Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18318 | Sorghum | cytosol | 94.99 | 94.99 |
| Zm00001d038273_P001 | Maize | cytosol | 93.49 | 93.49 |
| Os05t0449500-01 | Rice | cytosol | 86.14 | 86.43 |
| TraesCS1D01G278400.1 | Wheat | cytosol | 83.47 | 84.46 |
| TraesCS1B01G288100.1 | Wheat | cytosol | 82.97 | 83.95 |
| HORVU1Hr1G073230.1 | Barley | cytosol | 82.64 | 83.76 |
| TraesCS1A01G279100.1 | Wheat | cytosol | 82.64 | 83.61 |
| Zm00001d012338_P001 | Maize | cytosol | 79.8 | 80.2 |
| Zm00001d042833_P001 | Maize | cytosol | 78.46 | 78.6 |
| GSMUA_Achr6P33630_001 | Banana | cytosol, mitochondrion, nucleus | 66.28 | 68.1 |
| GSMUA_Achr5P28930_001 | Banana | cytosol | 62.27 | 66.61 |
| GSMUA_Achr9P03690_001 | Banana | cytosol | 65.44 | 65.01 |
| Zm00001d028543_P001 | Maize | cytosol | 61.6 | 62.44 |
| Zm00001d047848_P001 | Maize | cytosol | 60.77 | 61.59 |
| VIT_13s0019g03380.t01 | Wine grape | cytosol | 60.6 | 60.7 |
| KRG97777 | Soybean | cytosol | 57.26 | 58.14 |
| KRH31107 | Soybean | cytosol | 57.26 | 58.14 |
| GSMUA_Achr8P02350_001 | Banana | cytosol | 16.36 | 56.98 |
| KRH14993 | Soybean | cytosol | 53.92 | 56.87 |
| KRH73146 | Soybean | cytosol | 55.43 | 56.85 |
| CDY24941 | Canola | cytosol | 55.43 | 56.27 |
| Bra000156.1-P | Field mustard | cytosol | 55.26 | 56.1 |
| AT2G39940.1 | Thale cress | cytosol | 55.43 | 56.08 |
| Solyc05g052620.2.1 | Tomato | cytosol | 55.43 | 55.06 |
| CDY20501 | Canola | cytosol | 54.92 | 54.65 |
| Bra005000.1-P | Field mustard | cytosol | 54.76 | 54.39 |
| CDX74819 | Canola | cytosol | 54.42 | 54.33 |
| CDX93225 | Canola | cytosol | 53.76 | 54.21 |
| CDX93223 | Canola | cytosol | 53.42 | 54.15 |
| CDY07041 | Canola | cytosol | 52.75 | 53.38 |
| CDY07040 | Canola | cytosol | 54.09 | 53.38 |
| Bra017045.1-P | Field mustard | cytosol | 53.76 | 53.05 |
| Bra017044.1-P | Field mustard | cytosol | 52.59 | 52.15 |
| CDY60996 | Canola | endoplasmic reticulum, golgi | 55.09 | 46.94 |
| Zm00001d003911_P003 | Maize | cytosol | 30.72 | 32.0 |
| Zm00001d025268_P001 | Maize | cytosol | 30.22 | 31.59 |
| Zm00001d048233_P001 | Maize | cytosol | 30.72 | 30.77 |
| Zm00001d007357_P005 | Maize | cytosol | 29.05 | 30.37 |
| Zm00001d027975_P001 | Maize | cytosol | 30.05 | 30.1 |
| Zm00001d010863_P001 | Maize | plastid | 28.88 | 29.32 |
| Zm00001d018126_P001 | Maize | plastid | 30.88 | 27.82 |
| Zm00001d052188_P001 | Maize | plastid | 30.55 | 27.48 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100284059 | MapMan:11.7.2.1.1 | Gene3D:3.80.10.10 | ProteinID:AQK93403.1 | ProteinID:AQK93404.1 |
| UniProt:B6TPN4 | EMBL:EU966949 | InterPro:F-box-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR43944 | PANTHER:PTHR43944:SF3 | SMART:SM00367 |
| SUPFAM:SSF52047 | SUPFAM:SSF81383 | UniParc:UPI000182E5B9 | EnsemblPlantsGene:Zm00001d010082 | EnsemblPlants:Zm00001d010082_P001 | EnsemblPlants:Zm00001d010082_T001 |
| SEG:seg | : | : | : | : | : |
Description
Coronatine-insensitive protein 1
Coordinates
chr8:+:98725100..98728770
Molecular Weight (calculated)
66577.2 Da
IEP (calculated)
6.625
GRAVY (calculated)
-0.002
Length
599 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGEAPEPRR LTRALSIGGG DGGWVPEEML QLVMGFVEDP RDREAASLVC HRWHRVDALS RKHVTVPFCY AVSPARLLAR FPRLESLAVK GKPRAAMYGL
101: IPDDWGAYAR PWITELAAPL ECLKALHLRR MVVTDDDLAE LVRARGHMLQ ELKLDKCTGF STHGLRLVAR SCRSLRTLFL EECQIDDKGS EWIHDLAVCC
201: PVLTTLNFHM TELEVMPADL KLLAKSCKSL ISLKISDCDL SDLIEFFQFA TALEEFAGGT FNEQGELSKY VNVKFPSRLC SLGLTYMGTN EMPIMFPFSA
301: ILKKLDLQYT FLTTEDHCQL IAKCPNLLVL AVRNVIGDRG LGVVADTCKK LQRLRIERGD DEGGVQEEQG GVSQVGLTAI AVGCRELEYI AAYVSDITNG
401: ALESIGTFCK KLYDFRLVLL DREERITDLP LDNGVRALLR GCTKLRRFAL YLRPGGLSDA GLGYIGQCSG NIQYMLLGNV GETDDGLISF ALGCVNLRKL
501: ELRSCCFSER ALALAILHMP SLRYVWVQGY KASQTGRDLM LMARPFWNIE FTPPNPKNGG WLMEDGEPCV DSHAQILAYH SLAGKRLDCP QSVVPLYPA
101: IPDDWGAYAR PWITELAAPL ECLKALHLRR MVVTDDDLAE LVRARGHMLQ ELKLDKCTGF STHGLRLVAR SCRSLRTLFL EECQIDDKGS EWIHDLAVCC
201: PVLTTLNFHM TELEVMPADL KLLAKSCKSL ISLKISDCDL SDLIEFFQFA TALEEFAGGT FNEQGELSKY VNVKFPSRLC SLGLTYMGTN EMPIMFPFSA
301: ILKKLDLQYT FLTTEDHCQL IAKCPNLLVL AVRNVIGDRG LGVVADTCKK LQRLRIERGD DEGGVQEEQG GVSQVGLTAI AVGCRELEYI AAYVSDITNG
401: ALESIGTFCK KLYDFRLVLL DREERITDLP LDNGVRALLR GCTKLRRFAL YLRPGGLSDA GLGYIGQCSG NIQYMLLGNV GETDDGLISF ALGCVNLRKL
501: ELRSCCFSER ALALAILHMP SLRYVWVQGY KASQTGRDLM LMARPFWNIE FTPPNPKNGG WLMEDGEPCV DSHAQILAYH SLAGKRLDCP QSVVPLYPA
001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI
Arabidopsis Description
COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.