Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043395_P002 | Maize | nucleus | 77.18 | 78.09 |
| TraesCS3D01G295500.1 | Wheat | nucleus | 57.12 | 58.05 |
| Os01t0758900-01 | Rice | nucleus | 56.83 | 57.33 |
| TraesCS3B01G330200.2 | Wheat | cytosol, nucleus, plastid | 55.81 | 53.86 |
| TraesCS3A01G306400.2 | Wheat | nucleus | 54.65 | 53.41 |
| GSMUA_Achr9P06400_001 | Banana | nucleus | 29.22 | 30.23 |
| GSMUA_Achr1P04800_001 | Banana | nucleus | 22.24 | 29.37 |
| Solyc07g055140.2.1 | Tomato | nucleus | 14.68 | 28.69 |
| GSMUA_Achr6P26820_001 | Banana | nucleus | 26.89 | 28.2 |
| KRH22276 | Soybean | nucleus | 6.69 | 27.71 |
| KRH04495 | Soybean | nucleus | 11.92 | 26.28 |
| KRH74883 | Soybean | nucleus | 11.77 | 26.13 |
| CDY43328 | Canola | nucleus | 18.46 | 24.85 |
| CDX90178 | Canola | nucleus | 18.02 | 24.36 |
| CDY15640 | Canola | mitochondrion, nucleus, plastid | 15.84 | 23.9 |
| VIT_12s0028g02110.t01 | Wine grape | nucleus | 23.55 | 23.89 |
| Bra030129.1-P | Field mustard | mitochondrion, nucleus, plastid | 16.72 | 23.66 |
| Bra021994.1-P | Field mustard | nucleus | 13.95 | 23.36 |
| CDX94655 | Canola | mitochondrion | 16.42 | 23.25 |
| Bra010842.1-P | Field mustard | nucleus | 17.44 | 22.99 |
| KRH11026 | Soybean | nucleus | 22.38 | 22.75 |
| AT1G29240.1 | Thale cress | nucleus | 18.75 | 22.36 |
| CDY53997 | Canola | plastid | 13.66 | 22.33 |
| CDY06031 | Canola | nucleus | 14.1 | 22.2 |
| PGSC0003DMT400052652 | Potato | nucleus | 18.75 | 21.94 |
| Bra012583.1-P | Field mustard | plastid | 14.39 | 21.9 |
| KRH27055 | Soybean | nucleus | 17.73 | 21.75 |
| CDY63140 | Canola | nucleus | 15.41 | 21.68 |
| KRH58978 | Soybean | nucleus | 21.08 | 21.67 |
| AT2G30990.4 | Thale cress | nucleus | 18.6 | 21.59 |
| CDY01559 | Canola | nucleus, plastid | 13.95 | 21.52 |
| AT4G18630.1 | Thale cress | nucleus | 14.97 | 21.5 |
| CDY52694 | Canola | nucleus | 14.68 | 21.49 |
| CDY17227 | Canola | nucleus | 15.26 | 21.43 |
| KRH42875 | Soybean | nucleus | 20.78 | 21.19 |
| CDY58982 | Canola | nucleus | 16.42 | 21.12 |
| Bra021686.1-P | Field mustard | nucleus | 16.42 | 21.12 |
| PGSC0003DMT400039770 | Potato | cytosol | 17.59 | 21.12 |
| CDX87761 | Canola | nucleus | 13.23 | 21.02 |
| Solyc12g013960.1.1 | Tomato | nucleus | 18.6 | 20.85 |
| CDX99449 | Canola | nucleus | 14.24 | 20.76 |
| AT2G34170.3 | Thale cress | nucleus | 15.7 | 20.65 |
| Bra013335.1-P | Field mustard | nucleus | 13.95 | 20.21 |
| CDX78880 | Canola | nucleus | 13.95 | 20.13 |
| PGSC0003DMT400026504 | Potato | nucleus | 20.2 | 20.03 |
| Solyc02g076680.2.1 | Tomato | nucleus | 19.91 | 19.71 |
| KRH21261 | Soybean | cytosol, mitochondrion, plastid | 11.34 | 19.7 |
| Bra005448.1-P | Field mustard | nucleus | 14.97 | 19.54 |
| CDX97772 | Canola | extracellular, vacuole | 15.55 | 19.14 |
| AT5G45850.1 | Thale cress | nucleus | 12.35 | 19.1 |
| KRH55736 | Soybean | nucleus | 19.04 | 19.07 |
| CDY10767 | Canola | nucleus | 11.63 | 18.78 |
| KRH25783 | Soybean | nucleus | 18.9 | 18.39 |
| VIT_10s0003g01370.t01 | Wine grape | plastid | 19.62 | 17.05 |
| Bra018284.1-P | Field mustard | nucleus | 11.34 | 16.05 |
Protein Annotations
| EnsemblPlants:EES01501 | EnsemblPlantsGene:SORBI_3003G302100 | EntrezGene:8079224 | InterPro:DUF688 | PANTHER:PTHR33671 | PANTHER:PTHR33671:SF5 |
| PFAM:PF05097 | ProteinID:EES01501 | ProteinID:EES01501.1 | RefSeq:XP_002456381.1 | SEG:seg | unigene:Sbi.4508 |
| UniParc:UPI0001A84A29 | UniProt:C5XKS8 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:63302019..63304736
Molecular Weight (calculated)
74322.4 Da
IEP (calculated)
6.598
GRAVY (calculated)
-0.796
Length
688 amino acids
Sequence
(BLAST)
(BLAST)
001: MRADRAMGDG GGSNQHNQRI DLGAPLRSAR LADAPTPPQY KAGLDSGPLR HPGAVPFAWE QRPGQPKSVR TRRAAPPTPP RETSSWTTRP GEEIGGSSPY
101: HDALGELDLQ ALRGGADRGS RTVVAASRKV VVVVVEDEAA VAAEPTKEVV KKDEALQVAA VLRKQHGEVE DEEDEERFSD ALDTLSRTES FAMNCSVSGL
201: SGVPDPGQGA EPGSRGFMMD RFLPAAQAVA VGSPQYTFRK AGAAVGTGND GREHARAAAV KAGAGNGEDR MRRAPVQLPY QHLPPNYLSC AYPRHEQHEE
301: EDEEDDDGYD VHSTRGFSAK GCGLLPSLCV KTSLLLLNPM PAMKRGKKVR GWQLPCKGRG QMAQSPLARS SQNKHLGCDS NGQSWEGVYK HKLEQKYLGQ
401: GEDGRSKLTS ESNQLTFWSD SPTGDGSSPY YHSIAGGMSP YRSYPVMSPS SKPNRSSGTG DMDDKASRSN GSGSFGKDHD RTSLVGSDHS SFKGSSSMSS
501: GPDGVVHEDS MDHHGDTDSD TCHLGVLVDT KAALNANIYD SQPGRQKIVG RNSIVKDQVN DPLTEKISER SEPTFTLDGG RDLQDDASHE LPQQLEDNNV
601: AKKETIPLQS LLPLPVPKSP SESWLSRTLP SVTNKPPLPS FLGIQVQSKK QAPWVTMQPK ENDHKPPRPR QIRFADVVEK PTSLDSEI
101: HDALGELDLQ ALRGGADRGS RTVVAASRKV VVVVVEDEAA VAAEPTKEVV KKDEALQVAA VLRKQHGEVE DEEDEERFSD ALDTLSRTES FAMNCSVSGL
201: SGVPDPGQGA EPGSRGFMMD RFLPAAQAVA VGSPQYTFRK AGAAVGTGND GREHARAAAV KAGAGNGEDR MRRAPVQLPY QHLPPNYLSC AYPRHEQHEE
301: EDEEDDDGYD VHSTRGFSAK GCGLLPSLCV KTSLLLLNPM PAMKRGKKVR GWQLPCKGRG QMAQSPLARS SQNKHLGCDS NGQSWEGVYK HKLEQKYLGQ
401: GEDGRSKLTS ESNQLTFWSD SPTGDGSSPY YHSIAGGMSP YRSYPVMSPS SKPNRSSGTG DMDDKASRSN GSGSFGKDHD RTSLVGSDHS SFKGSSSMSS
501: GPDGVVHEDS MDHHGDTDSD TCHLGVLVDT KAALNANIYD SQPGRQKIVG RNSIVKDQVN DPLTEKISER SEPTFTLDGG RDLQDDASHE LPQQLEDNNV
601: AKKETIPLQS LLPLPVPKSP SESWLSRTLP SVTNKPPLPS FLGIQVQSKK QAPWVTMQPK ENDHKPPRPR QIRFADVVEK PTSLDSEI
001: MLMGSLMMEE KQLDFNRPLI SIRRPTQTSE SESKTRSFDS VTNMIPPSPP VYKSDIKSGP VRNPGTVPFQ WEHKPGKPKD ERKPVLQSFV EPHFVPKLPP
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
Arabidopsis Description
Protein of unknown function (DUF688) [Source:TAIR;Acc:AT2G30990]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.