CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
KXG37587
KXG37588
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24390.1	EES01631	AT2G41090.1	17360592
AT4G24390.1	EES09201	AT2G41090.1	17360592
AT4G24390.1	EES16322	AT2G41090.1	17360592
AT4G24390.1	OQU78227	AT2G41090.1	17360592
AT4G24390.1	EES01631	AT2G41100.1	17360592
AT4G24390.1	EES09201	AT2G41100.1	17360592
AT4G24390.1	EES16322	AT2G41100.1	17360592
AT4G24390.1	OQU78227	AT2G41100.1	17360592
AT4G24390.1	KXG37587	AT4G14640.1	17360592
AT4G24390.1	KXG37588	AT4G14640.1	17360592
AT4G24390.1	EES01631	AT5G21274.1	17360592
AT4G24390.1	EES09201	AT5G21274.1	17360592
AT4G24390.1	EES16322	AT5G21274.1	17360592
AT4G24390.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052188_P001	Maize	plastid	94.41	93.84
Zm00001d018126_P001	Maize	plastid	92.9	92.48
Os02t0759700-01	Rice	cytosol	83.08	86.34
TraesCS6A01G315300.1	Wheat	plastid	81.72	83.62
TraesCS6B01G345800.1	Wheat	plastid	81.42	83.57
TraesCS6D01G294600.1	Wheat	plastid	81.42	83.18
HORVU6Hr1G077570.1	Barley	mitochondrion	77.95	82.17
HORVU4Hr1G080360.1	Barley	cytosol, peroxisome, plastid	42.15	81.34
HORVU4Hr1G015730.1	Barley	cytosol, peroxisome, plastid	40.33	79.94
GSMUA_Achr3P06710_001	Banana	cytosol	61.03	70.51
GSMUA_Achr5P05520_001	Banana	cytosol	60.73	68.48
VIT_18s0001g07120.t01	Wine grape	cytosol	60.73	67.68
KRH62206	Soybean	cytosol	56.04	63.64
KRH52925	Soybean	cytosol	55.89	63.03
CDY03450	Canola	cytosol	56.8	61.64
Solyc04g074980.2.1	Tomato	cytosol	57.7	61.32
Bra013798.1-P	Field mustard	cytosol	56.19	61.28
PGSC0003DMT400005419	Potato	cytosol	56.65	61.17
Bra000604.1-P	Field mustard	cytosol, plastid	55.89	60.96
CDY21439	Canola	cytosol	55.59	60.93
CDY34286	Canola	cytosol	56.04	60.92
KRH72427	Soybean	cytosol	57.85	60.79
CDX83172	Canola	cytosol, plastid	55.59	60.63
AT4G24390.1	Thale cress	cytosol, plastid	56.95	60.51
KRH16819	Soybean	cytosol	58.46	60.47
AT5G49980.1	Thale cress	nucleus	56.34	60.26
EER92735	Sorghum	cytosol	51.06	56.15
EES09791	Sorghum	cytosol	41.84	47.92
KXG21312	Sorghum	plastid	41.69	46.7
KXG26136	Sorghum	cytosol	41.54	46.37
EES18318	Sorghum	cytosol	28.7	31.72
EES01769	Sorghum	cytosol	27.79	30.87
EER95129	Sorghum	cytosol	27.34	30.63

Protein Annotations

EnsemblPlants:EES05842	EnsemblPlantsGene:SORBI_3004G305400	EntrezGene:8075184	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR43944	PANTHER:PTHR43944:SF8	ProteinID:EES05842	ProteinID:EES05842.1
ProteinID:OQU85777.1	RefSeq:XP_002452866.1	SEG:seg	SMART:SM00367	SUPFAM:SSF52047	unigene:Sbi.12117
UniParc:UPI0001A8596D	UniProt:C5XSR6	MapMan:11.2.2.1.1	MapMan:19.2.2.8.1.4.6	:	:

Description

hypothetical protein

Coordinates

chr4:+:64390011..64393733

Molecular Weight (calculated)

72844.9 Da

IEP (calculated)

5.265

GRAVY (calculated)

-0.120

Length

662 amino acids

Sequence
(BLAST)

001: MSTPHSSSTS SVPHRASPPQ IPPSLTLAPT ASSASPSSSS ASGMRDAAED DSDSPPSQMS EDDPGGGGDR WEPDLRGGNN GGGGRWAPPD QVLENVLETV
101: LEFLTAARDR NAASLVCRSW YRAEAQTRRE LFIGNCYAVS PRRAVERFGG LRAVVLKGKP RFADFSLVPY GWGAYVSPWV AALGPAYPRL ERICLKRMTV
201: SDDDLALIAK SFPLFRELSL VCCDGFSTVG LAVIVERCRH LRVLDLIEDY LEDEEDELVD WISKFSESNT SLESLVFDCV SVPFNFEALE ALVARSPALR
301: RLRVNHHVSV EQLRRLMARA PQLTHFGTGA FRSEGAPDGG LAVTELATSF AAARSLVCLS GFREVDPQYL PAIYPVCAKL TSLNFSFASL TAAELKPVIR
401: NCTNLRTFWV LDTVGDEGLR AVADTCSDLR ELRVFPLDAS EDSEGSVSDV GLQAISEGCR KLESILYFCQ RMTNEAVIAM SKNCPELVAF RLCIMGRHRP
501: DRVTGDPMDE GFGAIVMNCK KLTRLSVSGL LTDKAFAYIG KYGKLIKTLS VAFAGNSDMS LQYVFEGCTK LQKLEVRDSP FTDRGLLSGL NYFYNMRFLW
601: MNSCRLTMRG CKDVAQQMQN LVVEVIKDHS EDEGEAEIVD KLYLYRSLAG PRNDAPPFVT LL

Best Arabidopsis Sequence Match ( AT4G24390.2 )
(BLAST)

001: MTEEDSSAKM SEDVEKYLNL NPPCSSSSSS SSAATFTNKS RNFKSSPPPC PDHVLENVLE NVLQFLTSRC DRNAVSLVCR SWYRVEAQTR LEVFIGNCYS
101: LSPARLIHRF KRVRSLVLKG KPRFADFNLM PPNWGAQFSP WVAATAKAYP WLEKVHLKRM FVTDDDLALL AESFPGFKEL TLVCCEGFGT SGIAIVANKC
201: RQLKVLDLME SEVTDDELDW ISCFPEGETH LESLSFDCVE SPINFKALEE LVVRSPFLKK LRTNRFVSLE ELHRLMVRAP QLTSLGTGSF SPDNVPQGEQ
301: QPDYAAAFRA CKSIVCLSGF REFRPEYLLA ISSVCANLTS LNFSYANISP HMLKPIISNC HNIRVFWALD SIRDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSGVGL QAISEGCRKL ESILYFCQNM TNGAVTAMSE NCPQLTVFRL CIMGRHRPDH VTGKPMDDGF GAIVKNCKKL TRLAVSGLLT DEAFSYIGEY
501: GKLIRTLSVA FAGNSDKALR YVLEGCPKLQ KLEIRDSPFG DVGLRSGMHR YSNMRFVWLS SCLISRGGCR GVSHALPNVV VEVFGADGDD DEDTVTGDYV
601: ETLYLYRSLD GPRKDAPKFV TIL

Arabidopsis Description

FBX14F-box protein FBX14 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWQ8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.