Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010649_P001 | Maize | extracellular | 67.6 | 85.21 |
| Os05t0491000-01 | Rice | cytosol | 63.69 | 73.55 |
| TraesCS1D01G308000.1 | Wheat | cytosol | 60.89 | 72.67 |
| HORVU0Hr1G001280.1 | Barley | cytosol | 60.34 | 71.52 |
| TraesCS1B01G319300.1 | Wheat | cytosol | 59.22 | 70.67 |
| TraesCS1A01G308700.1 | Wheat | cytosol | 59.78 | 70.39 |
| CDX92401 | Canola | cytosol | 36.31 | 48.51 |
| Solyc10g081170.1.1 | Tomato | extracellular | 40.22 | 48.32 |
| Solyc10g077010.1.1 | Tomato | cytosol | 40.22 | 48.32 |
| Solyc11g072240.1.1 | Tomato | cytosol | 40.22 | 48.32 |
| CDY04474 | Canola | cytosol | 40.22 | 48.32 |
| Solyc01g008950.2.1 | Tomato | nucleus | 40.22 | 48.32 |
| PGSC0003DMT400070437 | Potato | cytosol | 40.22 | 48.32 |
| PGSC0003DMT400058435 | Potato | cytosol | 40.22 | 48.32 |
| CDY56411 | Canola | cytosol | 40.22 | 48.32 |
| Solyc12g099990.1.1 | Tomato | nucleus | 40.22 | 48.32 |
| Bra020155.1-P | Field mustard | cytosol | 40.22 | 48.32 |
| Bra019453.1-P | Field mustard | cytosol | 40.22 | 48.32 |
| Bra012037.1-P | Field mustard | cytosol | 40.22 | 48.32 |
| VIT_08s0040g00470.t01 | Wine grape | cytosol | 40.22 | 48.32 |
| Bra006595.1-P | Field mustard | cytosol | 40.22 | 48.32 |
| KRG94975 | Soybean | nucleus | 40.22 | 48.32 |
| PGSC0003DMT400018569 | Potato | cytosol | 40.22 | 48.32 |
| Bra002368.1-P | Field mustard | cytosol | 40.22 | 48.32 |
| Bra034981.1-P | Field mustard | cytosol | 39.11 | 48.28 |
| CDY12321 | Canola | cytosol | 39.11 | 48.28 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 40.78 | 47.71 |
| Bra014671.1-P | Field mustard | cytosol | 39.66 | 47.65 |
| CDY65072 | Canola | cytosol | 39.66 | 47.65 |
| AT3G56800.1 | Thale cress | cytosol | 39.66 | 47.65 |
| AT5G21274.1 | Thale cress | cytosol | 39.66 | 47.65 |
| Bra000214.1-P | Field mustard | cytosol | 39.66 | 47.65 |
| Bra003251.1-P | Field mustard | cytosol | 39.66 | 47.65 |
| CDY55678 | Canola | cytosol | 39.11 | 46.98 |
| Bra007269.1-P | Field mustard | cytosol | 39.11 | 46.98 |
| PGSC0003DMT400054299 | Potato | cytosol | 29.61 | 46.9 |
| PGSC0003DMT400046278 | Potato | cytosol | 20.11 | 46.75 |
| CDX96148 | Canola | cytosol | 38.55 | 46.31 |
| CDX99690 | Canola | cytosol | 38.55 | 46.31 |
| Bra004166.1-P | Field mustard | cytosol | 38.55 | 46.31 |
| AT2G41110.2 | Thale cress | cytosol | 40.78 | 45.34 |
| CDY27651 | Canola | cytosol | 37.99 | 45.33 |
| Bra025438.1-P | Field mustard | cytosol | 28.49 | 45.13 |
| AT1G66410.2 | Thale cress | cytosol | 38.55 | 43.4 |
| KRH18664 | Soybean | cytosol | 32.96 | 42.14 |
| PGSC0003DMT400014123 | Potato | mitochondrion | 27.93 | 40.98 |
| CDY48191 | Canola | cytosol | 40.22 | 40.22 |
| Bra034317.1-P | Field mustard | cytosol | 40.22 | 40.22 |
| CDX77060 | Canola | cytosol | 40.22 | 40.0 |
| AT5G37780.3 | Thale cress | cytosol | 38.55 | 39.43 |
| AT2G27030.3 | Thale cress | cytosol | 39.66 | 39.23 |
| KRG89812 | Soybean | cytosol, mitochondrion | 35.75 | 38.79 |
| EER90981 | Sorghum | cytosol | 31.28 | 37.58 |
| EES01631 | Sorghum | cytosol | 37.99 | 36.96 |
| EES09201 | Sorghum | cytosol | 35.75 | 35.56 |
| CDY30947 | Canola | cytosol | 41.34 | 35.41 |
| CDX75970 | Canola | cytosol | 22.35 | 35.09 |
| KXG37587 | Sorghum | cytosol | 30.17 | 35.06 |
| PGSC0003DMT400097662 | Potato | cytosol, mitochondrion | 33.52 | 34.68 |
| AT3G43810.2 | Thale cress | cytosol | 40.78 | 34.11 |
| EES16322 | Sorghum | cytosol | 33.52 | 34.09 |
| CDY21220 | Canola | cytosol | 40.78 | 33.03 |
| CDY57144 | Canola | cytosol | 26.82 | 32.88 |
| OQU79799 | Sorghum | cytosol | 24.02 | 29.05 |
| KXG36700 | Sorghum | cytosol | 27.37 | 28.49 |
| EES19997 | Sorghum | plastid | 26.82 | 25.81 |
| AT2G41090.1 | Thale cress | cytosol | 24.58 | 23.04 |
| OQU84270 | Sorghum | cytosol, plastid | 24.58 | 20.09 |
| EES03239 | Sorghum | plastid | 23.46 | 17.8 |
| AT2G41100.1 | Thale cress | cytosol | 28.49 | 15.74 |
| KXG37588 | Sorghum | mitochondrion, nucleus | 1.68 | 2.19 |
Protein Annotations
| EnsemblPlants:OQU78227 | EnsemblPlantsGene:SORBI_3009G179900 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF256 | PFAM:PF13833 |
| PFscan:PS50222 | ProteinID:OQU78227 | ProteinID:OQU78227.1 | SUPFAM:SSF47473 | UniParc:UPI000B8BA014 | UniProt:A0A1Z5R3A4 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:53422980..53423535
Molecular Weight (calculated)
19576.0 Da
IEP (calculated)
4.665
GRAVY (calculated)
-0.473
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEKLTPAQV DECKEIFDLF DADEDGKSPS HPIHRTPIHR TSTETSFFVA PGGGRIAAGD LVTALRSLGQ NVDEAEARRF LEDAGAGAGA TIDLAAFLAL
101: AARKMGARQS EERLAECFDV FDDARTGSIP AEQLRQVMVS HGDRLTEQEA DAMLREADPQ GEGRVEYKQY VKVLLRDKK
101: AARKMGARQS EERLAECFDV FDDARTGSIP AEQLRQVMVS HGDRLTEQEA DAMLREADPQ GEGRVEYKQY VKVLLRDKK
001: MADQLTDDQI SEFKEAFSLF DKDGDGMLHP PFPSIIVGCI TTKELGTVMR SLGQNPTEAE LQDMINEVDA DGNGTIDFPE FLNLMARKMK DTDSEEELKE
101: AFRVFDKDQN GFISAAELRH VMTNLGEKLT DEEVDEMIKE ADVDGDGQIN YEEFVKVMMA K
101: AFRVFDKDQN GFISAAELRH VMTNLGEKLT DEEVDEMIKE ADVDGDGQIN YEEFVKVMMA K
Arabidopsis Description
CAM2Calmodulin 2 [Source:UniProtKB/TrEMBL;Acc:F4IJ46]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.