Factsheet for Os01t0853400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0853400-01
Os01t0935300-02
Os02t0551100-01
Os03t0197400-01
Os03t0265500-01
Os03t0402800-01
Os04t0428900-01
Os04t0432000-02
Os05t0193900-00
Os05t0449500-01
Os07t0615200-01
Os08t0119000-01
Os08t0344100-01
Os08t0428400-01
Os09t0439200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39940.1	Os03t0402800-01	AT1G19180.1	17637677
AT2G39940.1	Os07t0615200-01	AT1G19180.1	17637677
AT2G39940.1	Os09t0439200-01	AT1G19180.1	17637677
AT2G39940.1	Os03t0402800-01	AT1G19180.1	18547396
AT2G39940.1	Os07t0615200-01	AT1G19180.1	18547396
AT2G39940.1	Os09t0439200-01	AT1G19180.1	18547396
AT2G39940.1	Os03t0402800-01	AT1G74950.1	18547396
AT2G39940.1	Os07t0615200-01	AT1G74950.1	18547396
AT2G39940.1	Os09t0439200-01	AT1G74950.1	18547396
AT2G39940.1	Os01t0853400-01	AT2G39940.1	12724535
AT2G39940.1	Os03t0265500-01	AT2G39940.1	12724535
AT2G39940.1	Os05t0449500-01	AT2G39940.1	12724535
AT2G39940.1	Os08t0428400-01	AT3G17860.1	17637675
AT2G39940.1	Os08t0428400-01	AT3G17860.1	18547396
AT2G39940.1	Os08t0428400-01	AT3G17860.1	19309455
AT2G39940.1	Os01t0935300-02	AT4G02570.1	12172031
AT2G39940.1	Os05t0193900-00	AT4G02570.1	12172031
AT2G39940.1	Os01t0935300-02	AT4G02570.1	12445118
AT2G39940.1	Os05t0193900-00	AT4G02570.1	12445118
AT2G39940.1	Os01t0935300-02	AT4G02570.1	12724535
AT2G39940.1	Os05t0193900-00	AT4G02570.1	12724535
AT2G39940.1	Os04t0428900-01	AT4G14110.1	12724535
AT2G39940.1	Os02t0551100-01	AT5G08590.1	12172031
AT2G39940.1	Os04t0432000-02	AT5G08590.1	12172031
AT2G39940.1	Os02t0551100-01	AT5G08590.1	14749489
AT2G39940.1	Os04t0432000-02	AT5G08590.1	14749489
AT2G39940.1	Os08t0119000-01	AT5G14250.1	12724535
AT2G39940.1	Os03t0197400-01	AT5G42970.1	12724535
AT2G39940.1	Os08t0344100-01	AT5G63110.1	12445118

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G085210.2	Barley	cytosol	88.07	88.22
TraesCS3D01G360400.2	Wheat	cytosol	88.07	88.07
TraesCS3A01G367500.1	Wheat	cytosol	82.35	87.97
TraesCS3B01G399200.1	Wheat	cytosol	87.73	87.88
Zm00001d012338_P001	Maize	cytosol	84.87	84.73
EES01769	Sorghum	cytosol	84.54	84.4
Zm00001d042833_P001	Maize	cytosol	84.54	84.11
Os05t0449500-01	Rice	cytosol	82.52	82.24
GSMUA_Achr6P33630_001	Banana	cytosol, mitochondrion, nucleus	66.89	68.27
GSMUA_Achr5P28930_001	Banana	cytosol	63.7	67.68
GSMUA_Achr9P03690_001	Banana	cytosol	67.23	66.33
Os03t0265500-01	Rice	plasma membrane	62.69	63.33
VIT_13s0019g03380.t01	Wine grape	cytosol	61.51	61.2
KRH31107	Soybean	cytosol	58.99	59.49
KRG97777	Soybean	cytosol	58.99	59.49
Solyc05g052620.2.1	Tomato	cytosol	58.49	57.71
KRH14993	Soybean	cytosol	54.96	57.57
KRH73146	Soybean	cytosol	56.47	57.53
CDY24941	Canola	cytosol	56.47	56.95
Bra000156.1-P	Field mustard	cytosol	56.3	56.78
AT2G39940.1	Thale cress	cytosol	56.13	56.42
GSMUA_Achr8P02350_001	Banana	cytosol	16.3	56.4
CDX93223	Canola	cytosol	54.79	55.16
CDY20501	Canola	cytosol	55.46	54.82
Bra005000.1-P	Field mustard	cytosol	55.29	54.56
CDX74819	Canola	cytosol	54.96	54.5
CDY07041	Canola	cytosol	54.12	54.39
CDX93225	Canola	cytosol	54.29	54.38
CDY07040	Canola	cytosol	54.62	53.54
Bra017045.1-P	Field mustard	cytosol	54.29	53.21
Bra017044.1-P	Field mustard	cytosol	53.95	53.15
CDY60996	Canola	endoplasmic reticulum, golgi	56.13	47.51
Os03t0187500-01	Rice	cytosol	13.61	32.14
Os11t0515500-01	Rice	cytosol	29.75	31.16
Os04t0395600-01	Rice	cytosol	29.92	30.96
Os05t0150500-00	Rice	plastid	29.41	29.81
Os02t0759700-01	Rice	cytosol	31.76	29.67

Protein Annotations

Gene3D:1.20.1280.50	MapMan:11.7.2.1.1	Gene3D:3.80.10.10	EntrezGene:4324818	EMBL:AY168645	ProteinID:BAD81943.1
ProteinID:BAF06745.2	ProteinID:BAS75269.1	EMBL:DQ028826	ProteinID:EAZ14179.1	InterPro:F-box-like_dom_sf	GO:GO:0002213
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0009719	GO:GO:0009987
GO:GO:2000022	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_Cys-con_subtyp	EnsemblPlantsGene:Os01g0853400	EnsemblPlants:Os01t0853400-01
PANTHER:PTHR43944	PANTHER:PTHR43944:SF3	UniProt:Q6Y9P5	SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF81383
UniParc:UPI00001D6427	RefSeq:XP_015621119.1	:	:	:	:

Description

coronatine insensitive 1a, CORONATINE INSENSITIVE1Component of the SCF E3 ubiquitin ligase complex, Jasmonate-regulated defense responses, Promoting leaf senescence (Os01t0853400-01)

Coordinates

chr1:+:36747521..36750925

Molecular Weight (calculated)

67013.2 Da

IEP (calculated)

6.680

GRAVY (calculated)

-0.095

Length

595 amino acids

Sequence
(BLAST)

001: MGGEVPEPRR LNRALSFDDW VPDEALHLVM GHVEDPRDRE AASRVCRRWH RIDALTRKHV TVAFCYAARP ARLRERFPRL ESLSLKGKPR AAMYGLIPDD
101: WGAYAAPWID ELAAPLECLK ALHLRRMTVT DADIAALVRA RGHMLQELKL DKCIGFSTDA LRLVARSCRS LRTLFLEECH ITDKGGEWLH ELAVNNSVLV
201: TLNFYMTELK VAPADLELLA KNCKSLISLK MSECDLSDLI SFFQTANALQ DFAGGAFYEV GELTKYEKVK FPPRLCFLGL TYMGTNEMPV IFPFSMKLKK
301: LDLQYTFLTT EDHCQIIAKC PNLLILEVRN VIGDRGLEVV GDTCKKLRRL RIERGDDDPG LQEEQGGVSQ LGLTAVAVGC RELEYIAAYV SDITNGALES
401: IGTFCKNLYD FRLVLLDRER QVTDLPLDNG VCALLRNCTK LRRFALYLRP GGLSDDGLSY IGQYSGNIQY MLLGNVGESD HGLIRFAVGC TNLQKLELRS
501: CCFSERALSL AVLQMPSLRY IWVQGYRASQ TGLDLLLMAR PFWNIEFTPP SPESFNHMTE DGEPCVDSHA QVLAYYSLAG RRSDCPQWVI PLHPA

Best Arabidopsis Sequence Match ( AT2G39940.1 )
(BLAST)

001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI

Arabidopsis Description

COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.