Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 2
- nucleus 1
- mitochondrion 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P21770_001 | Banana | mitochondrion | 48.33 | 45.7 |
| GSMUA_Achr11P... | Banana | cytosol | 49.28 | 44.4 |
| GSMUA_Achr8P16780_001 | Banana | cytosol | 42.11 | 34.78 |
| EER92157 | Sorghum | plastid | 37.8 | 34.65 |
| Os03t0402800-01 | Rice | plastid | 37.8 | 34.65 |
| GSMUA_Achr3P10270_001 | Banana | cytosol | 37.32 | 34.51 |
| TraesCS2A01G169300.1 | Wheat | plastid | 37.32 | 33.77 |
| TraesCS2D01G176800.1 | Wheat | plastid | 35.89 | 32.47 |
| TraesCS2B01G195600.1 | Wheat | plastid | 35.89 | 32.47 |
| GSMUA_Achr9P14370_001 | Banana | cytosol | 40.19 | 31.7 |
| Zm00001d029448_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 34.45 | 31.58 |
| EER97533 | Sorghum | plastid | 35.41 | 31.49 |
| HORVU2Hr1G031310.9 | Barley | cytosol, mitochondrion, plastid | 35.41 | 30.96 |
| GSMUA_Achr10P... | Banana | cytosol | 23.45 | 30.25 |
| GSMUA_Achr6P31050_001 | Banana | cytosol | 30.62 | 30.05 |
| Zm00001d022139_P001 | Maize | plastid | 33.49 | 30.04 |
| Os07t0615200-01 | Rice | mitochondrion | 34.45 | 29.51 |
| GSMUA_Achr3P05920_001 | Banana | nucleus | 34.93 | 29.08 |
| Zm00001d006860_P001 | Maize | plastid | 36.36 | 28.57 |
| GSMUA_Achr5P05170_001 | Banana | cytosol, mitochondrion, nucleus | 32.54 | 28.22 |
| Solyc07g042170.2.1 | Tomato | cytosol | 28.71 | 27.78 |
| PGSC0003DMT400075155 | Potato | nucleus | 28.23 | 27.44 |
| GSMUA_Achr5P22110_001 | Banana | mitochondrion | 32.06 | 27.13 |
| CDX68156 | Canola | cytosol | 23.45 | 27.07 |
| VIT_11s0016g00710.t01 | Wine grape | cytosol, plastid | 34.45 | 26.87 |
| CDX85865 | Canola | cytosol | 28.71 | 26.79 |
| GSMUA_Achr7P19850_001 | Banana | cytosol | 30.62 | 26.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.1 | 26.32 |
| Solyc12g009220.1.1 | Tomato | nucleus | 31.58 | 26.19 |
| CDX73289 | Canola | cytosol | 23.45 | 26.06 |
| GSMUA_Achr7P15650_001 | Banana | plastid | 19.14 | 25.81 |
| Bra003778.1-P | Field mustard | cytosol | 27.27 | 25.68 |
| CDY46022 | Canola | nucleus | 29.19 | 25.42 |
| PGSC0003DMT400007592 | Potato | nucleus | 30.62 | 25.2 |
| Bra008172.1-P | Field mustard | nucleus | 28.71 | 25.0 |
| CDY37269 | Canola | nucleus | 28.71 | 25.0 |
| CDY26697 | Canola | plastid | 30.14 | 24.9 |
| CDY45408 | Canola | cytosol | 29.19 | 24.9 |
| Bra015880.1-P | Field mustard | cytosol | 29.19 | 24.9 |
| Bra025713.1-P | Field mustard | plastid | 30.14 | 24.8 |
| AT1G74950.1 | Thale cress | cytosol | 28.71 | 24.1 |
| CDY41023 | Canola | plastid | 29.19 | 24.02 |
| CDX96675 | Canola | plastid | 30.14 | 23.95 |
| CDX73127 | Canola | cytosol | 27.75 | 23.67 |
| Bra016520.1-P | Field mustard | plastid | 29.19 | 23.55 |
| AT1G19180.1 | Thale cress | cytosol | 28.23 | 23.32 |
| CDX83781 | Canola | plastid | 29.19 | 23.11 |
| Bra031065.1-P | Field mustard | plastid | 29.67 | 22.71 |
| GSMUA_Achr8P23800_001 | Banana | cytosol | 20.1 | 22.7 |
| GSMUA_Achr1P21870_001 | Banana | mitochondrion | 35.89 | 21.25 |
| GSMUA_Achr10P... | Banana | cytosol | 17.7 | 20.9 |
| GSMUA_Achr5P22010_001 | Banana | cytosol | 15.79 | 20.12 |
| GSMUA_Achr4P09660_001 | Banana | cytosol | 19.14 | 18.26 |
| GSMUA_Achr8P24590_001 | Banana | nucleus | 18.66 | 17.11 |
| CDX81917 | Canola | plastid | 29.67 | 12.2 |
| CDY21679 | Canola | plastid | 29.67 | 11.38 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P02140_001 | EnsemblPlants:GSMUA_Achr3T02140_001 | EnsemblPlantsGene:GSMUA_Achr3G02140_001 | InterPro:CCT_CS | InterPro:IPR010399 | InterPro:Tify_dom |
| PANTHER:PTHR33077 | PANTHER:PTHR33077:SF19 | PFAM:PF06200 | PFAM:PF09425 | PFscan:PS51320 | SEG:seg |
| SMART:SM00979 | UniParc:UPI000296F5F4 | UniProt:M0SB32 | MapMan:15.5.45 | : | : |
Description
Putative Protein TIFY 10A [Source:GMGC_GENE;Acc:GSMUA_Achr3G02140_001]
Coordinates
chr3:+:1416649..1418081
Molecular Weight (calculated)
22949.5 Da
IEP (calculated)
10.315
GRAVY (calculated)
-0.532
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARKQGKTN FAVTCNLLSQ YIKEKGRIAD LGLGMAPRPQ DATKGKSEAF RPPTTMSLLP GADVSSGEGE QEEGVFMEPF PERAGFGPSL AAVPENAREQ
101: ERAPLTIFYG GKVLVFDNFP LEKAKDLFQL ASRGNSTAQN FGNLPRTAQP NLSYLPIARK VSLQRFLEKR KDRIHSRAPY QVSSSPGMVT PVKQENRSWL
201: ALGPQEAKL
101: ERAPLTIFYG GKVLVFDNFP LEKAKDLFQL ASRGNSTAQN FGNLPRTAQP NLSYLPIARK VSLQRFLEKR KDRIHSRAPY QVSSSPGMVT PVKQENRSWL
201: ALGPQEAKL
001: MSSSMECSEF VGSRRFTGKK PSFSQTCSRL SQYLKENGSF GDLSLGMACK PDVNGTLGNS RQPTTTMSLF PCEASNMDSM VQDVKPTNLF PRQPSFSSSS
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
Arabidopsis Description
TIFY10ATIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.