CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83781	Canola	plastid	95.82	95.45
Bra016520.1-P	Field mustard	plastid	90.87	92.28
CDY26697	Canola	plastid	67.3	69.96
CDY41023	Canola	plastid	66.54	68.9
CDX73289	Canola	cytosol	46.01	64.36
CDY37269	Canola	nucleus	47.91	52.5
CDY46022	Canola	nucleus	46.77	51.25
CDY45408	Canola	cytosol	46.01	49.39
CDX73127	Canola	cytosol	44.11	47.35
CDX85865	Canola	cytosol	35.36	41.52
VIT_11s0016g00710.t01	Wine grape	cytosol, plastid	42.21	41.42
CDX81917	Canola	plastid	76.81	39.76
CDX68156	Canola	cytosol	26.62	38.67
Solyc07g042170.2.1	Tomato	cytosol	31.18	37.96
PGSC0003DMT400075155	Potato	nucleus	30.42	37.21
CDY21679	Canola	plastid	73.38	35.41
GSMUA_Achr2P21770_001	Banana	mitochondrion	28.52	33.94
Solyc12g009220.1.1	Tomato	nucleus	31.94	33.33
PGSC0003DMT400007592	Potato	nucleus	31.94	33.07
GSMUA_Achr6P31050_001	Banana	cytosol	26.62	32.86
Os07t0615200-01	Rice	mitochondrion	30.42	32.79
EER97533	Sorghum	plastid	29.28	32.77
Zm00001d022139_P001	Maize	plastid	28.9	32.62
TraesCS2B01G195600.1	Wheat	plastid	28.52	32.47
HORVU2Hr1G031310.9	Barley	cytosol, mitochondrion, plastid	28.9	31.8
TraesCS2D01G176800.1	Wheat	plastid	27.76	31.6
Zm00001d029448_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	26.62	30.7
EER92157	Sorghum	plastid	26.62	30.7
TraesCS2A01G169300.1	Wheat	plastid	26.62	30.3
GSMUA_Achr9P14370_001	Banana	cytosol	30.42	30.19
GSMUA_Achr3P02140_001	Banana	mitochondrion	23.95	30.14
GSMUA_Achr5P22110_001	Banana	mitochondrion	28.14	29.96
GSMUA_Achr3P05920_001	Banana	nucleus	27.76	29.08
Os03t0402800-01	Rice	plastid	25.1	28.95
Zm00001d006860_P001	Maize	plastid	28.9	28.57
GSMUA_Achr11P...	Banana	cytosol	25.1	28.45
TraesCS5B01G211000.1	Wheat	nucleus	24.71	28.26
GSMUA_AchrUn_...	Banana	nucleus	26.24	27.94
TraesCS5D01G219300.2	Wheat	nucleus	24.33	27.83
GSMUA_Achr5P05170_001	Banana	cytosol, mitochondrion, nucleus	25.48	27.8
GSMUA_Achr7P19850_001	Banana	cytosol	25.48	27.69
GSMUA_Achr8P16780_001	Banana	cytosol	26.62	27.67
EER98969	Sorghum	cytosol	23.19	27.6
GSMUA_Achr3P10270_001	Banana	cytosol	23.19	26.99
Os09t0439200-01	Rice	plastid	23.57	26.72
Zm00001d005813_P002	Maize	cytosol, plastid	22.81	26.43
GSMUA_Achr10P...	Banana	cytosol	15.97	25.93
Zm00001d020614_P001	Maize	cytosol, plastid	20.91	25.23
CDX96772	Canola	nucleus	25.1	24.72
CDY09086	Canola	cytosol	20.15	23.98
CDY71173	Canola	nucleus	24.71	23.9
CDY16574	Canola	cytoskeleton, cytosol, nucleus	17.87	23.62
CDX92427	Canola	cytosol	17.11	22.39
GSMUA_Achr1P21870_001	Banana	mitochondrion	29.66	22.1
TraesCS5A01G212800.1	Wheat	plastid	24.71	21.96
CDY71875	Canola	cytosol	18.63	21.78
CDY48300	Canola	cytosol, mitochondrion, nucleus, vacuole	23.95	21.72
CDY03638	Canola	nucleus	22.43	21.61
HORVU5Hr1G062290.6	Barley	mitochondrion, plastid	23.95	21.36
CDX72916	Canola	nucleus	21.67	21.03
CDY26248	Canola	mitochondrion, nucleus	20.91	20.75
CDX96409	Canola	nucleus	20.91	20.07
CDX81823	Canola	plastid	24.33	19.28

Protein Annotations

EnsemblPlants:CDX96675	EnsemblPlantsGene:GSBRNA2T00102887001	InterPro:CCT_CS	InterPro:IPR010399	InterPro:Tify_dom	PANTHER:PTHR33077
PFAM:PF06200	PFAM:PF09425	PFscan:PS51320	ProteinID:CDX96675	ProteinID:CDX96675.1	SEG:seg
SMART:SM00979	UniParc:UPI0004EEB4F3	MapMan:11.7.2.1.2	MapMan:15.5.45	:	:

Description

BnaA08g22180D

Coordinates

chrLK031895:-:542956..544545

Molecular Weight (calculated)

28584.0 Da

IEP (calculated)

10.238

GRAVY (calculated)

-0.501

Length

263 amino acids

Sequence
(BLAST)

001: MSSSMECSDS AAARRFSRKP SFSLTCSRLS QYLKENGSFG DLSLGMSCKP EVNGNSRQPT TTMSLFPCEA APMETVQDVK PKNLFPRQPS FSSSSSSLPK
101: KEEVLKMTQT TTTRSVKPEP QTAPLTIFYN GEVIVFNDFS AEKAKEVMDL ASKGTANSFT GFTSTVNLPK NQTKVRTNIA PTSNQVPHLM KPAAQEPILS
201: SSAAMACELP IARRASLHRF LAKRKDRVTS KAPYQLSDPA KASSKPQTGD NNTTSWLGLA AQI

Best Arabidopsis Sequence Match ( AT1G19180.3 )
(BLAST)

001: MSSSMECSEF VGSRRFTGKK PSFSQTCSRL SQYLKENGSF GDLSLGMACK PDVNGTLGNS RQPTTTMSLF PCEASNMDSM VQDVKPTNLF PRQPSFSSSS
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI

Arabidopsis Description

TIFY10ATIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.