Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G294600.1 | Wheat | plastid | 97.84 | 97.69 |
| TraesCS6B01G345800.1 | Wheat | plastid | 96.29 | 96.59 |
| HORVU4Hr1G080360.1 | Barley | cytosol, peroxisome, plastid | 50.23 | 94.75 |
| HORVU4Hr1G015730.1 | Barley | cytosol, peroxisome, plastid | 48.22 | 93.41 |
| HORVU6Hr1G077570.1 | Barley | mitochondrion | 90.57 | 93.31 |
| Os02t0759700-01 | Rice | cytosol | 83.77 | 85.09 |
| EES05842 | Sorghum | plastid | 83.62 | 81.72 |
| Zm00001d052188_P001 | Maize | plastid | 82.69 | 80.33 |
| Zm00001d018126_P001 | Maize | plastid | 81.61 | 79.4 |
| TraesCS7A01G176200.1 | Wheat | cytosol | 75.42 | 78.21 |
| GSMUA_Achr3P06710_001 | Banana | cytosol | 60.43 | 68.24 |
| VIT_18s0001g07120.t01 | Wine grape | cytosol | 61.21 | 66.67 |
| GSMUA_Achr5P05520_001 | Banana | cytosol | 59.66 | 65.76 |
| KRH62206 | Soybean | cytosol | 57.03 | 63.29 |
| KRH52925 | Soybean | cytosol | 56.72 | 62.52 |
| PGSC0003DMT400005419 | Potato | cytosol | 57.5 | 60.69 |
| CDY03450 | Canola | cytosol | 57.19 | 60.66 |
| Solyc04g074980.2.1 | Tomato | cytosol | 58.27 | 60.51 |
| Bra013798.1-P | Field mustard | cytosol | 56.72 | 60.46 |
| CDY34286 | Canola | cytosol | 56.88 | 60.43 |
| AT4G24390.1 | Thale cress | cytosol, plastid | 57.81 | 60.03 |
| Bra000604.1-P | Field mustard | cytosol, plastid | 56.26 | 59.97 |
| CDY21439 | Canola | cytosol | 55.95 | 59.93 |
| KRH72427 | Soybean | cytosol | 58.27 | 59.84 |
| AT5G49980.1 | Thale cress | nucleus | 57.19 | 59.77 |
| CDX83172 | Canola | cytosol, plastid | 55.95 | 59.64 |
| KRH16819 | Soybean | cytosol | 58.58 | 59.22 |
| TraesCS4A01G001800.1 | Wheat | cytosol | 53.48 | 56.91 |
| TraesCS2A01G286200.1 | Wheat | cytosol | 43.74 | 49.3 |
| TraesCS5A01G281100.1 | Wheat | cytosol | 43.12 | 49.03 |
| TraesCS1A01G091300.1 | Wheat | cytosol | 42.5 | 46.45 |
| TraesCS3A01G367500.1 | Wheat | cytosol | 27.51 | 31.96 |
| TraesCS1A01G279100.1 | Wheat | cytosol | 28.13 | 30.74 |
| TraesCS4A01G091200.1 | Wheat | cytosol | 27.67 | 30.55 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G315300.1 | EnsemblPlantsGene:TraesCS6A01G315300 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR43944 | PANTHER:PTHR43944:SF8 | SEG:seg | SMART:SM00367 | SUPFAM:SSF52047 |
| MapMan:11.2.2.1.1 | MapMan:19.2.2.8.1.4.6 | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:551864790..551867299
Molecular Weight (calculated)
70857.7 Da
IEP (calculated)
5.450
GRAVY (calculated)
-0.079
Length
647 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAPPSSSPS PAPIPQPAAT LAPASMRGAA ADDDSSGSSP SRMSEDDDDG DGGAGRGDRW APDLRGGNGN GGRWAPPDQV LENVLESVLE FLTAARDRNA
101: ASLVCRSWYR AEAQTRRELF IGNCYAVSPR RAVERFGGVR AVVLKGKPRF ADFSLVPHGW GAYVSPWVAA LGPAYPRLER ICLKRMTVSD DELALIPKSF
201: PLFKELSLVC CDGFTTRGLA VIAEGCRHLR VLDLTEDYFH EEESEVVDWI SKFPESNTSL ESLVFDCVSV PFNFEALEAL VARSPALRRL RVNDHVSIEQ
301: LRRLMARAPH LTHLGTGSFR SEPGPGGALS VSELATSFAA SRSLVCLSGF LDANAAYLPA IYQVCANLTS LNFSFAGLTD EEFIPVIRHC INLRTLWVLD
401: TVGDEGLRAV AETCSNLREL RVFPLDATED SEGSVSDIGL QAISEGCRKL ESILYFCQRM TNAAVIAMSE NCPDLLVFRL CIMGRHRPDR ITGAPMDEGF
501: GAIVMNCKKL TRLSVSGLLT DKAFAYIGRH GKLIKTLSVA FAGNSDMSLQ HVFEGCTRLQ KLEVRDSPFG DKGLLSGLNY FYNMRFFWMN SCRLTVKGCG
601: DVAQQMPNLV VEVMKENEGE MDTVDKLYLY RSLAGPREDA PSFVNIL
101: ASLVCRSWYR AEAQTRRELF IGNCYAVSPR RAVERFGGVR AVVLKGKPRF ADFSLVPHGW GAYVSPWVAA LGPAYPRLER ICLKRMTVSD DELALIPKSF
201: PLFKELSLVC CDGFTTRGLA VIAEGCRHLR VLDLTEDYFH EEESEVVDWI SKFPESNTSL ESLVFDCVSV PFNFEALEAL VARSPALRRL RVNDHVSIEQ
301: LRRLMARAPH LTHLGTGSFR SEPGPGGALS VSELATSFAA SRSLVCLSGF LDANAAYLPA IYQVCANLTS LNFSFAGLTD EEFIPVIRHC INLRTLWVLD
401: TVGDEGLRAV AETCSNLREL RVFPLDATED SEGSVSDIGL QAISEGCRKL ESILYFCQRM TNAAVIAMSE NCPDLLVFRL CIMGRHRPDR ITGAPMDEGF
501: GAIVMNCKKL TRLSVSGLLT DKAFAYIGRH GKLIKTLSVA FAGNSDMSLQ HVFEGCTRLQ KLEVRDSPFG DKGLLSGLNY FYNMRFFWMN SCRLTVKGCG
601: DVAQQMPNLV VEVMKENEGE MDTVDKLYLY RSLAGPREDA PSFVNIL
001: MTQDRSEMSE DDDDQQSPPL DLPSTAIADP CSSSSSPNKS RNCISNSQTF PDHVLENVLE NVLQFLDSRC DRNAASLVCK SWWRVEALTR SEVFIGNCYA
101: LSPARLTQRF KRVRSLVLKG KPRFADFNLM PPDWGANFAP WVSTMAQAYP CLEKVDLKRM FVTDDDLALL ADSFPGFKEL ILVCCEGFGT SGISIVANKC
201: RKLKVLDLIE SEVTDDEVDW ISCFPEDVTC LESLAFDCVE APINFKALEG LVARSPFLKK LRLNRFVSLV ELHRLLLGAP QLTSLGTGSF SHDEEPQSEQ
301: EPDYAAAFRA CKSVVCLSGF RELMPEYLPA IFPVCANLTS LNFSYANISP DMFKPIILNC HKLQVFWALD SICDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSELGL QAISEGCRKL ESILYFCQRM TNAAVIAMSE NCPELTVFRL CIMGRHRPDH VTGKPMDEGF GAIVKNCKKL TRLAVSGLLT DQAFRYMGEY
501: GKLVRTLSVA FAGDSDMALR HVLEGCPRLQ KLEIRDSPFG DVALRSGMHR YYNMRFVWMS ACSLSKGCCK DIARAMPNLV VEVIGSDDDD DNRDYVETLY
601: MYRSLDGPRN DAPKFVTIL
101: LSPARLTQRF KRVRSLVLKG KPRFADFNLM PPDWGANFAP WVSTMAQAYP CLEKVDLKRM FVTDDDLALL ADSFPGFKEL ILVCCEGFGT SGISIVANKC
201: RKLKVLDLIE SEVTDDEVDW ISCFPEDVTC LESLAFDCVE APINFKALEG LVARSPFLKK LRLNRFVSLV ELHRLLLGAP QLTSLGTGSF SHDEEPQSEQ
301: EPDYAAAFRA CKSVVCLSGF RELMPEYLPA IFPVCANLTS LNFSYANISP DMFKPIILNC HKLQVFWALD SICDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSELGL QAISEGCRKL ESILYFCQRM TNAAVIAMSE NCPELTVFRL CIMGRHRPDH VTGKPMDEGF GAIVKNCKKL TRLAVSGLLT DQAFRYMGEY
501: GKLVRTLSVA FAGDSDMALR HVLEGCPRLQ KLEIRDSPFG DVALRSGMHR YYNMRFVWMS ACSLSKGCCK DIARAMPNLV VEVIGSDDDD DNRDYVETLY
601: MYRSLDGPRN DAPKFVTIL
Arabidopsis Description
AFB5AFB5 [Source:UniProtKB/TrEMBL;Acc:A0A178UB83]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.