Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P31050_001 | Banana | cytosol | 46.56 | 53.99 |
| GSMUA_Achr3P10270_001 | Banana | cytosol | 40.08 | 43.81 |
| GSMUA_Achr9P14370_001 | Banana | cytosol | 46.96 | 43.77 |
| GSMUA_Achr3P05920_001 | Banana | nucleus | 43.32 | 42.63 |
| GSMUA_Achr10P... | Banana | cytosol | 26.32 | 40.12 |
| GSMUA_Achr5P05170_001 | Banana | cytosol, mitochondrion, nucleus | 38.87 | 39.83 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.68 | 39.68 |
| GSMUA_Achr2P21770_001 | Banana | mitochondrion | 34.41 | 38.46 |
| EER98969 | Sorghum | cytosol | 31.58 | 35.29 |
| PGSC0003DMT400075155 | Potato | nucleus | 29.55 | 33.95 |
| Solyc07g042170.2.1 | Tomato | cytosol | 29.55 | 33.8 |
| GSMUA_Achr7P19850_001 | Banana | cytosol | 32.79 | 33.47 |
| Solyc12g009220.1.1 | Tomato | nucleus | 34.01 | 33.33 |
| Zm00001d005813_P002 | Maize | cytosol, plastid | 29.96 | 32.6 |
| AT1G74950.1 | Thale cress | cytosol | 32.79 | 32.53 |
| GSMUA_Achr8P16780_001 | Banana | cytosol | 33.2 | 32.41 |
| CDX73127 | Canola | cytosol | 31.98 | 32.24 |
| Zm00001d020614_P001 | Maize | cytosol, plastid | 28.34 | 32.11 |
| CDY37269 | Canola | nucleus | 31.17 | 32.08 |
| GSMUA_Achr3P02140_001 | Banana | mitochondrion | 27.13 | 32.06 |
| PGSC0003DMT400007592 | Potato | nucleus | 32.79 | 31.89 |
| TraesCS5B01G211000.1 | Wheat | nucleus | 29.55 | 31.74 |
| CDY46022 | Canola | nucleus | 30.77 | 31.67 |
| Bra008172.1-P | Field mustard | nucleus | 30.36 | 31.25 |
| GSMUA_Achr11P... | Banana | cytosol | 29.15 | 31.03 |
| CDY45408 | Canola | cytosol | 30.77 | 31.02 |
| Bra015880.1-P | Field mustard | cytosol | 30.77 | 31.02 |
| TraesCS5D01G219300.2 | Wheat | nucleus | 28.74 | 30.87 |
| AT1G19180.1 | Thale cress | cytosol | 31.17 | 30.43 |
| CDY26697 | Canola | plastid | 29.96 | 29.25 |
| Bra025713.1-P | Field mustard | plastid | 29.96 | 29.13 |
| Bra003778.1-P | Field mustard | cytosol | 25.91 | 28.83 |
| CDY41023 | Canola | plastid | 29.55 | 28.74 |
| CDX96675 | Canola | plastid | 29.96 | 28.14 |
| Bra031065.1-P | Field mustard | plastid | 30.77 | 27.84 |
| VIT_11s0016g00710.t01 | Wine grape | cytosol, plastid | 29.96 | 27.61 |
| Bra016520.1-P | Field mustard | plastid | 28.74 | 27.41 |
| CDX83781 | Canola | plastid | 29.15 | 27.27 |
| CDX85865 | Canola | cytosol | 24.7 | 27.23 |
| Os09t0439200-01 | Rice | plastid | 25.51 | 27.16 |
| GSMUA_Achr7P15650_001 | Banana | plastid | 16.6 | 26.45 |
| CDX68156 | Canola | cytosol | 18.62 | 25.41 |
| GSMUA_Achr1P21870_001 | Banana | mitochondrion | 36.03 | 25.21 |
| CDX73289 | Canola | cytosol | 18.62 | 24.47 |
| HORVU5Hr1G062290.6 | Barley | mitochondrion, plastid | 27.94 | 23.39 |
| TraesCS5A01G212800.1 | Wheat | plastid | 27.94 | 23.31 |
| GSMUA_Achr10P... | Banana | cytosol | 15.38 | 21.47 |
| GSMUA_Achr4P09660_001 | Banana | cytosol | 17.81 | 20.09 |
| GSMUA_Achr5P22010_001 | Banana | cytosol | 12.96 | 19.51 |
| GSMUA_Achr8P24590_001 | Banana | nucleus | 17.41 | 18.86 |
| GSMUA_Achr8P23800_001 | Banana | cytosol | 13.77 | 18.38 |
| CDX81917 | Canola | plastid | 29.15 | 14.17 |
| CDY21679 | Canola | plastid | 30.36 | 13.76 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P22110_001 | EnsemblPlants:GSMUA_Achr5T22110_001 | EnsemblPlantsGene:GSMUA_Achr5G22110_001 | InterPro:CCT_CS | InterPro:IPR010399 | InterPro:Tify_dom |
| PANTHER:PTHR33077 | PANTHER:PTHR33077:SF12 | PFAM:PF06200 | PFAM:PF09425 | PFscan:PS51320 | SMART:SM00979 |
| UniParc:UPI000296A1B8 | UniProt:M0T0N6 | MapMan:11.7.2.1.2 | MapMan:15.5.45 | : | : |
Description
Putative Protein TIFY 10B [Source:GMGC_GENE;Acc:GSMUA_Achr5G22110_001]
Coordinates
chr5:-:24231747..24233282
Molecular Weight (calculated)
26753.5 Da
IEP (calculated)
9.895
GRAVY (calculated)
-0.700
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGKRGEKTQ FSITYGLLRQ YLKEKGSFGS IGLDIMAPRP LHHQPHERYQ SPTTLSLLPG VDVSTEDHTN DGTHQTAPKS MELFPQHAAG FGSSVLPLKE
101: ESASSIKHTE KSSQLTIFYG GKVLVFDDFP ADKAIDLLQM AGKESSAAPK RGLPVPSSTN AAESSTQNGM PKPTQASASD MPIARKNSLH RFLEKRKDRI
201: STKAPYQAHG GSSAAAPPDE VKLEDGQPWL GLGRHAVKQE HSSGSSR
101: ESASSIKHTE KSSQLTIFYG GKVLVFDDFP ADKAIDLLQM AGKESSAAPK RGLPVPSSTN AAESSTQNGM PKPTQASASD MPIARKNSLH RFLEKRKDRI
201: STKAPYQAHG GSSAAAPPDE VKLEDGQPWL GLGRHAVKQE HSSGSSR
001: MSSFSAECWD FSGRKPSFSQ TCTRLSRYLK EKGSFGDLSL GMTCKPDVNG GSRQPTMMNL FPCEASGMDS SAGQEDIKPK TMFPRQSSFS SSSSSGTKED
101: VQMIKETTKS VKPESQSAPL TIFYGGRVMV FDDFSAEKAK EVIDLANKGS AKSFTCFTAE VNNNHSAYSQ KEIASSPNPV CSPAKTAAQE PIQPNPASLA
201: CELPIARRAS LHRFLEKRKD RITSKAPYQI DGSAEASSKP TNPAWLSSR
101: VQMIKETTKS VKPESQSAPL TIFYGGRVMV FDDFSAEKAK EVIDLANKGS AKSFTCFTAE VNNNHSAYSQ KEIASSPNPV CSPAKTAAQE PIQPNPASLA
201: CELPIARRAS LHRFLEKRKD RITSKAPYQI DGSAEASSKP TNPAWLSSR
Arabidopsis Description
TIFY10BTIFY10B [Source:UniProtKB/TrEMBL;Acc:A0A178WA69]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.