Factsheet for Os03t0402800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 3
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0235700-01
Os01t0853400-01
Os03t0265500-01
Os03t0402800-01
Os05t0449500-01
Os07t0615200-01
Os08t0428400-01
Os08t0543700-00
Os09t0439200-01
Os09t0519100-00
Os10t0575000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G19180.1	Os01t0235700-01	AT1G01260.1	21798944
AT1G19180.1	Os03t0402800-01	AT1G19180.1	19309455
AT1G19180.1	Os07t0615200-01	AT1G19180.1	19309455
AT1G19180.1	Os09t0439200-01	AT1G19180.1	19309455
AT1G19180.1	Os03t0402800-01	AT1G19180.1	21798944
AT1G19180.1	Os07t0615200-01	AT1G19180.1	21798944
AT1G19180.1	Os09t0439200-01	AT1G19180.1	21798944
AT1G19180.1	Os08t0543700-00	AT1G32640.1	18547396
AT1G19180.1	Os09t0519100-00	AT1G32640.1	18547396
AT1G19180.1	Os10t0575000-01	AT1G32640.1	18547396
AT1G19180.1	Os08t0543700-00	AT1G32640.1	19309455
AT1G19180.1	Os09t0519100-00	AT1G32640.1	19309455
AT1G19180.1	Os10t0575000-01	AT1G32640.1	19309455
AT1G19180.1	Os08t0428400-01	AT1G48500.1	19309455
AT1G19180.1	Os01t0853400-01	AT2G39940.1	17637677
AT1G19180.1	Os03t0265500-01	AT2G39940.1	17637677
AT1G19180.1	Os05t0449500-01	AT2G39940.1	17637677
AT1G19180.1	Os01t0853400-01	AT2G39940.1	18547396
AT1G19180.1	Os03t0265500-01	AT2G39940.1	18547396
AT1G19180.1	Os05t0449500-01	AT2G39940.1	18547396
AT1G19180.1	Os08t0428400-01	AT3G17860.1	19309455
AT1G74950.1	Os08t0543700-00	AT1G32640.1	19309455
AT1G74950.1	Os09t0519100-00	AT1G32640.1	19309455
AT1G74950.1	Os10t0575000-01	AT1G32640.1	19309455
AT1G74950.1	Os01t0853400-01	AT2G39940.1	18547396
AT1G74950.1	Os03t0265500-01	AT2G39940.1	18547396
AT1G74950.1	Os05t0449500-01	AT2G39940.1	18547396
AT1G74950.1	Os08t0428400-01	AT3G17860.1	19309455

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029448_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	60.53	60.53
EER92157	Sorghum	plastid	54.39	54.39
Os07t0615200-01	Rice	mitochondrion	48.25	45.08
GSMUA_Achr11P...	Banana	cytosol	39.04	38.36
GSMUA_Achr3P02140_001	Banana	mitochondrion	34.65	37.8
GSMUA_Achr2P21770_001	Banana	mitochondrion	35.53	36.65
CDX68156	Canola	cytosol	25.88	32.6
GSMUA_Achr8P16780_001	Banana	cytosol	35.96	32.41
Solyc07g042170.2.1	Tomato	cytosol	30.7	32.41
PGSC0003DMT400075155	Potato	nucleus	29.39	31.16
CDX73127	Canola	cytosol	32.46	30.2
Os09t0439200-01	Rice	plastid	30.26	29.74
Bra003778.1-P	Field mustard	cytosol	28.95	29.73
CDY46022	Canola	nucleus	30.7	29.17
CDX85865	Canola	cytosol	28.51	29.02
CDY45408	Canola	cytosol	31.14	28.98
Bra008172.1-P	Field mustard	nucleus	30.26	28.75
Bra015880.1-P	Field mustard	cytosol	30.7	28.57
Bra025713.1-P	Field mustard	plastid	31.58	28.35
VIT_11s0016g00710.t01	Wine grape	cytosol, plastid	32.89	27.99
CDY41023	Canola	plastid	31.14	27.95
CDY26697	Canola	plastid	30.7	27.67
CDX73289	Canola	cytosol	22.81	27.66
PGSC0003DMT400007592	Potato	nucleus	30.7	27.56
CDY37269	Canola	nucleus	28.95	27.5
Solyc12g009220.1.1	Tomato	nucleus	30.26	27.38
AT1G19180.1	Thale cress	cytosol	29.39	26.48
Bra016520.1-P	Field mustard	plastid	29.39	25.87
CDX96675	Canola	plastid	28.95	25.1
CDX83781	Canola	plastid	28.95	25.0
AT1G74950.1	Thale cress	cytosol	27.19	24.9
Bra031065.1-P	Field mustard	plastid	28.95	24.18
Os04t0653000-01	Rice	cytosol, nucleus, plastid	22.81	24.07
GSMUA_Achr1P21870_001	Banana	mitochondrion	34.21	22.1
CDX81917	Canola	plastid	30.7	13.78
CDY21679	Canola	plastid	31.14	13.03

Protein Annotations

MapMan:11.7.2.1.2	MapMan:15.5.45	EntrezGene:4333065	ProteinID:AAP03360.1	ProteinID:ABF96480.1	EMBL:AK061842
EMBL:AK099557	ProteinID:BAF12236.1	ProteinID:BAS84615.1	InterPro:CCT_CS	ProteinID:EAZ27256.1	GO:GO:0003674
GO:GO:0003714	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009611	GO:GO:0009719
GO:GO:0009987	GO:GO:0031347	GO:GO:1903507	GO:GO:2000022	InterPro:IPR010399	EnsemblPlantsGene:Os03g0402800
EnsemblPlants:Os03t0402800-01	PFAM:PF06200	PFAM:PF09425	PFscan:PS51320	PANTHER:PTHR33077	PANTHER:PTHR33077:SF9
UniProt:Q84R94	SMART:SM00979	InterPro:Tify_dom	UniParc:UPI000018CD7F	RefSeq:XP_015630632.1	SEG:seg

Description

TIFY GENE 10ATify domain containing protein. (Os03t0402800-01);Similar to ZIM motif family protein, expressed. (Os03t0402800-02)

Coordinates

chr3:-:16407699..16410007

Molecular Weight (calculated)

24086.4 Da

IEP (calculated)

9.715

GRAVY (calculated)

-0.496

Length

228 amino acids

Sequence
(BLAST)

001: MASAKSGERG SSSFAMACSL LSRYVRQNGA AAGELGLGIR GEADANKGKE TMELFPQNSG FGSEAAAVKE TPDAREQEKR QLTIFYGGKV LVFDDFPAEK
101: AKDLMQMASK SSSTAQNCVL LPSSATATVA DNTKVSAVPA PASALPVAQA NAPKPVRPNA ADLPQARKAS LHRFLEKRKD RLQAKAPYQG SPSDASPVKK
201: ELQESQPWLG LGPQVAAPDL SLRQESSQ

Best Arabidopsis Sequence Match ( AT1G74950.1 )
(BLAST)

001: MSSFSAECWD FSGRKPSFSQ TCTRLSRYLK EKGSFGDLSL GMTCKPDVNG GSRQPTMMNL FPCEASGMDS SAGQEDIKPK TMFPRQSSFS SSSSSGTKED
101: VQMIKETTKS VKPESQSAPL TIFYGGRVMV FDDFSAEKAK EVIDLANKGS AKSFTCFTAE VNNNHSAYSQ KEIASSPNPV CSPAKTAAQE PIQPNPASLA
201: CELPIARRAS LHRFLEKRKD RITSKAPYQI DGSAEASSKP TNPAWLSSR

Arabidopsis Description

TIFY10BTIFY10B [Source:UniProtKB/TrEMBL;Acc:A0A178WA69]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.