Factsheet for GSMUA_Achr8P02350_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P21870_001
GSMUA_Achr2P06520_001
GSMUA_Achr2P20500_001
GSMUA_Achr2P21770_001
GSMUA_Achr3P02140_001
GSMUA_Achr3P05920_001
GSMUA_Achr3P10270_001
GSMUA_Achr5P05170_001
GSMUA_Achr5P05900_001
GSMUA_Achr5P22110_001
GSMUA_Achr5P28930_001
GSMUA_Achr6P31050_001
GSMUA_Achr6P33630_001
GSMUA_Achr7P12530_001
GSMUA_Achr7P19850_001
GSMUA_Achr8P02350_001
GSMUA_Achr8P16780_001
GSMUA_Achr8P31220_001
GSMUA_Achr9P03690_001
GSMUA_Achr9P14370_001
GSMUA_Achr9P15630_001
GSMUA_Achr9P17620_001
GSMUA_Achr9P19410_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39940.1	GSMUA_Achr10P...	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr11P...	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr1P21870_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr2P21770_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr3P02140_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr3P05920_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr3P10270_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr5P05170_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr5P22110_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr6P31050_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr7P19850_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr8P16780_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr9P14370_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_AchrUn_...	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr10P...	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr11P...	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr1P21870_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr2P21770_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr3P02140_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr3P05920_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr3P10270_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr5P05170_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr5P22110_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr6P31050_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr7P19850_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr8P16780_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr9P14370_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_AchrUn_...	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr10P...	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr11P...	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr1P21870_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr2P21770_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr3P02140_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr3P05920_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr3P10270_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr5P05170_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr5P22110_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr6P31050_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr7P19850_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr8P16780_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr9P14370_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_AchrUn_...	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr5P28930_001	AT2G39940.1	12724535
AT2G39940.1	GSMUA_Achr6P33630_001	AT2G39940.1	12724535
AT2G39940.1	GSMUA_Achr8P02350_001	AT2G39940.1	12724535
AT2G39940.1	GSMUA_Achr9P03690_001	AT2G39940.1	12724535
AT2G39940.1	GSMUA_Achr5P05900_001	AT3G17860.1	17637675
AT2G39940.1	GSMUA_Achr7P12530_001	AT3G17860.1	17637675
AT2G39940.1	GSMUA_Achr9P15630_001	AT3G17860.1	17637675
AT2G39940.1	GSMUA_Achr5P05900_001	AT3G17860.1	18547396
AT2G39940.1	GSMUA_Achr7P12530_001	AT3G17860.1	18547396
AT2G39940.1	GSMUA_Achr9P15630_001	AT3G17860.1	18547396
AT2G39940.1	GSMUA_Achr5P05900_001	AT3G17860.1	19309455
AT2G39940.1	GSMUA_Achr7P12530_001	AT3G17860.1	19309455
AT2G39940.1	GSMUA_Achr9P15630_001	AT3G17860.1	19309455
AT2G39940.1	GSMUA_Achr9P17620_001	AT4G02570.1	12172031
AT2G39940.1	GSMUA_Achr9P17620_001	AT4G02570.1	12445118
AT2G39940.1	GSMUA_Achr9P17620_001	AT4G02570.1	12724535
AT2G39940.1	GSMUA_Achr2P20500_001	AT4G14110.1	12724535
AT2G39940.1	GSMUA_Achr11P...	AT5G14250.1	12724535
AT2G39940.1	GSMUA_AchrUn_...	AT5G14250.1	12724535
AT2G39940.1	GSMUA_Achr8P31220_001	AT5G42970.1	12724535
AT2G39940.1	GSMUA_Achr9P19410_001	AT5G42970.1	12724535
AT2G39940.1	GSMUA_Achr2P06520_001	AT5G63110.1	12445118
AT2G39940.1	GSMUA_AchrUn_...	AT5G63110.1	12445118

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P33630_001	Banana	cytosol, mitochondrion, nucleus	68.02	20.07
GSMUA_Achr5P28930_001	Banana	cytosol	65.12	20.0
GSMUA_Achr9P03690_001	Banana	cytosol	66.28	18.91
KRH14993	Soybean	cytosol	58.14	17.61
TraesCS4D01G214200.1	Wheat	cytosol	59.88	17.58
TraesCS4A01G091200.1	Wheat	cytosol	59.88	17.58
TraesCS4B01G213500.1	Wheat	cytosol	59.3	17.41
HORVU4Hr1G060950.3	Barley	cytosol	59.3	17.41
VIT_13s0019g03380.t01	Wine grape	cytosol	59.88	17.22
Os03t0265500-01	Rice	plasma membrane	58.72	17.15
KRH31107	Soybean	cytosol	58.14	16.95
TraesCS1A01G279100.1	Wheat	cytosol	58.14	16.89
TraesCS1B01G288100.1	Wheat	cytosol	58.14	16.89
TraesCS1D01G278400.1	Wheat	cytosol	58.14	16.89
TraesCS3A01G367500.1	Wheat	cytosol	54.65	16.88
EES18318	Sorghum	cytosol	58.72	16.86
KRH73146	Soybean	cytosol	56.98	16.78
KRG97777	Soybean	cytosol	57.56	16.78
EER95129	Sorghum	cytosol	57.56	16.75
EES01769	Sorghum	cytosol	57.56	16.61
Os05t0449500-01	Rice	cytosol	57.56	16.58
Zm00001d012338_P001	Maize	cytosol	56.98	16.44
Bra000156.1-P	Field mustard	cytosol	56.4	16.44
Zm00001d028543_P001	Maize	cytosol	56.4	16.41
HORVU1Hr1G073230.1	Barley	cytosol	56.4	16.41
Zm00001d042833_P001	Maize	cytosol	56.98	16.39
Zm00001d010082_P001	Maize	cytosol	56.98	16.36
Os01t0853400-01	Rice	cytosol	56.4	16.3
CDY24941	Canola	cytosol	55.81	16.27
Zm00001d047848_P001	Maize	cytosol	55.81	16.24
Zm00001d038273_P001	Maize	cytosol	56.4	16.19
HORVU3Hr1G085210.2	Barley	cytosol	55.23	15.99
CDX93223	Canola	cytosol	54.65	15.91
AT2G39940.1	Thale cress	cytosol	54.65	15.88
CDX74819	Canola	cytosol	55.23	15.83
TraesCS3B01G399200.1	Wheat	cytosol	54.65	15.82
TraesCS3D01G360400.2	Wheat	cytosol	54.65	15.8
CDY20501	Canola	cytosol	55.23	15.78
Bra005000.1-P	Field mustard	cytosol	55.23	15.75
CDY07041	Canola	cytosol	54.07	15.71
CDX93225	Canola	cytosol	54.07	15.66
Solyc05g052620.2.1	Tomato	cytosol	54.07	15.42
CDY07040	Canola	cytosol	54.07	15.32
Bra017045.1-P	Field mustard	cytosol	54.07	15.32
Bra017044.1-P	Field mustard	cytosol	53.49	15.23
CDY60996	Canola	endoplasmic reticulum, golgi	56.4	13.8
GSMUA_Achr3P23850_001	Banana	cytosol	33.14	9.79
GSMUA_Achr6P08000_001	Banana	cytosol	26.74	8.63
GSMUA_AchrUn_...	Banana	cytosol	26.16	8.44
GSMUA_Achr6P16510_001	Banana	cytosol	25.58	8.26
GSMUA_Achr10P...	Banana	cytosol	25.0	8.07
GSMUA_Achr9P01140_001	Banana	cytosol	25.0	8.07
GSMUA_Achr3P06710_001	Banana	cytosol	23.26	6.98
GSMUA_Achr7P11780_001	Banana	cytosol	23.84	6.95
GSMUA_Achr5P05520_001	Banana	cytosol	22.67	6.64
GSMUA_Achr5P26930_001	Banana	cytosol	12.21	4.53
GSMUA_Achr6P20580_001	Banana	cytosol	11.05	3.8

Protein Annotations

EnsemblPlants:GSMUA_Achr8P02350_001	EnsemblPlants:GSMUA_Achr8T02350_001	EnsemblPlantsGene:GSMUA_Achr8G02350_001	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	InterPro:IPR032675
InterPro:LRR_dom_sf	PANTHER:PTHR43944	PANTHER:PTHR43944:SF6	SEG:seg	UniParc:UPI0002968F7E	UniProt:M0TLY7
MapMan:35.1	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G02350_001]

Coordinates

chr8:+:1726220..1729331

Molecular Weight (calculated)

20001.6 Da

IEP (calculated)

10.049

GRAVY (calculated)

-0.283

Length

172 amino acids

Sequence
(BLAST)

001: MGYIEDPRDR EAISLVCRRW YHVDALSRKH VTITICYSTS PDRVRRRFPK LESLKLNGKP RASMFNLIPE DWGGYAGPWV HGIAEALSCL KTIYFRRMIV
101: RDDDIGVLVR ARGDKLKSLK LDKCSEFSMD SLNWSPVLAK TSQHCSWKKA QLLRMTMDGF MRLLSTILCW RC

Best Arabidopsis Sequence Match ( AT2G39940.1 )
(BLAST)

001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI

Arabidopsis Description

COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.