Factsheet for Zm00001d018126_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d033980_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24390.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT4G24390.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT4G24390.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT4G24390.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT4G24390.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT4G24390.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT4G24390.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT4G24390.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT4G24390.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT4G24390.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT4G24390.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052188_P001	Maize	plastid	93.83	93.69
EES05842	Sorghum	plastid	92.48	92.9
Os02t0759700-01	Rice	cytosol	81.05	84.62
TraesCS6B01G345800.1	Wheat	plastid	79.55	82.02
HORVU4Hr1G080360.1	Barley	cytosol, peroxisome, plastid	42.11	81.63
TraesCS6A01G315300.1	Wheat	plastid	79.4	81.61
TraesCS6D01G294600.1	Wheat	plastid	79.25	81.33
HORVU6Hr1G077570.1	Barley	mitochondrion	76.39	80.89
HORVU4Hr1G015730.1	Barley	cytosol, peroxisome, plastid	40.6	80.84
GSMUA_Achr3P06710_001	Banana	cytosol	60.45	70.16
GSMUA_Achr5P05520_001	Banana	cytosol	60.3	68.31
VIT_18s0001g07120.t01	Wine grape	cytosol	59.4	66.5
KRH62206	Soybean	cytosol	56.09	63.98
KRH52925	Soybean	cytosol	55.34	62.69
CDY03450	Canola	cytosol	56.24	61.31
Bra013798.1-P	Field mustard	cytosol	55.79	61.12
KRH72427	Soybean	cytosol	57.74	60.95
CDY34286	Canola	cytosol	55.64	60.76
Solyc04g074980.2.1	Tomato	cytosol	56.84	60.67
PGSC0003DMT400005419	Potato	cytosol	55.79	60.52
Bra000604.1-P	Field mustard	cytosol, plastid	55.19	60.46
CDY21439	Canola	cytosol	54.89	60.43
KRH16819	Soybean	cytosol	57.89	60.16
CDX83172	Canola	cytosol, plastid	54.89	60.13
AT4G24390.1	Thale cress	cytosol, plastid	56.24	60.03
AT5G49980.1	Thale cress	nucleus	55.64	59.77
Zm00001d027975_P001	Maize	cytosol	50.68	56.35
Zm00001d048233_P001	Maize	cytosol	50.68	56.35
Zm00001d003911_P003	Maize	cytosol	41.05	47.48
Zm00001d007357_P005	Maize	cytosol	40.15	46.6
Zm00001d025268_P001	Maize	cytosol	40.15	46.6
Zm00001d010863_P001	Maize	plastid	40.9	46.1
Zm00001d042833_P001	Maize	cytosol	27.97	31.1
Zm00001d038273_P001	Maize	cytosol	27.97	31.05
Zm00001d010082_P001	Maize	cytosol	27.82	30.88
Zm00001d012338_P001	Maize	cytosol	27.52	30.7
Zm00001d047848_P001	Maize	cytosol	26.77	30.12
Zm00001d028543_P001	Maize	cytosol	26.47	29.78

Protein Annotations

EnsemblPlants:Zm00001d018126_P001	EnsemblPlants:Zm00001d018126_T001	EnsemblPlantsGene:Zm00001d018126	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR43944	PANTHER:PTHR43944:SF8	ProteinID:AQK75080.1	SEG:seg
SMART:SM00367	SUPFAM:SSF52047	UniParc:UPI0002210A60	UniProt:A0A1D6HKX9	MapMan:11.2.2.1.1	MapMan:19.2.2.8.1.4.6

Description

F-box protein FBX14

Coordinates

chr5:+:214779470..214783034

Molecular Weight (calculated)

72844.8 Da

IEP (calculated)

5.252

GRAVY (calculated)

-0.101

Length

665 amino acids

Sequence
(BLAST)

001: MSTPHSSSTS SVPHRASAPQ IPQSLTLAPP TACSASPSSS FSSSSASGMR DAGEDDDSDS PPSQMSEDDP GAGAGDRWEP DLRGGGGRRA PPDQVLGNVL
101: ETVLQFLTAA RDRNAASLVC RSWYQAEAQT RRELFIGNCY AVSPRRAVER FGGLRAVVLK GKPRFADFSL VPYGWGAYVS PWVAALGPAY PCLERICLKR
201: MTVSDDDLAL VATSFPCFRD LSLVCCDGFS TLGLAVVAER CRHLRVLDLI EDYVEDDEDE LVDWISKFPE CNTSLESLVF DCVSVPFNFE ALEALVARSP
301: ALRQLRVNHH VSVEQLRRLM ARAPQLTHFG TGAFRSEGAP GGGLAVTELA TSFAASRSLI CLSGFREVDP EYLPAIYPVC AKLTSLNFSF ASLTAAELKP
401: VIRNCTNLRT FWVLDTVGDE GLRAVADACS DLRELRVFPL DASEDSEGSV SDVGLEAISK GCRKLESILY FCQRMTNAAV IDMSKNCPEL VVFRLCIMGR
501: HRPDRVTGEP MDEGFGAIVM NCKKLTRLSV SGLLTDKAFA HIGKHGKLIK TLSVAFAGNS DMSLQYVFEG CTKLQKLEVR DSPFSDRGLL SGLDYFYNMR
601: FLWMNSCRLT MRGCRDVARQ MQNLVVEVIK DHSEDEGEGE TVDKLYLYRS LAGPRDDAPP FVTLL

Best Arabidopsis Sequence Match ( AT4G24390.2 )
(BLAST)

001: MTEEDSSAKM SEDVEKYLNL NPPCSSSSSS SSAATFTNKS RNFKSSPPPC PDHVLENVLE NVLQFLTSRC DRNAVSLVCR SWYRVEAQTR LEVFIGNCYS
101: LSPARLIHRF KRVRSLVLKG KPRFADFNLM PPNWGAQFSP WVAATAKAYP WLEKVHLKRM FVTDDDLALL AESFPGFKEL TLVCCEGFGT SGIAIVANKC
201: RQLKVLDLME SEVTDDELDW ISCFPEGETH LESLSFDCVE SPINFKALEE LVVRSPFLKK LRTNRFVSLE ELHRLMVRAP QLTSLGTGSF SPDNVPQGEQ
301: QPDYAAAFRA CKSIVCLSGF REFRPEYLLA ISSVCANLTS LNFSYANISP HMLKPIISNC HNIRVFWALD SIRDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSGVGL QAISEGCRKL ESILYFCQNM TNGAVTAMSE NCPQLTVFRL CIMGRHRPDH VTGKPMDDGF GAIVKNCKKL TRLAVSGLLT DEAFSYIGEY
501: GKLIRTLSVA FAGNSDKALR YVLEGCPKLQ KLEIRDSPFG DVGLRSGMHR YSNMRFVWLS SCLISRGGCR GVSHALPNVV VEVFGADGDD DEDTVTGDYV
601: ETLYLYRSLD GPRKDAPKFV TIL

Arabidopsis Description

FBX14F-box protein FBX14 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWQ8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.