Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G219300.2 | Wheat | nucleus | 48.28 | 48.7 |
| TraesCS5B01G211000.1 | Wheat | nucleus | 47.84 | 48.26 |
| Zm00001d020614_P001 | Maize | cytosol, plastid | 41.81 | 44.5 |
| Zm00001d005813_P002 | Maize | cytosol, plastid | 43.1 | 44.05 |
| EER98969 | Sorghum | cytosol | 41.38 | 43.44 |
| HORVU5Hr1G062290.6 | Barley | mitochondrion, plastid | 48.28 | 37.97 |
| TraesCS5A01G212800.1 | Wheat | plastid | 46.98 | 36.82 |
| GSMUA_Achr6P31050_001 | Banana | cytosol | 28.45 | 30.99 |
| GSMUA_Achr3P10270_001 | Banana | cytosol | 29.74 | 30.53 |
| Os03t0402800-01 | Rice | plastid | 29.74 | 30.26 |
| Solyc07g042170.2.1 | Tomato | cytosol | 28.02 | 30.09 |
| GSMUA_Achr10P... | Banana | cytosol | 20.26 | 29.01 |
| GSMUA_Achr7P19850_001 | Banana | cytosol | 30.17 | 28.93 |
| PGSC0003DMT400075155 | Potato | nucleus | 26.72 | 28.84 |
| Os07t0615200-01 | Rice | mitochondrion | 30.17 | 28.69 |
| GSMUA_Achr3P05920_001 | Banana | nucleus | 28.88 | 26.69 |
| GSMUA_Achr5P05170_001 | Banana | cytosol, mitochondrion, nucleus | 27.59 | 26.56 |
| VIT_11s0016g00710.t01 | Wine grape | cytosol, plastid | 30.6 | 26.49 |
| CDY41023 | Canola | plastid | 28.88 | 26.38 |
| Bra008172.1-P | Field mustard | nucleus | 27.16 | 26.25 |
| Bra025713.1-P | Field mustard | plastid | 28.45 | 25.98 |
| CDY46022 | Canola | nucleus | 26.72 | 25.83 |
| GSMUA_Achr9P14370_001 | Banana | cytosol | 29.31 | 25.66 |
| GSMUA_Achr5P22110_001 | Banana | mitochondrion | 27.16 | 25.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.16 | 25.51 |
| CDY26697 | Canola | plastid | 27.59 | 25.3 |
| AT1G19180.1 | Thale cress | cytosol | 27.59 | 25.3 |
| Bra031065.1-P | Field mustard | plastid | 29.74 | 25.27 |
| PGSC0003DMT400007592 | Potato | nucleus | 27.16 | 24.8 |
| Solyc12g009220.1.1 | Tomato | nucleus | 26.72 | 24.6 |
| CDY37269 | Canola | nucleus | 25.43 | 24.58 |
| CDX83781 | Canola | plastid | 27.59 | 24.24 |
| Bra016520.1-P | Field mustard | plastid | 26.72 | 23.94 |
| AT1G74950.1 | Thale cress | cytosol | 25.43 | 23.69 |
| CDX73127 | Canola | cytosol | 25.0 | 23.67 |
| CDX96675 | Canola | plastid | 26.72 | 23.57 |
| CDY45408 | Canola | cytosol | 24.57 | 23.27 |
| Bra015880.1-P | Field mustard | cytosol | 24.57 | 23.27 |
| CDX73289 | Canola | cytosol | 18.1 | 22.34 |
| CDX85865 | Canola | cytosol | 21.55 | 22.32 |
| Bra003778.1-P | Field mustard | cytosol | 20.69 | 21.62 |
| CDX68156 | Canola | cytosol | 16.81 | 21.55 |
| Os04t0653000-01 | Rice | cytosol, nucleus, plastid | 18.97 | 20.37 |
| CDY21679 | Canola | plastid | 29.31 | 12.48 |
| CDX81917 | Canola | plastid | 26.29 | 12.01 |
Protein Annotations
| MapMan:15.5.45 | EntrezGene:4347164 | EMBL:AK108738 | ProteinID:BAD36082.1 | ProteinID:BAD36140.1 | ProteinID:BAF25187.1 |
| ProteinID:BAT08274.1 | InterPro:CCT_CS | ProteinID:EAZ44871.1 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009611 |
| GO:GO:0009719 | GO:GO:0009987 | GO:GO:0031347 | GO:GO:1903507 | GO:GO:2000022 | InterPro:IPR010399 |
| EnsemblPlantsGene:Os09g0439200 | EnsemblPlants:Os09t0439200-01 | PFAM:PF06200 | PFAM:PF09425 | PFscan:PS51320 | PANTHER:PTHR33077 |
| PANTHER:PTHR33077:SF12 | UniProt:Q69P94 | SMART:SM00979 | InterPro:Tify_dom | UniParc:UPI000040398F | RefSeq:XP_015610644.1 |
| SEG:seg | : | : | : | : | : |
Description
TIFY GENE 10CJasmonate ZIM-domain protein, Jasmonate-induced resistance to bacterial blight, Repressor of jasmonic acid signaling (Os09t0439200-01)
Coordinates
chr9:-:16273522..16275268
Molecular Weight (calculated)
24054.5 Da
IEP (calculated)
9.174
GRAVY (calculated)
-0.372
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRATATAT AAGKDRSSFA VTCSLLSQFL KEKKGGGGGL QGLGLGLRPA PAAPPAAGAG GAFRPPPTTM NLLSGLDAPA VEVEPNTAET AADELPLIKA
101: PADQQSDESA SEAAGEKAQQ LTIFYGGKVV VFENFPSTKV KDLLQIVSTG DGVDKNTGTA ATQSLPRPAH NSLPDLPIAR RNSLHRFLEK RKGRMNANAP
201: YQANCTAAPS KQANGDKSWL GFGQEMTIKQ EI
101: PADQQSDESA SEAAGEKAQQ LTIFYGGKVV VFENFPSTKV KDLLQIVSTG DGVDKNTGTA ATQSLPRPAH NSLPDLPIAR RNSLHRFLEK RKGRMNANAP
201: YQANCTAAPS KQANGDKSWL GFGQEMTIKQ EI
001: MSSSMECSEF VGSRRFTGKK PSFSQTCSRL SQYLKENGSF GDLSLGMACK PDVNGTLGNS RQPTTTMSLF PCEASNMDSM VQDVKPTNLF PRQPSFSSSS
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
Arabidopsis Description
TIFY10ATIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.