LNFGNDSSSG RRNPSPAPPA
401: ATASLTTAPG SLFSQHTPTL TAAANDAKSN NQKRSMEATS RASNTNNHPA ATANEGMLSF SSAPTTRPST GTGAPAKSES DHSDLEASVR EVESSRVVAP
501: PPEAEKRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF YALRAVVPNV SKMDKASLLG DAISYINELR GKLTALETDK ETLQSQMESL KKERDARPPA
601: PSGGGGDGGA RCHAVEIEAK ILGLEAMIRV QCHKRNHPAA RLMTALRELD LDVYHASVSV VKDLMIQQVA VKMASRVYSQ DQLNAALYTR IAEPGTAAR

Best Arabidopsis Sequence Match ( AT1G32640.1 )
(BLAST)

001: MTDYRLQPTM NLWTTDDNAS MMEAFMSSSD ISTLWPPAST TTTTATTETT PTPAMEIPAQ AGFNQETLQQ RLQALIEGTH EGWTYAIFWQ PSYDFSGASV
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG

Arabidopsis Description

MYC2ZBF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7C3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.